BLASTX nr result

ID: Coptis23_contig00019731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019731
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528748.1| conserved hypothetical protein [Ricinus comm...   154   1e-35
ref|XP_002315057.1| predicted protein [Populus trichocarpa] gi|2...   151   7e-35
ref|NP_566649.1| uncharacterized protein [Arabidopsis thaliana] ...   149   2e-34
ref|XP_002885329.1| hypothetical protein ARALYDRAFT_479498 [Arab...   149   3e-34
ref|XP_003524967.1| PREDICTED: uncharacterized protein LOC100792...   148   4e-34

>ref|XP_002528748.1| conserved hypothetical protein [Ricinus communis]
           gi|223531842|gb|EEF33660.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 313

 Score =  154 bits (388), Expect = 1e-35
 Identities = 75/101 (74%), Positives = 88/101 (87%), Gaps = 2/101 (1%)
 Frame = -2

Query: 312 DFEEETNDN--SPWEGAIVYKRNATVTHLEYCTTLERLGLGKLSTEVSKSRASTMGLRVT 139
           D EEE  ++  SPWEGAI+YKRN +V+H+EYCTTLERLGLGK+STEVSKSRAS MGLRVT
Sbjct: 75  DLEEENPEDMESPWEGAIIYKRNPSVSHIEYCTTLERLGLGKVSTEVSKSRASVMGLRVT 134

Query: 138 KGVKEFKMGTPVLVSVDVCRKKGKLRLDGIVKTVLSLGCNR 16
           K VK+F +GTPV +S+DV RKK KLRLDGI+KTVL+L CNR
Sbjct: 135 KAVKDFPLGTPVQISIDVTRKKQKLRLDGIIKTVLTLTCNR 175


>ref|XP_002315057.1| predicted protein [Populus trichocarpa] gi|222864097|gb|EEF01228.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  151 bits (381), Expect = 7e-35
 Identities = 70/107 (65%), Positives = 92/107 (85%), Gaps = 3/107 (2%)
 Frame = -2

Query: 327 IAFNYDFEEETNDN---SPWEGAIVYKRNATVTHLEYCTTLERLGLGKLSTEVSKSRAST 157
           ++ N+D +EE +     SPWEGAI+YKRN++++H+EYCTTLERLGLGKLSTE+SKSRAS 
Sbjct: 81  VSLNWDDQEEEDAEDMESPWEGAIIYKRNSSISHVEYCTTLERLGLGKLSTEISKSRASV 140

Query: 156 MGLRVTKGVKEFKMGTPVLVSVDVCRKKGKLRLDGIVKTVLSLGCNR 16
           MGLRVTK VK++ +GTPV +S+DV +KK +LRLDGI+KTV++LGC R
Sbjct: 141 MGLRVTKAVKDYPLGTPVQISIDVTKKKKRLRLDGIIKTVITLGCYR 187


>ref|NP_566649.1| uncharacterized protein [Arabidopsis thaliana]
           gi|11994192|dbj|BAB01295.1| unnamed protein product
           [Arabidopsis thaliana] gi|21593774|gb|AAM65741.1|
           unknown [Arabidopsis thaliana]
           gi|109946589|gb|ABG48473.1| At3g19810 [Arabidopsis
           thaliana] gi|110742135|dbj|BAE98996.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332642771|gb|AEE76292.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 321

 Score =  149 bits (377), Expect = 2e-34
 Identities = 72/99 (72%), Positives = 86/99 (86%)
 Frame = -2

Query: 312 DFEEETNDNSPWEGAIVYKRNATVTHLEYCTTLERLGLGKLSTEVSKSRASTMGLRVTKG 133
           D EE  +  SPWEG+++Y+RNA+VTH+EYCTTLERLGLG+LST+VSK RAS MGLRVTK 
Sbjct: 87  DQEEIEDTGSPWEGSVMYRRNASVTHVEYCTTLERLGLGRLSTDVSKKRASAMGLRVTKD 146

Query: 132 VKEFKMGTPVLVSVDVCRKKGKLRLDGIVKTVLSLGCNR 16
           VK++  GTPV VSVDV RKK KLRLDGIV+TV++LGCNR
Sbjct: 147 VKDYPDGTPVQVSVDVIRKKKKLRLDGIVRTVITLGCNR 185


>ref|XP_002885329.1| hypothetical protein ARALYDRAFT_479498 [Arabidopsis lyrata subsp.
           lyrata] gi|297331169|gb|EFH61588.1| hypothetical protein
           ARALYDRAFT_479498 [Arabidopsis lyrata subsp. lyrata]
          Length = 317

 Score =  149 bits (376), Expect = 3e-34
 Identities = 72/99 (72%), Positives = 85/99 (85%)
 Frame = -2

Query: 312 DFEEETNDNSPWEGAIVYKRNATVTHLEYCTTLERLGLGKLSTEVSKSRASTMGLRVTKG 133
           D EE  +  SPWEG+++Y+RNA+ TH+EYCTTLERLGLG+LSTEVSK RAS MGLRVTK 
Sbjct: 84  DQEEIEDTGSPWEGSVMYRRNASATHVEYCTTLERLGLGRLSTEVSKKRASAMGLRVTKD 143

Query: 132 VKEFKMGTPVLVSVDVCRKKGKLRLDGIVKTVLSLGCNR 16
           VK++  GTPV VSVDV RKK KLRLDGIV+TV++LGCNR
Sbjct: 144 VKDYPDGTPVQVSVDVIRKKKKLRLDGIVRTVITLGCNR 182


>ref|XP_003524967.1| PREDICTED: uncharacterized protein LOC100792185 [Glycine max]
          Length = 318

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/104 (68%), Positives = 87/104 (83%), Gaps = 1/104 (0%)
 Frame = -2

Query: 324 AFNYDFEEETND-NSPWEGAIVYKRNATVTHLEYCTTLERLGLGKLSTEVSKSRASTMGL 148
           +  +D +EE  D  SPWEGA++YKRNAT+ HLEYCTTLERLGL KLS++VSK+RA+ MGL
Sbjct: 81  SLGWDDDEEVEDMGSPWEGAVIYKRNATILHLEYCTTLERLGLAKLSSDVSKTRAAAMGL 140

Query: 147 RVTKGVKEFKMGTPVLVSVDVCRKKGKLRLDGIVKTVLSLGCNR 16
           RVTK VK+F  GTPV +S+DV RKK KLRLDGI+KTV++L CNR
Sbjct: 141 RVTKAVKDFPNGTPVQISIDVTRKKKKLRLDGIIKTVITLLCNR 184


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