BLASTX nr result

ID: Coptis23_contig00019726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019726
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD02556.1| PGPD14 [Petunia x hybrida]                             140   8e-32
ref|XP_002268193.1| PREDICTED: RING finger and CHY zinc finger d...   140   1e-31
ref|XP_002523718.1| zinc finger protein, putative [Ricinus commu...   137   7e-31
ref|XP_002519457.1| zinc finger protein, putative [Ricinus commu...   136   2e-30
ref|XP_002314304.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30

>gb|AAD02556.1| PGPD14 [Petunia x hybrida]
          Length = 285

 Score =  140 bits (354), Expect = 8e-32
 Identities = 62/77 (80%), Positives = 68/77 (88%)
 Frame = +3

Query: 3   CSRSVCDMSKVWEKLDQEITSTPMPEMYQNKMVWILCNDCGTTSEVHFHIVAHKCLSCNS 182
           CSRS CDMS+VWEKLDQE+ STPMPEMYQNKMVWILCNDCG TSEV+FHIVA KC +C S
Sbjct: 204 CSRSYCDMSRVWEKLDQEVASTPMPEMYQNKMVWILCNDCGETSEVNFHIVARKCPNCKS 263

Query: 183 YNTRQTRGSVASCSSTL 233
           YNTRQTRG  +SCSS +
Sbjct: 264 YNTRQTRGGPSSCSSRI 280


>ref|XP_002268193.1| PREDICTED: RING finger and CHY zinc finger domain-containing
           protein 1 isoform 2 [Vitis vinifera]
           gi|225441159|ref|XP_002268149.1| PREDICTED: RING finger
           and CHY zinc finger domain-containing protein 1 isoform
           1 [Vitis vinifera] gi|297739980|emb|CBI30162.3| unnamed
           protein product [Vitis vinifera]
          Length = 289

 Score =  140 bits (353), Expect = 1e-31
 Identities = 61/77 (79%), Positives = 67/77 (87%)
 Frame = +3

Query: 3   CSRSVCDMSKVWEKLDQEITSTPMPEMYQNKMVWILCNDCGTTSEVHFHIVAHKCLSCNS 182
           CS+S CDMS VWEKLDQE+  TPMP M++NKMVWILCNDCG TSEV+FHIVAHKCL CNS
Sbjct: 208 CSKSYCDMSHVWEKLDQEVALTPMPSMFENKMVWILCNDCGETSEVNFHIVAHKCLKCNS 267

Query: 183 YNTRQTRGSVASCSSTL 233
           YNTRQTRG  ASCSS +
Sbjct: 268 YNTRQTRGGPASCSSRI 284


>ref|XP_002523718.1| zinc finger protein, putative [Ricinus communis]
           gi|223537022|gb|EEF38658.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 275

 Score =  137 bits (346), Expect = 7e-31
 Identities = 61/78 (78%), Positives = 68/78 (87%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   CSRSVCDMSKVWEKLDQEITSTPMPEMYQNKMVWILCNDCGTTSEVHFHIVAHKCLSCNS 182
           CS+S+CDMSK+W KLDQEI +TPMPE+YQNKMVWILCNDCG  S V FHIVAHKCL+C S
Sbjct: 193 CSKSICDMSKLWRKLDQEIAATPMPEIYQNKMVWILCNDCGANSHVQFHIVAHKCLNCKS 252

Query: 183 YNTRQTRG-SVASCSSTL 233
           YNTRQTRG S ASCSS +
Sbjct: 253 YNTRQTRGDSTASCSSEM 270


>ref|XP_002519457.1| zinc finger protein, putative [Ricinus communis]
           gi|223541320|gb|EEF42871.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 282

 Score =  136 bits (343), Expect = 2e-30
 Identities = 60/77 (77%), Positives = 66/77 (85%)
 Frame = +3

Query: 3   CSRSVCDMSKVWEKLDQEITSTPMPEMYQNKMVWILCNDCGTTSEVHFHIVAHKCLSCNS 182
           CSRS CDMS VWEKLD+E+ STPMP++YQNKMVWILCNDCG TSEV FHIVA KC+ CNS
Sbjct: 203 CSRSYCDMSCVWEKLDREVASTPMPQIYQNKMVWILCNDCGETSEVIFHIVARKCIKCNS 262

Query: 183 YNTRQTRGSVASCSSTL 233
           YNTRQTRG   SCSS +
Sbjct: 263 YNTRQTRGGPTSCSSRI 279


>ref|XP_002314304.1| predicted protein [Populus trichocarpa] gi|222850712|gb|EEE88259.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score =  134 bits (338), Expect = 6e-30
 Identities = 59/76 (77%), Positives = 66/76 (86%), Gaps = 1/76 (1%)
 Frame = +3

Query: 3   CSRSVCDMSKVWEKLDQEITSTPMPEMYQNKMVWILCNDCGTTSEVHFHIVAHKCLSCNS 182
           CS+S+CDM+++W+KLDQEI +TPMPE YQNKMVWILCNDCG  S V FHIVAHKCL CNS
Sbjct: 209 CSKSICDMTRLWKKLDQEIAATPMPETYQNKMVWILCNDCGANSHVQFHIVAHKCLRCNS 268

Query: 183 YNTRQTRGS-VASCSS 227
           YNTRQTRG   ASCSS
Sbjct: 269 YNTRQTRGGPAASCSS 284


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