BLASTX nr result

ID: Coptis23_contig00019704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019704
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278511.1| PREDICTED: protein sym-1 [Vitis vinifera] gi...   108   3e-22
emb|CAN61275.1| hypothetical protein VITISV_033632 [Vitis vinifera]   108   3e-22
ref|XP_002323213.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21
ref|XP_002308859.1| predicted protein [Populus trichocarpa] gi|2...   104   9e-21
ref|XP_003554094.1| PREDICTED: protein sym-1-like [Glycine max]       100   2e-19

>ref|XP_002278511.1| PREDICTED: protein sym-1 [Vitis vinifera]
           gi|297741716|emb|CBI32848.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/77 (70%), Positives = 59/77 (76%)
 Frame = +2

Query: 5   TLDVKRXXXXXXXXXXXXXPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFF 184
           +LD+KR             PTLHFWYL LSK+V  PGASGAFLRLLLDQFLFSPIFIG F
Sbjct: 159 SLDLKRTFLFTLLGLVLVGPTLHFWYLYLSKLVTIPGASGAFLRLLLDQFLFSPIFIGVF 218

Query: 185 LCTLLTLEGRPSQIVPK 235
           L TL+TLEGRPSQ+VPK
Sbjct: 219 LSTLVTLEGRPSQVVPK 235


>emb|CAN61275.1| hypothetical protein VITISV_033632 [Vitis vinifera]
          Length = 404

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/77 (70%), Positives = 59/77 (76%)
 Frame = +2

Query: 5   TLDVKRXXXXXXXXXXXXXPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFF 184
           +LD+KR             PTLHFWYL LSK+V  PGASGAFLRLLLDQFLFSPIFIG F
Sbjct: 249 SLDLKRTFLFTLLGLVLVGPTLHFWYLYLSKLVTIPGASGAFLRLLLDQFLFSPIFIGVF 308

Query: 185 LCTLLTLEGRPSQIVPK 235
           L TL+TLEGRPSQ+VPK
Sbjct: 309 LSTLVTLEGRPSQVVPK 325


>ref|XP_002323213.1| predicted protein [Populus trichocarpa] gi|222867843|gb|EEF04974.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  104 bits (260), Expect = 7e-21
 Identities = 51/77 (66%), Positives = 57/77 (74%)
 Frame = +2

Query: 5   TLDVKRXXXXXXXXXXXXXPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFF 184
           +LD+KR             PTLH WYL LSKMV  PGASGAFLRLL DQF+FSPIFIG F
Sbjct: 130 SLDLKRTFLFTLLGLVLVGPTLHIWYLYLSKMVTVPGASGAFLRLLADQFVFSPIFIGVF 189

Query: 185 LCTLLTLEGRPSQIVPK 235
           L TL+TLEGRPSQ++PK
Sbjct: 190 LSTLVTLEGRPSQVIPK 206


>ref|XP_002308859.1| predicted protein [Populus trichocarpa] gi|222854835|gb|EEE92382.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  104 bits (259), Expect = 9e-21
 Identities = 50/77 (64%), Positives = 59/77 (76%)
 Frame = +2

Query: 5   TLDVKRXXXXXXXXXXXXXPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFF 184
           +LD+KR             PTLHFWYL LSK+V  PGASGAFLRLL+DQF+FSPIFIG F
Sbjct: 152 SLDLKRTFVFTFLGLVLVGPTLHFWYLYLSKLVTLPGASGAFLRLLVDQFVFSPIFIGVF 211

Query: 185 LCTLLTLEGRPSQIVPK 235
           L TL+TLEGRPS+++PK
Sbjct: 212 LSTLVTLEGRPSEVLPK 228


>ref|XP_003554094.1| PREDICTED: protein sym-1-like [Glycine max]
          Length = 277

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/77 (64%), Positives = 55/77 (71%)
 Frame = +2

Query: 5   TLDVKRXXXXXXXXXXXXXPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFF 184
           +LD KR             PTLHFWYL LSK+V  PGASGA LRL+LDQFLFSPIFIG F
Sbjct: 143 SLDFKRTFVFTFLGFALVGPTLHFWYLYLSKLVTLPGASGALLRLVLDQFLFSPIFIGVF 202

Query: 185 LCTLLTLEGRPSQIVPK 235
           L TL+TLEG PS+ VPK
Sbjct: 203 LSTLVTLEGNPSRAVPK 219


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