BLASTX nr result

ID: Coptis23_contig00019732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019732
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277045.1| PREDICTED: protein TRANSPARENT TESTA 1 [Viti...   422   e-116
ref|XP_002305556.1| predicted protein [Populus trichocarpa] gi|2...   394   e-107
ref|NP_001241401.1| uncharacterized protein LOC100802773 [Glycin...   389   e-106
ref|XP_003541972.1| PREDICTED: protein TRANSPARENT TESTA 1-like ...   387   e-105
ref|XP_003539466.1| PREDICTED: protein TRANSPARENT TESTA 1-like ...   385   e-105

>ref|XP_002277045.1| PREDICTED: protein TRANSPARENT TESTA 1 [Vitis vinifera]
           gi|147767982|emb|CAN64917.1| hypothetical protein
           VITISV_027337 [Vitis vinifera]
          Length = 347

 Score =  422 bits (1086), Expect = e-116
 Identities = 189/256 (73%), Positives = 210/256 (82%), Gaps = 1/256 (0%)
 Frame = +2

Query: 23  TKCLPLLNRXXXXXXXXXXXXXXXXXXSGIRDEKLEKVTVTLHIGLPNNEG-FDGVTKPL 199
           T+CLPLL+R                  +GI++EKLEKVTV LHIGLP++ G  D   K  
Sbjct: 88  TQCLPLLSRFTETKPLKEEDFGVQKESAGIKEEKLEKVTVALHIGLPSSTGDSDAQNKSF 147

Query: 200 NYNDDEKTIKKSFEGCSLNTEGRFWIPTPAQILHGPTQFSCSVCSKTFNRYNNMQMHMWG 379
           N+ +D++  K SF G S NTE RFWIPTPAQIL GP QF+CS+CSKTFNRYNNMQMHMWG
Sbjct: 148 NFKEDQEPTKTSFHGYSFNTESRFWIPTPAQILVGPMQFACSICSKTFNRYNNMQMHMWG 207

Query: 380 HGSQYRRGPESLKGTQPTTMLKLPCYCCAHGCKNNINHPRAKPLKDFRTLQTHYKRKHGA 559
           HGS+YR+GPESL+G QP  ML+LPCYCCA GCKNNINHPRAKPLKDFRTLQTHYKRKHGA
Sbjct: 208 HGSEYRKGPESLRGAQPAAMLRLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGA 267

Query: 560 KPFSCRKCGKLFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGNGHTPHPCH 739
           KPF CRKCGK FAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFG GH+PHP H
Sbjct: 268 KPFMCRKCGKTFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHSPHPSH 327

Query: 740 QSFEEEKECITGSEDE 787
           + F++EKECITGSEDE
Sbjct: 328 EGFDDEKECITGSEDE 343


>ref|XP_002305556.1| predicted protein [Populus trichocarpa] gi|222848520|gb|EEE86067.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  394 bits (1013), Expect = e-107
 Identities = 182/261 (69%), Positives = 210/261 (80%), Gaps = 1/261 (0%)
 Frame = +2

Query: 8   ALDKKTKCLPLLNRXXXXXXXXXXXXXXXXXXSGIRDEKLEKVTVTLHIGLPNNEGFDGV 187
           A+ +  +CLPLL+R                   G+++EK  +VTV LHIGLPN+   +  
Sbjct: 73  AMKETIQCLPLLSRFTEKKTLKDGDMEVKESTVGVKEEK--EVTVALHIGLPNSGDSEVE 130

Query: 188 TKPLNYNDDEKTIKKSFEGCSLNTEGRFWIPTPAQILHGPTQFSCSVCSKTFNRYNNMQM 367
           T+ L+  + E ++KK+F+G S N+E RFWIPTPAQIL GP QF+CS+CSKTFNRYNNMQM
Sbjct: 131 TEVLDLKE-EISMKKNFQGYSFNSESRFWIPTPAQILVGPMQFACSICSKTFNRYNNMQM 189

Query: 368 HMWGHGSQYRRGPESLKGTQPTTMLKLPCYCCAHGCKNNINHPRAKPLKDFRTLQTHYKR 547
           HMWGHGS++R+GP+SLKGTQP  ML+LPCYCCA GCKNNINHPRAKPLKDFRTLQTHYKR
Sbjct: 190 HMWGHGSEFRKGPDSLKGTQPAAMLRLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKR 249

Query: 548 KHGAKPFSCRKCGKLFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGNGHTP 727
           KHGAKPF CRKC K FAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFG GH+P
Sbjct: 250 KHGAKPFMCRKCSKTFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHSP 309

Query: 728 HPCHQSFEE-EKECITGSEDE 787
           HP  + FEE +KECITGSEDE
Sbjct: 310 HPSLEGFEEIDKECITGSEDE 330


>ref|NP_001241401.1| uncharacterized protein LOC100802773 [Glycine max]
           gi|255639739|gb|ACU20163.1| unknown [Glycine max]
          Length = 323

 Score =  389 bits (999), Expect = e-106
 Identities = 174/231 (75%), Positives = 203/231 (87%), Gaps = 5/231 (2%)
 Frame = +2

Query: 110 IRDEKLEKVTVTLHIGLPN-NEGF-DGVTKPLNYN--DDEKTIKKSFEGCSLNT-EGRFW 274
           +++EK+E+VTV LHIGLP+ N+G  D V + + ++  ++E++ K+SF GCS N  E RFW
Sbjct: 86  VKEEKVEQVTVALHIGLPDSNKGHADEVDEKMIFHVKEEEESSKRSFHGCSFNNQERRFW 145

Query: 275 IPTPAQILHGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRRGPESLKGTQPTTMLKLPC 454
           IPTPAQIL GP QF+CS+CSKTFNRYNNMQMHMWGHGS++R+GP+SLKGTQP  ML+LPC
Sbjct: 146 IPTPAQILVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLKGTQPAAMLRLPC 205

Query: 455 YCCAHGCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFSCRKCGKLFAVKGDWRTHEKNC 634
           YCCA GCKNNINHPRAKPLKDFRTLQTHYKRKHG KPF CRKCGK FAVKGDWRTHEKNC
Sbjct: 206 YCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKCGKTFAVKGDWRTHEKNC 265

Query: 635 GKLWYCTCGSDFKHKRSLKDHIRSFGNGHTPHPCHQSFEEEKECITGSEDE 787
           GKLWYCTCGSDFKHKRSLKDHIRSFG GH PHP  ++FE+EKECITGS+++
Sbjct: 266 GKLWYCTCGSDFKHKRSLKDHIRSFGKGHNPHPPFEAFEDEKECITGSDED 316


>ref|XP_003541972.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Glycine max]
          Length = 319

 Score =  387 bits (993), Expect = e-105
 Identities = 174/233 (74%), Positives = 197/233 (84%), Gaps = 9/233 (3%)
 Frame = +2

Query: 116 DEKLEKVTVTLHIGLPNNEGFD-------GVTKPLNYNDDEKTIKKSFEG-CSLNTEGRF 271
           ++K+E+VTV LHIGLPN  G +          K  +  ++E+ +KKSF+G CS N E RF
Sbjct: 81  EKKVEQVTVALHIGLPNTRGHEPDDDHDADEKKLFHVKEEEEPLKKSFQGNCSFNQERRF 140

Query: 272 WIPTPAQILHGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRRGPESLKGTQPTTMLKLP 451
           WIPTPAQIL GP QF+CS+CSK+FNRYNNMQMHMWGHGS++R+GPESLKGTQP  ML+LP
Sbjct: 141 WIPTPAQILVGPMQFACSICSKSFNRYNNMQMHMWGHGSEFRKGPESLKGTQPAAMLRLP 200

Query: 452 CYCCAHGCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFSCRKCGKLFAVKGDWRTHEKN 631
           CYCCA GCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPF CRKC K FAVKGDWRTHEKN
Sbjct: 201 CYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKCSKSFAVKGDWRTHEKN 260

Query: 632 CGKLWYCTCGSDFKHKRSLKDHIRSFGNGHTPHPCHQSF-EEEKECITGSEDE 787
           CGKLWYCTCGSDFKHKRSLKDHIRSFG GH+PHP  + F E+EKEC+TGS+DE
Sbjct: 261 CGKLWYCTCGSDFKHKRSLKDHIRSFGKGHSPHPSLEGFVEDEKECVTGSDDE 313


>ref|XP_003539466.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Glycine max]
          Length = 321

 Score =  385 bits (990), Expect = e-105
 Identities = 174/236 (73%), Positives = 196/236 (83%), Gaps = 12/236 (5%)
 Frame = +2

Query: 116 DEKLEKVTVTLHIGLPNNEGFD----------GVTKPLNYNDDEKTIKKSFEG-CSLNTE 262
           ++K+E+VTV LHIGLPN  G D             K  +  ++E+ +KK F+G CS N E
Sbjct: 80  EKKVEQVTVALHIGLPNTGGHDPDDDNDHDADDEKKVFHVKEEEEPLKKGFQGNCSFNQE 139

Query: 263 GRFWIPTPAQILHGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRRGPESLKGTQPTTML 442
            RFWIPTPAQIL GP QF+CS+CSKTFNRYNNMQMHMWGHGS++R+GP+SLKGTQP  ML
Sbjct: 140 RRFWIPTPAQILVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLKGTQPAAML 199

Query: 443 KLPCYCCAHGCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFSCRKCGKLFAVKGDWRTH 622
           +LPCYCCA GCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPF CRKC K FAVKGDWRTH
Sbjct: 200 RLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKCSKSFAVKGDWRTH 259

Query: 623 EKNCGKLWYCTCGSDFKHKRSLKDHIRSFGNGHTPHPCHQSF-EEEKECITGSEDE 787
           EKNCGKLWYCTCGSDFKHKRSLKDHIRSFG GH+PHP  + F E+EKEC+TGS+DE
Sbjct: 260 EKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHSPHPSLEGFVEDEKECVTGSDDE 315


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