BLASTX nr result

ID: Coptis23_contig00019703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019703
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546932.1| PREDICTED: probable polygalacturonase At1g80...   308   7e-82
ref|XP_003597864.1| hypothetical protein MTR_2g103410 [Medicago ...   308   9e-82
gb|ABM67700.1| polygalacturonase [Citrus sinensis]                    301   1e-79
ref|XP_002281827.2| PREDICTED: probable polygalacturonase At1g80...   294   1e-77
emb|CBI36284.3| unnamed protein product [Vitis vinifera]              294   1e-77

>ref|XP_003546932.1| PREDICTED: probable polygalacturonase At1g80170-like [Glycine max]
          Length = 443

 Score =  308 bits (789), Expect = 7e-82
 Identities = 144/229 (62%), Positives = 179/229 (78%)
 Frame = +2

Query: 2   AVTFHRCMDLKISNVMTLNSQQMHMAFTNCVRVKASLLKVIAPVDSPNTDGIHISASSKV 181
           A+TFHRC DLK+ N+M +NSQ+MH++FTNC+R+ AS LKV+AP  SPNTDGIHISA+  V
Sbjct: 177 AMTFHRCKDLKVRNLMLINSQRMHLSFTNCMRIVASHLKVLAPAFSPNTDGIHISATKGV 236

Query: 182 EITNSIIKTGDDCXXXXXXXXXXXXXXXXCMAGHGISIGSLGKSNSWSAVNDVSVDGALL 361
           E+ +S+I+TGDDC                C  GHGISIGSLGKS  W  V +V VDG  L
Sbjct: 237 EVRDSVIRTGDDCISIVRNSSRVWIRNISCGPGHGISIGSLGKSKKWEKVQNVIVDGVYL 296

Query: 362 ANTKNGVRIKTWQGGSGFSRTISFRNVLMENVSNPIIIDQYYCDSFLPCSNQTSAVKVED 541
            NT NGVRIKTWQGGSGF+  I+F+++LMENVSNPII+DQYYCDS  PC N+TSAV+VE+
Sbjct: 297 YNTDNGVRIKTWQGGSGFASKITFQHILMENVSNPIIVDQYYCDSRNPCKNETSAVRVEN 356

Query: 542 ISFVNITGTSASEEAIRFACSDTYPCEEIYVENIQLSSYLGGYTTSFCW 688
           ISF++I GTSA+EEAI+F+CSD +PCE +Y+ENI L+S  GG T+SFCW
Sbjct: 357 ISFIDIQGTSATEEAIKFSCSDAFPCEGLYLENIFLASCFGGNTSSFCW 405


>ref|XP_003597864.1| hypothetical protein MTR_2g103410 [Medicago truncatula]
           gi|87162606|gb|ABD28401.1| Glycoside hydrolase, family
           28 [Medicago truncatula] gi|355486912|gb|AES68115.1|
           hypothetical protein MTR_2g103410 [Medicago truncatula]
          Length = 451

 Score =  308 bits (788), Expect = 9e-82
 Identities = 148/229 (64%), Positives = 175/229 (76%)
 Frame = +2

Query: 2   AVTFHRCMDLKISNVMTLNSQQMHMAFTNCVRVKASLLKVIAPVDSPNTDGIHISASSKV 181
           A+TFH+C  LK+ N+  LNSQ+MH+AFT+C+RV AS LKV+AP  SPNTDGIHISA+  V
Sbjct: 185 ALTFHKCKSLKVRNLTVLNSQKMHIAFTSCMRVVASRLKVLAPASSPNTDGIHISATKGV 244

Query: 182 EITNSIIKTGDDCXXXXXXXXXXXXXXXXCMAGHGISIGSLGKSNSWSAVNDVSVDGALL 361
           EI +S+I+TGDDC                C  GHGISIGSLGKSN W  + +V VDGA L
Sbjct: 245 EIRDSLIRTGDDCISIVRNSSRVWIRNISCGPGHGISIGSLGKSNVWEKIQNVIVDGAYL 304

Query: 362 ANTKNGVRIKTWQGGSGFSRTISFRNVLMENVSNPIIIDQYYCDSFLPCSNQTSAVKVED 541
            NT NGVRIKTWQGGSGF+  I+F+N+LMENVSNPIIIDQYYCDS  PC NQTSAV+V +
Sbjct: 305 YNTDNGVRIKTWQGGSGFASKITFQNILMENVSNPIIIDQYYCDSRHPCKNQTSAVQVGN 364

Query: 542 ISFVNITGTSASEEAIRFACSDTYPCEEIYVENIQLSSYLGGYTTSFCW 688
           ISF+NI GTSA+EE I+FACSD  PCE +Y+ENI L SY GG T S+CW
Sbjct: 365 ISFINIQGTSATEETIKFACSDASPCEGLYLENIFLRSYFGGNTRSYCW 413


>gb|ABM67700.1| polygalacturonase [Citrus sinensis]
          Length = 445

 Score =  301 bits (770), Expect = 1e-79
 Identities = 144/229 (62%), Positives = 179/229 (78%)
 Frame = +2

Query: 2   AVTFHRCMDLKISNVMTLNSQQMHMAFTNCVRVKASLLKVIAPVDSPNTDGIHISASSKV 181
           A+TFH+C +LK+ N+  +NSQQMH+AFTNC+RV  S L+VIAP +SPNTDGIHISAS  V
Sbjct: 181 AITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGV 240

Query: 182 EITNSIIKTGDDCXXXXXXXXXXXXXXXXCMAGHGISIGSLGKSNSWSAVNDVSVDGALL 361
           E+ NSI+ TGDDC                C  GHGISIGSLGKSNS   ++D+ V GAL+
Sbjct: 241 EVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKSNSSVRIHDIMVYGALI 300

Query: 362 ANTKNGVRIKTWQGGSGFSRTISFRNVLMENVSNPIIIDQYYCDSFLPCSNQTSAVKVED 541
           +NT+NGVRIKTWQGGSG +  I F +VLM+NVSNPIIIDQYYCDS +PC+NQTSAVKVE+
Sbjct: 301 SNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSNPIIIDQYYCDSPVPCANQTSAVKVEN 360

Query: 542 ISFVNITGTSASEEAIRFACSDTYPCEEIYVENIQLSSYLGGYTTSFCW 688
           I+F++I GTSA+EEAI+FACSD  PCE +++E++QL S+ GG   SFCW
Sbjct: 361 ITFIHIKGTSATEEAIKFACSDDSPCEGLFLEDVQLVSHSGGIAKSFCW 409


>ref|XP_002281827.2| PREDICTED: probable polygalacturonase At1g80170-like [Vitis
           vinifera]
          Length = 452

 Score =  294 bits (752), Expect = 1e-77
 Identities = 137/232 (59%), Positives = 176/232 (75%)
 Frame = +2

Query: 2   AVTFHRCMDLKISNVMTLNSQQMHMAFTNCVRVKASLLKVIAPVDSPNTDGIHISASSKV 181
           A+ FHRC  L++ ++  +NSQ+ H+AFTN  R+  S +K+IAP  SPNTDG+HIS+SS+V
Sbjct: 188 AIIFHRCKKLRVRDIALINSQRTHIAFTNSFRIVVSGIKMIAPASSPNTDGLHISSSSRV 247

Query: 182 EITNSIIKTGDDCXXXXXXXXXXXXXXXXCMAGHGISIGSLGKSNSWSAVNDVSVDGALL 361
            I +SII+TGDDC                C  GHGIS+GSLG  NSW+ V+DV VD A L
Sbjct: 248 NIKDSIIRTGDDCISIVGNSSIIRIKNIACGPGHGISVGSLGMGNSWAQVHDVIVDQAFL 307

Query: 362 ANTKNGVRIKTWQGGSGFSRTISFRNVLMENVSNPIIIDQYYCDSFLPCSNQTSAVKVED 541
           A+TKNG+RIKTWQGG GF+  I+F+NVLMENVS+PIIIDQYYCDS  PC NQT AVKV +
Sbjct: 308 AHTKNGLRIKTWQGGRGFASQITFQNVLMENVSHPIIIDQYYCDSLTPCLNQTLAVKVAN 367

Query: 542 ISFVNITGTSASEEAIRFACSDTYPCEEIYVENIQLSSYLGGYTTSFCWNVK 697
           IS+V+I GTSA+EE++RFACSD++PCE++Y+E +QL SY G  T+SFCW  +
Sbjct: 368 ISYVSIKGTSATEESVRFACSDSFPCEKLYLEEVQLLSYTGKNTSSFCWEAQ 419


>emb|CBI36284.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  294 bits (752), Expect = 1e-77
 Identities = 137/232 (59%), Positives = 176/232 (75%)
 Frame = +2

Query: 2   AVTFHRCMDLKISNVMTLNSQQMHMAFTNCVRVKASLLKVIAPVDSPNTDGIHISASSKV 181
           A+ FHRC  L++ ++  +NSQ+ H+AFTN  R+  S +K+IAP  SPNTDG+HIS+SS+V
Sbjct: 177 AIIFHRCKKLRVRDIALINSQRTHIAFTNSFRIVVSGIKMIAPASSPNTDGLHISSSSRV 236

Query: 182 EITNSIIKTGDDCXXXXXXXXXXXXXXXXCMAGHGISIGSLGKSNSWSAVNDVSVDGALL 361
            I +SII+TGDDC                C  GHGIS+GSLG  NSW+ V+DV VD A L
Sbjct: 237 NIKDSIIRTGDDCISIVGNSSIIRIKNIACGPGHGISVGSLGMGNSWAQVHDVIVDQAFL 296

Query: 362 ANTKNGVRIKTWQGGSGFSRTISFRNVLMENVSNPIIIDQYYCDSFLPCSNQTSAVKVED 541
           A+TKNG+RIKTWQGG GF+  I+F+NVLMENVS+PIIIDQYYCDS  PC NQT AVKV +
Sbjct: 297 AHTKNGLRIKTWQGGRGFASQITFQNVLMENVSHPIIIDQYYCDSLTPCLNQTLAVKVAN 356

Query: 542 ISFVNITGTSASEEAIRFACSDTYPCEEIYVENIQLSSYLGGYTTSFCWNVK 697
           IS+V+I GTSA+EE++RFACSD++PCE++Y+E +QL SY G  T+SFCW  +
Sbjct: 357 ISYVSIKGTSATEESVRFACSDSFPCEKLYLEEVQLLSYTGKNTSSFCWEAQ 408


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