BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019723
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   114   2e-23
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...   112   6e-23
ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatul...   110   2e-22
ref|NP_001030886.1| F-box/LRR-repeat protein [Arabidopsis thalia...   105   9e-21
ref|NP_001190131.1| F-box/LRR-repeat protein [Arabidopsis thalia...   105   9e-21

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  114 bits (285), Expect = 2e-23
 Identities = 79/200 (39%), Positives = 111/200 (55%), Gaps = 6/200 (3%)
 Frame = +2

Query: 41  EGKDRFSNLPSTLLQYILSFIPTKEVVATSILSTRWKYLWTSHPNLIFDE--GIADEDTV 214
           E +D  SNLP  LL +ILSF+PTK  V TSILS RW+YLW S P L FD+   +     V
Sbjct: 7   ESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLV 66

Query: 215 EKKK----FVDFIDRVLTLHDESNIKTLSITCKDPAQSRIDAWISAAVQHKVQELNLDVN 382
           E ++    F +F+D VL   + S IK   +  +D     + +WI  A++ +VQEL+L + 
Sbjct: 67  ELEERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDNNLDSVYSWICIALERRVQELDLHLL 126

Query: 383 VKECLSFVLLPELVCRSDSLSILELQSNLGIVIATPFSLPNLKILHLHSVLYSSTLPKKA 562
           +      V LP +     +L +++L   L + I T   LP+LK LHL SV YS      +
Sbjct: 127 ID---WRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSD---DDS 180

Query: 563 KEPLLLNCPVLSELILENCE 622
            + LL  CPVL EL++E  E
Sbjct: 181 IQKLLSGCPVLEELVIEREE 200


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score =  112 bits (281), Expect = 6e-23
 Identities = 76/206 (36%), Positives = 114/206 (55%), Gaps = 3/206 (1%)
 Frame = +2

Query: 11  KELSEEQSVSEGKDRFSNLPSTLLQYILSFIPTKEVVATSILSTRWKYLWTSHPNLIFDE 190
           K+L  E+    G+    NLP  LL++ILSF+ T+  V TSILS +W +LW S  NL F  
Sbjct: 13  KKLKAEKETDSGEKSIGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTF-- 70

Query: 191 GIADEDTVEKKKFVDFIDRVLTLHDESNIKTLSITCK---DPAQSRIDAWISAAVQHKVQ 361
                 + ++K F+DF+DRVL L   SNI    ++C+   DP  SR+  WISAAV   V+
Sbjct: 71  --FGLKSPKRKLFMDFVDRVLALRGPSNIVQFYLSCEVKDDP--SRVGTWISAAVNRNVK 126

Query: 362 ELNLDVNVKECLSFVLLPELVCRSDSLSILELQSNLGIVIATPFSLPNLKILHLHSVLYS 541
           +L L++   E  SFV LP  +   ++L+ LE+     + + +  SL  LKIL+L+ V+++
Sbjct: 127 DLYLELRDFEA-SFV-LPHCLFNCETLTELEINMPYILKLPSSISLSCLKILNLYEVIFT 184

Query: 542 STLPKKAKEPLLLNCPVLSELILENC 619
                +     L + P L EL +  C
Sbjct: 185 DDHSTQQ----LFSLPNLVELEIHEC 206


>ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485673|gb|AES66876.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 411

 Score =  110 bits (276), Expect = 2e-22
 Identities = 71/204 (34%), Positives = 115/204 (56%), Gaps = 2/204 (0%)
 Frame = +2

Query: 14  ELSEEQSVSEGKDRFSNLPSTLLQYILSFIPTKEVVATSILSTRWKYLWTSHPNLIFDE- 190
           +LS+ Q  ++G+D  SNLP  ++  +LSF+PTK+ V+TS+LS RW YLWT    L FD+ 
Sbjct: 15  KLSKRQKSNKGQDLISNLPDHIIGCVLSFLPTKDAVSTSVLSKRWIYLWTFITKLDFDDI 74

Query: 191 GIADEDTVEKKKFVDFIDRVLTLHDESNIKTLSITCKDPAQSR-IDAWISAAVQHKVQEL 367
           G    + + K  FVDF+DRVL   +  +I++ S+   +   S  I+ WIS  +  +V++L
Sbjct: 75  GYCSSNEIRKACFVDFVDRVLLRLNSEHIRSFSLKMSEKYDSSYINKWISIVINLRVRKL 134

Query: 368 NLDVNVKECLSFVLLPELVCRSDSLSILELQSNLGIVIATPFSLPNLKILHLHSVLYSST 547
              V ++  L+    P L C+S    +L   S   I ++T   L +L +L+L+ ++ S +
Sbjct: 135 R--VYLQNDLAVSSDPLLKCQSLEELVL---SRCAITLSTFVCLSSLAVLNLYCIIISCS 189

Query: 548 LPKKAKEPLLLNCPVLSELILENC 619
               +K  L LN PVL + +   C
Sbjct: 190 SSNDSK-TLTLNFPVLRKFVTFGC 212


>ref|NP_001030886.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|332646326|gb|AEE79847.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 314

 Score =  105 bits (262), Expect = 9e-21
 Identities = 79/203 (38%), Positives = 108/203 (53%), Gaps = 9/203 (4%)
 Frame = +2

Query: 50  DRFSNLPSTLLQYILSFIPTKEVVATSILSTRWKYLWTSHPNLIFDEGI---ADEDTVEK 220
           D FS+LP+ LL +ILSF+ TKE   TS+LS RW+ L+   P L FD+ +    +E   EK
Sbjct: 2   DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREK 61

Query: 221 ----KKFVDFIDRVLTLHDESNIKTLSITCKDPAQS-RIDAWISAAVQHKVQELNLDVNV 385
               + F+DF+DRVL LH +S IKT S+ CK    S  +D WI   +   V +L+L ++ 
Sbjct: 62  EGILQSFMDFVDRVLDLHGDSLIKTFSLKCKTGVDSDHVDRWICNVLARGVSDLDLFIDF 121

Query: 386 KECLSFVLLPELVCRSDSLSILELQSNLGIVIATPF-SLPNLKILHLHSVLYSSTLPKKA 562
           ++  S   LP  V  S +L +L + S   +     F  LP LK L    VL S  L    
Sbjct: 122 RDLYS---LPHEVGVSRTLVVLRVGSESDLYWWQKFLCLPMLKTL----VLDSCWLCIGQ 174

Query: 563 KEPLLLNCPVLSELILENCEMPD 631
            + LLL CP L EL + N    D
Sbjct: 175 FQILLLACPALEELDMTNTRWKD 197


>ref|NP_001190131.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|332646327|gb|AEE79848.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 465

 Score =  105 bits (262), Expect = 9e-21
 Identities = 79/203 (38%), Positives = 108/203 (53%), Gaps = 9/203 (4%)
 Frame = +2

Query: 50  DRFSNLPSTLLQYILSFIPTKEVVATSILSTRWKYLWTSHPNLIFDEGI---ADEDTVEK 220
           D FS+LP+ LL +ILSF+ TKE   TS+LS RW+ L+   P L FD+ +    +E   EK
Sbjct: 2   DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREK 61

Query: 221 ----KKFVDFIDRVLTLHDESNIKTLSITCKDPAQS-RIDAWISAAVQHKVQELNLDVNV 385
               + F+DF+DRVL LH +S IKT S+ CK    S  +D WI   +   V +L+L ++ 
Sbjct: 62  EGILQSFMDFVDRVLDLHGDSLIKTFSLKCKTGVDSDHVDRWICNVLARGVSDLDLFIDF 121

Query: 386 KECLSFVLLPELVCRSDSLSILELQSNLGIVIATPF-SLPNLKILHLHSVLYSSTLPKKA 562
           ++  S   LP  V  S +L +L + S   +     F  LP LK L    VL S  L    
Sbjct: 122 RDLYS---LPHEVGVSRTLVVLRVGSESDLYWWQKFLCLPMLKTL----VLDSCWLCIGQ 174

Query: 563 KEPLLLNCPVLSELILENCEMPD 631
            + LLL CP L EL + N    D
Sbjct: 175 FQILLLACPALEELDMTNTRWKD 197