BLASTX nr result
ID: Coptis23_contig00019704
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00019704 (235 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278511.1| PREDICTED: protein sym-1 [Vitis vinifera] gi... 108 3e-22 emb|CAN61275.1| hypothetical protein VITISV_033632 [Vitis vinifera] 108 3e-22 ref|XP_002323213.1| predicted protein [Populus trichocarpa] gi|2... 104 7e-21 ref|XP_002308859.1| predicted protein [Populus trichocarpa] gi|2... 104 9e-21 ref|XP_003554094.1| PREDICTED: protein sym-1-like [Glycine max] 100 2e-19 >ref|XP_002278511.1| PREDICTED: protein sym-1 [Vitis vinifera] gi|297741716|emb|CBI32848.3| unnamed protein product [Vitis vinifera] Length = 293 Score = 108 bits (271), Expect = 3e-22 Identities = 54/77 (70%), Positives = 59/77 (76%) Frame = +2 Query: 5 TLDVKRXXXXXXXXXXXXXPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFF 184 +LD+KR PTLHFWYL LSK+V PGASGAFLRLLLDQFLFSPIFIG F Sbjct: 159 SLDLKRTFLFTLLGLVLVGPTLHFWYLYLSKLVTIPGASGAFLRLLLDQFLFSPIFIGVF 218 Query: 185 LCTLLTLEGRPSQIVPK 235 L TL+TLEGRPSQ+VPK Sbjct: 219 LSTLVTLEGRPSQVVPK 235 >emb|CAN61275.1| hypothetical protein VITISV_033632 [Vitis vinifera] Length = 404 Score = 108 bits (271), Expect = 3e-22 Identities = 54/77 (70%), Positives = 59/77 (76%) Frame = +2 Query: 5 TLDVKRXXXXXXXXXXXXXPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFF 184 +LD+KR PTLHFWYL LSK+V PGASGAFLRLLLDQFLFSPIFIG F Sbjct: 249 SLDLKRTFLFTLLGLVLVGPTLHFWYLYLSKLVTIPGASGAFLRLLLDQFLFSPIFIGVF 308 Query: 185 LCTLLTLEGRPSQIVPK 235 L TL+TLEGRPSQ+VPK Sbjct: 309 LSTLVTLEGRPSQVVPK 325 >ref|XP_002323213.1| predicted protein [Populus trichocarpa] gi|222867843|gb|EEF04974.1| predicted protein [Populus trichocarpa] Length = 264 Score = 104 bits (260), Expect = 7e-21 Identities = 51/77 (66%), Positives = 57/77 (74%) Frame = +2 Query: 5 TLDVKRXXXXXXXXXXXXXPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFF 184 +LD+KR PTLH WYL LSKMV PGASGAFLRLL DQF+FSPIFIG F Sbjct: 130 SLDLKRTFLFTLLGLVLVGPTLHIWYLYLSKMVTVPGASGAFLRLLADQFVFSPIFIGVF 189 Query: 185 LCTLLTLEGRPSQIVPK 235 L TL+TLEGRPSQ++PK Sbjct: 190 LSTLVTLEGRPSQVIPK 206 >ref|XP_002308859.1| predicted protein [Populus trichocarpa] gi|222854835|gb|EEE92382.1| predicted protein [Populus trichocarpa] Length = 286 Score = 104 bits (259), Expect = 9e-21 Identities = 50/77 (64%), Positives = 59/77 (76%) Frame = +2 Query: 5 TLDVKRXXXXXXXXXXXXXPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFF 184 +LD+KR PTLHFWYL LSK+V PGASGAFLRLL+DQF+FSPIFIG F Sbjct: 152 SLDLKRTFVFTFLGLVLVGPTLHFWYLYLSKLVTLPGASGAFLRLLVDQFVFSPIFIGVF 211 Query: 185 LCTLLTLEGRPSQIVPK 235 L TL+TLEGRPS+++PK Sbjct: 212 LSTLVTLEGRPSEVLPK 228 >ref|XP_003554094.1| PREDICTED: protein sym-1-like [Glycine max] Length = 277 Score = 99.8 bits (247), Expect = 2e-19 Identities = 50/77 (64%), Positives = 55/77 (71%) Frame = +2 Query: 5 TLDVKRXXXXXXXXXXXXXPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFF 184 +LD KR PTLHFWYL LSK+V PGASGA LRL+LDQFLFSPIFIG F Sbjct: 143 SLDFKRTFVFTFLGFALVGPTLHFWYLYLSKLVTLPGASGALLRLVLDQFLFSPIFIGVF 202 Query: 185 LCTLLTLEGRPSQIVPK 235 L TL+TLEG PS+ VPK Sbjct: 203 LSTLVTLEGNPSRAVPK 219