BLASTX nr result

ID: Coptis23_contig00019740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019740
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC49885.1| lysine and histidine specific transporter [Arabid...    54   3e-10
ref|NP_851109.1| Lysine histidine transporter 1 [Arabidopsis tha...    54   3e-10
ref|NP_198894.2| Lysine histidine transporter 1 [Arabidopsis tha...    54   3e-10
ref|XP_002870677.1| hypothetical protein ARALYDRAFT_916150 [Arab...    54   3e-10
dbj|BAJ99236.1| predicted protein [Hordeum vulgare subsp. vulgare]     52   4e-10

>gb|AAC49885.1| lysine and histidine specific transporter [Arabidopsis thaliana]
          Length = 446

 Score = 53.5 bits (127), Expect(2) = 3e-10
 Identities = 21/25 (84%), Positives = 24/25 (96%)
 Frame = +3

Query: 3   WLPITSSRSSKWWYSAFHNVTAIYG 77
           WLPITSSR++KWWYSAFHNVTA+ G
Sbjct: 27  WLPITSSRNAKWWYSAFHNVTAMVG 51



 Score = 36.6 bits (83), Expect(2) = 3e-10
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +1

Query: 73  MVGAGVLSLPFAMSELGW 126
           MVGAGVL LP+AMS+LGW
Sbjct: 49  MVGAGVLGLPYAMSQLGW 66


>ref|NP_851109.1| Lysine histidine transporter 1 [Arabidopsis thaliana]
           gi|75262627|sp|Q9FKS8.1|LHT1_ARATH RecName: Full=Lysine
           histidine transporter 1
           gi|14194151|gb|AAK56270.1|AF367281_1 AT5g40780/K1B16_3
           [Arabidopsis thaliana] gi|10177957|dbj|BAB11340.1| amino
           acid permease [Arabidopsis thaliana]
           gi|22137070|gb|AAM91380.1| At5g40780/K1B16_3
           [Arabidopsis thaliana] gi|332007210|gb|AED94593.1|
           Lysine histidine transporter 1 [Arabidopsis thaliana]
          Length = 446

 Score = 53.5 bits (127), Expect(2) = 3e-10
 Identities = 21/25 (84%), Positives = 24/25 (96%)
 Frame = +3

Query: 3   WLPITSSRSSKWWYSAFHNVTAIYG 77
           WLPITSSR++KWWYSAFHNVTA+ G
Sbjct: 27  WLPITSSRNAKWWYSAFHNVTAMVG 51



 Score = 36.6 bits (83), Expect(2) = 3e-10
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +1

Query: 73  MVGAGVLSLPFAMSELGW 126
           MVGAGVL LP+AMS+LGW
Sbjct: 49  MVGAGVLGLPYAMSQLGW 66


>ref|NP_198894.2| Lysine histidine transporter 1 [Arabidopsis thaliana]
           gi|332007211|gb|AED94594.1| Lysine histidine transporter
           1 [Arabidopsis thaliana]
          Length = 445

 Score = 53.5 bits (127), Expect(2) = 3e-10
 Identities = 21/25 (84%), Positives = 24/25 (96%)
 Frame = +3

Query: 3   WLPITSSRSSKWWYSAFHNVTAIYG 77
           WLPITSSR++KWWYSAFHNVTA+ G
Sbjct: 26  WLPITSSRNAKWWYSAFHNVTAMVG 50



 Score = 36.6 bits (83), Expect(2) = 3e-10
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +1

Query: 73  MVGAGVLSLPFAMSELGW 126
           MVGAGVL LP+AMS+LGW
Sbjct: 48  MVGAGVLGLPYAMSQLGW 65


>ref|XP_002870677.1| hypothetical protein ARALYDRAFT_916150 [Arabidopsis lyrata subsp.
           lyrata] gi|297316513|gb|EFH46936.1| hypothetical protein
           ARALYDRAFT_916150 [Arabidopsis lyrata subsp. lyrata]
          Length = 445

 Score = 53.5 bits (127), Expect(2) = 3e-10
 Identities = 21/25 (84%), Positives = 24/25 (96%)
 Frame = +3

Query: 3   WLPITSSRSSKWWYSAFHNVTAIYG 77
           WLPITSSR++KWWYSAFHNVTA+ G
Sbjct: 26  WLPITSSRNAKWWYSAFHNVTAMVG 50



 Score = 36.6 bits (83), Expect(2) = 3e-10
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +1

Query: 73  MVGAGVLSLPFAMSELGW 126
           MVGAGVL LP+AMS+LGW
Sbjct: 48  MVGAGVLGLPYAMSQLGW 65


>dbj|BAJ99236.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 456

 Score = 51.6 bits (122), Expect(2) = 4e-10
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +3

Query: 3   WLPITSSRSSKWWYSAFHNVTAIYG 77
           WLP+T+SR+ KWWYSAFHNVTA+ G
Sbjct: 36  WLPVTASRNGKWWYSAFHNVTAMVG 60



 Score = 38.1 bits (87), Expect(2) = 4e-10
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = +1

Query: 73  MVGAGVLSLPFAMSELGW 126
           MVGAGVL+LP+AMSELGW
Sbjct: 58  MVGAGVLTLPYAMSELGW 75


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