BLASTX nr result

ID: Coptis23_contig00019711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019711
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525301.1| amino acid binding protein, putative [Ricinu...   135   4e-30
ref|XP_002265013.2| PREDICTED: uncharacterized protein LOC100264...   134   8e-30
ref|XP_002310330.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_002320665.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
gb|ADE76039.1| unknown [Picea sitchensis]                             118   4e-25

>ref|XP_002525301.1| amino acid binding protein, putative [Ricinus communis]
           gi|223535459|gb|EEF37129.1| amino acid binding protein,
           putative [Ricinus communis]
          Length = 477

 Score =  135 bits (339), Expect = 4e-30
 Identities = 61/77 (79%), Positives = 70/77 (90%)
 Frame = -3

Query: 252 MNSGYKPYLNAEFEALIERIHPPSVSIDNETCKDCTLVKVDSANRHGILLEMVQVLTDLD 73
           M   Y+PY++ EFE+LIERI+PP V IDNE C+DCT+VKVDSAN+HGILLEMVQVLTDLD
Sbjct: 1   MEIAYQPYIDPEFESLIERIYPPRVCIDNEACQDCTVVKVDSANKHGILLEMVQVLTDLD 60

Query: 72  LIISKSYICSDGGWFMD 22
           L+ISKSYICSDGGWFMD
Sbjct: 61  LVISKSYICSDGGWFMD 77


>ref|XP_002265013.2| PREDICTED: uncharacterized protein LOC100264704 [Vitis vinifera]
           gi|296085715|emb|CBI29515.3| unnamed protein product
           [Vitis vinifera]
          Length = 468

 Score =  134 bits (337), Expect = 8e-30
 Identities = 60/77 (77%), Positives = 70/77 (90%)
 Frame = -3

Query: 252 MNSGYKPYLNAEFEALIERIHPPSVSIDNETCKDCTLVKVDSANRHGILLEMVQVLTDLD 73
           M + YKPY + ++E+LIERIHPP V IDN+ C+DCTLVKVDSAN+HGILLEMVQVLTDL+
Sbjct: 1   MENFYKPYFDPDYESLIERIHPPRVCIDNDACQDCTLVKVDSANKHGILLEMVQVLTDLE 60

Query: 72  LIISKSYICSDGGWFMD 22
           L+ISKSYICSDGGWFMD
Sbjct: 61  LVISKSYICSDGGWFMD 77


>ref|XP_002310330.1| predicted protein [Populus trichocarpa] gi|222853233|gb|EEE90780.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/77 (76%), Positives = 68/77 (88%)
 Frame = -3

Query: 252 MNSGYKPYLNAEFEALIERIHPPSVSIDNETCKDCTLVKVDSANRHGILLEMVQVLTDLD 73
           M + Y+PY++ EFE+LIERI+PP V IDNE  +DCTLVK DSAN+HGILLEMVQVLTDLD
Sbjct: 1   METTYQPYIDPEFESLIERIYPPRVCIDNEAYQDCTLVKADSANKHGILLEMVQVLTDLD 60

Query: 72  LIISKSYICSDGGWFMD 22
           L+ISKSYI SDGGWFMD
Sbjct: 61  LVISKSYISSDGGWFMD 77


>ref|XP_002320665.1| predicted protein [Populus trichocarpa] gi|222861438|gb|EEE98980.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score =  126 bits (316), Expect = 2e-27
 Identities = 57/75 (76%), Positives = 69/75 (92%)
 Frame = -3

Query: 246 SGYKPYLNAEFEALIERIHPPSVSIDNETCKDCTLVKVDSANRHGILLEMVQVLTDLDLI 67
           + YKPY++AEFE+L+ERI+PP V +DNET +DCTL+KVDSAN+ GILLEMVQVLTDLDL+
Sbjct: 4   TAYKPYIDAEFESLMERIYPPRVCVDNETYQDCTLIKVDSANKQGILLEMVQVLTDLDLV 63

Query: 66  ISKSYICSDGGWFMD 22
           ISKSYI SDGGWFM+
Sbjct: 64  ISKSYISSDGGWFME 78


>gb|ADE76039.1| unknown [Picea sitchensis]
          Length = 454

 Score =  118 bits (296), Expect = 4e-25
 Identities = 56/77 (72%), Positives = 66/77 (85%)
 Frame = -3

Query: 252 MNSGYKPYLNAEFEALIERIHPPSVSIDNETCKDCTLVKVDSANRHGILLEMVQVLTDLD 73
           M S   PY + +FE+L +RIHPP V IDN+TC+DC+LVKV+SANRHGILLE+VQVLTDLD
Sbjct: 1   MESVCWPYFDPDFESLNQRIHPPMVCIDNDTCEDCSLVKVESANRHGILLEVVQVLTDLD 60

Query: 72  LIISKSYICSDGGWFMD 22
           LIISK+YI SDG WFMD
Sbjct: 61  LIISKAYISSDGRWFMD 77


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