BLASTX nr result

ID: Coptis23_contig00019718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019718
         (893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510979.1| DNA binding protein, putative [Ricinus commu...   240   3e-61
ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256...   228   2e-57
emb|CBI27823.3| unnamed protein product [Vitis vinifera]              221   1e-55
emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera]   218   1e-54
ref|XP_002263694.1| PREDICTED: uncharacterized protein LOC100260...   218   2e-54

>ref|XP_002510979.1| DNA binding protein, putative [Ricinus communis]
           gi|223550094|gb|EEF51581.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 328

 Score =  240 bits (613), Expect = 3e-61
 Identities = 117/184 (63%), Positives = 145/184 (78%), Gaps = 1/184 (0%)
 Frame = +3

Query: 45  KKKKDYAEPWDY-YSYYPATLPIRRPHSGDPELLDDEEFGEASADLEYDESSISPAAELG 221
           K KKDY EPWDY  +YYP TLP+RRP+SGDP LLD+ EFGEA+  LEYDES+++PA++L 
Sbjct: 138 KIKKDYREPWDYDRTYYPTTLPLRRPYSGDPVLLDEAEFGEAARKLEYDESTMNPASDLE 197

Query: 222 LTEECGQERMLFLQLPATLPLVRRSLSVNGKEVIDSSKPFRRGAQPQKDSGLGDMPAGFM 401
           L EEC  E+M+F QLPA LPLV+RS S  GKE  + S P +     +K+S L  + AG+M
Sbjct: 198 LLEECDTEKMIFFQLPAKLPLVKRSASAKGKEKAEGSIPSQGKNAAKKESSLDGLSAGYM 257

Query: 402 GKMLVYKSGAVKLKLGEIVYDVSPGSDCVFAQNVAAINLKEKHCCDLGELDKRAVITPNV 581
           GKMLVY+SGAVKLKLG+ +YDVS GSDC+FAQ+V AIN   KHCC +GEL+KRAV+TP+V
Sbjct: 258 GKMLVYRSGAVKLKLGDTLYDVSQGSDCMFAQDVMAINTAAKHCCTIGELEKRAVVTPDV 317

Query: 582 DSLL 593
           DSLL
Sbjct: 318 DSLL 321


>ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256088 [Vitis vinifera]
          Length = 289

 Score =  228 bits (580), Expect = 2e-57
 Identities = 113/201 (56%), Positives = 142/201 (70%)
 Frame = +3

Query: 3   EGPVSDDGRYLIHEKKKKDYAEPWDYYSYYPATLPIRRPHSGDPELLDDEEFGEASADLE 182
           + P S  G Y       K+Y EPWDYY+YYP TLP+RRP+SG+PELLD+EEFGEAS    
Sbjct: 100 QDPASGGGLYGSGLSDHKEYKEPWDYYTYYPVTLPLRRPYSGNPELLDEEEFGEASESTA 159

Query: 183 YDESSISPAAELGLTEECGQERMLFLQLPATLPLVRRSLSVNGKEVIDSSKPFRRGAQPQ 362
           YDE+S +PA ELGL +E  +  MLFLQLPAT+P+++++ +   KE               
Sbjct: 160 YDENSTNPAMELGLMDENQEASMLFLQLPATMPMIKQAATAEVKE--------------N 205

Query: 363 KDSGLGDMPAGFMGKMLVYKSGAVKLKLGEIVYDVSPGSDCVFAQNVAAINLKEKHCCDL 542
           K   L ++P+GFMGKMLVYKSGA+KLKLG+ +YDVSPG DCVFAQ+V AIN ++K CC L
Sbjct: 206 KTCRLEELPSGFMGKMLVYKSGAIKLKLGDTLYDVSPGLDCVFAQDVVAINTEDKCCCVL 265

Query: 543 GELDKRAVITPNVDSLLKGCD 605
           GEL KRAV+TP+VDS L   D
Sbjct: 266 GELKKRAVVTPDVDSALSSMD 286


>emb|CBI27823.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  221 bits (564), Expect = 1e-55
 Identities = 111/201 (55%), Positives = 139/201 (69%)
 Frame = +3

Query: 3   EGPVSDDGRYLIHEKKKKDYAEPWDYYSYYPATLPIRRPHSGDPELLDDEEFGEASADLE 182
           + P S  G Y       K+Y EPWDYY+YYP TLP+RRP+SG+PELLD+EEFGEAS    
Sbjct: 110 QDPASGGGLYGSGLSDHKEYKEPWDYYTYYPVTLPLRRPYSGNPELLDEEEFGEASESTA 169

Query: 183 YDESSISPAAELGLTEECGQERMLFLQLPATLPLVRRSLSVNGKEVIDSSKPFRRGAQPQ 362
           YDE+S +PA ELGL +E  +  MLFLQLPAT+P++++                   A   
Sbjct: 170 YDENSTNPAMELGLMDENQEASMLFLQLPATMPMIKQ-------------------AATA 210

Query: 363 KDSGLGDMPAGFMGKMLVYKSGAVKLKLGEIVYDVSPGSDCVFAQNVAAINLKEKHCCDL 542
           +   L ++P+GFMGKMLVYKSGA+KLKLG+ +YDVSPG DCVFAQ+V AIN ++K CC L
Sbjct: 211 ETCRLEELPSGFMGKMLVYKSGAIKLKLGDTLYDVSPGLDCVFAQDVVAINTEDKCCCVL 270

Query: 543 GELDKRAVITPNVDSLLKGCD 605
           GEL KRAV+TP+VDS L   D
Sbjct: 271 GELKKRAVVTPDVDSALSSMD 291


>emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera]
          Length = 348

 Score =  218 bits (556), Expect = 1e-54
 Identities = 113/201 (56%), Positives = 138/201 (68%), Gaps = 20/201 (9%)
 Frame = +3

Query: 51  KKDYAEPWDY-YSYYPATLPIRRPHSGDPELLDDEEFGEASADLEYDESSISPAAELGLT 227
           +K Y EPWDY +SYYP TLP+R+PHSGDPE+LD+ EFGEAS +LEYDE +I+PA+ELGL 
Sbjct: 141 RKRYKEPWDYVHSYYPTTLPLRKPHSGDPEILDEAEFGEASTNLEYDEKTINPASELGLL 200

Query: 228 EECGQERMLFLQLPATLPLVRRSLSVNGKEVIDSS------------KPFRRGAQPQKDS 371
           EE  + RM   QLPA LPLV++S S  GKE++ +S            K   R +   K  
Sbjct: 201 EESEKGRMFLFQLPANLPLVKQSASAKGKEIVGNSTSLEGIYASAKGKQVARSSLSSKSI 260

Query: 372 G-------LGDMPAGFMGKMLVYKSGAVKLKLGEIVYDVSPGSDCVFAQNVAAINLKEKH 530
           G       L D+  G  GKMLVYKSGA+KLKLGEI+YDVSPG DC   Q+V AIN  +KH
Sbjct: 261 GTSEHSCRLEDLAGGHXGKMLVYKSGAIKLKLGEILYDVSPGLDCTCVQDVVAINTVDKH 320

Query: 531 CCDLGELDKRAVITPNVDSLL 593
           C  LGEL KR ++TP+VDSLL
Sbjct: 321 CYALGELGKRVIVTPDVDSLL 341


>ref|XP_002263694.1| PREDICTED: uncharacterized protein LOC100260717 [Vitis vinifera]
           gi|297745083|emb|CBI38675.3| unnamed protein product
           [Vitis vinifera]
          Length = 348

 Score =  218 bits (554), Expect = 2e-54
 Identities = 112/201 (55%), Positives = 139/201 (69%), Gaps = 20/201 (9%)
 Frame = +3

Query: 51  KKDYAEPWDY-YSYYPATLPIRRPHSGDPELLDDEEFGEASADLEYDESSISPAAELGLT 227
           +K Y EPWDY +SYYP TLP+R+PHSGDPE+LD+ EFGEAS +LEYDE +I+PA+ELGL 
Sbjct: 141 RKRYKEPWDYVHSYYPTTLPLRKPHSGDPEILDEAEFGEASTNLEYDEKTINPASELGLL 200

Query: 228 EECGQERMLFLQLPATLPLVRRSLSVNGKEVIDSS------------KPFRRGAQPQKDS 371
           EE  + RM   QLPA LPL ++S S  GKE++++S            K   R +   K  
Sbjct: 201 EESEKGRMFLFQLPANLPLFKQSPSAKGKEIVENSTSLEGIYASAKGKQVARSSLSSKSI 260

Query: 372 G-------LGDMPAGFMGKMLVYKSGAVKLKLGEIVYDVSPGSDCVFAQNVAAINLKEKH 530
           G       L D+  G +GKMLVYKSGA+KLKLGEI+YDVSPG DC   Q+V AIN  +KH
Sbjct: 261 GTSEHSCRLEDLAGGHIGKMLVYKSGAIKLKLGEILYDVSPGLDCTCVQDVVAINTVDKH 320

Query: 531 CCDLGELDKRAVITPNVDSLL 593
           C  LGEL KR ++TP+VDSLL
Sbjct: 321 CYALGELGKRVIVTPDVDSLL 341


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