BLASTX nr result

ID: Coptis23_contig00019676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019676
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331024.1| Cl-channel clc-7 [Populus trichocarpa] gi|22...   258   5e-67
ref|XP_002263587.1| PREDICTED: chloride channel ClC5 [Vitis vini...   251   3e-65
emb|CBI25542.3| unnamed protein product [Vitis vinifera]              251   3e-65
ref|XP_002870407.1| hypothetical protein ARALYDRAFT_493576 [Arab...   249   2e-64
ref|XP_002530769.1| chloride channel clc, putative [Ricinus comm...   248   4e-64

>ref|XP_002331024.1| Cl-channel clc-7 [Populus trichocarpa] gi|222872954|gb|EEF10085.1|
           Cl-channel clc-7 [Populus trichocarpa]
          Length = 775

 Score =  258 bits (658), Expect = 5e-67
 Identities = 126/151 (83%), Positives = 141/151 (93%)
 Frame = +2

Query: 2   NMMLARRFGTAFGVFATSNLLLTLFSSIITAFVSPTAAGSGIPEVKAYLNGVDVPGIFSF 181
           NMMLA+RFG AF VF+ SNL+LTLF+SIITAF++P AAGSGIPEVKAYLNGVD PGIFS 
Sbjct: 112 NMMLAKRFGMAFLVFSVSNLILTLFASIITAFIAPAAAGSGIPEVKAYLNGVDAPGIFSL 171

Query: 182 RTLVIKIIGNIAAVSSSLVVGKAGPMVHTGACIAALLAQGGSRKYGLTWRWLRFFKNDRD 361
           R+LVIKIIG+I+AVSSSL VGKAGPMVHTGAC+AALL QGGS+++ LTWRWLRFFKNDRD
Sbjct: 172 RSLVIKIIGSISAVSSSLFVGKAGPMVHTGACVAALLGQGGSKRFKLTWRWLRFFKNDRD 231

Query: 362 RRDLVTCGSASGITAAFRSPVGGVLFALEEM 454
           RRDLVTCGSA+GI AAFR+PVGGVLFALEEM
Sbjct: 232 RRDLVTCGSAAGIAAAFRAPVGGVLFALEEM 262


>ref|XP_002263587.1| PREDICTED: chloride channel ClC5 [Vitis vinifera]
           gi|301318136|gb|ADK66983.1| chloride channel ClC5 [Vitis
           vinifera]
          Length = 770

 Score =  251 bits (642), Expect = 3e-65
 Identities = 118/151 (78%), Positives = 139/151 (92%)
 Frame = +2

Query: 2   NMMLARRFGTAFGVFATSNLLLTLFSSIITAFVSPTAAGSGIPEVKAYLNGVDVPGIFSF 181
           NMML +R+G AF VF +SN +LTLF+SIITAF++P AAGSGIPEVKAYLNGVD PGIF+ 
Sbjct: 109 NMMLVKRYGMAFLVFFSSNFVLTLFASIITAFIAPAAAGSGIPEVKAYLNGVDAPGIFTL 168

Query: 182 RTLVIKIIGNIAAVSSSLVVGKAGPMVHTGACIAALLAQGGSRKYGLTWRWLRFFKNDRD 361
           +TL++KI+G+I AVSSSL++GKAGPMVHTGAC+AALL QGGSRKYGLTWRWLR+FKNDRD
Sbjct: 169 KTLLVKIVGSITAVSSSLLIGKAGPMVHTGACVAALLGQGGSRKYGLTWRWLRYFKNDRD 228

Query: 362 RRDLVTCGSASGITAAFRSPVGGVLFALEEM 454
           RRD VTCGSA+GI A+FR+PVGGVLF+LEEM
Sbjct: 229 RRDFVTCGSAAGIAASFRAPVGGVLFSLEEM 259


>emb|CBI25542.3| unnamed protein product [Vitis vinifera]
          Length = 772

 Score =  251 bits (642), Expect = 3e-65
 Identities = 118/151 (78%), Positives = 139/151 (92%)
 Frame = +2

Query: 2   NMMLARRFGTAFGVFATSNLLLTLFSSIITAFVSPTAAGSGIPEVKAYLNGVDVPGIFSF 181
           NMML +R+G AF VF +SN +LTLF+SIITAF++P AAGSGIPEVKAYLNGVD PGIF+ 
Sbjct: 109 NMMLVKRYGMAFLVFFSSNFVLTLFASIITAFIAPAAAGSGIPEVKAYLNGVDAPGIFTL 168

Query: 182 RTLVIKIIGNIAAVSSSLVVGKAGPMVHTGACIAALLAQGGSRKYGLTWRWLRFFKNDRD 361
           +TL++KI+G+I AVSSSL++GKAGPMVHTGAC+AALL QGGSRKYGLTWRWLR+FKNDRD
Sbjct: 169 KTLLVKIVGSITAVSSSLLIGKAGPMVHTGACVAALLGQGGSRKYGLTWRWLRYFKNDRD 228

Query: 362 RRDLVTCGSASGITAAFRSPVGGVLFALEEM 454
           RRD VTCGSA+GI A+FR+PVGGVLF+LEEM
Sbjct: 229 RRDFVTCGSAAGIAASFRAPVGGVLFSLEEM 259


>ref|XP_002870407.1| hypothetical protein ARALYDRAFT_493576 [Arabidopsis lyrata subsp.
           lyrata] gi|297316243|gb|EFH46666.1| hypothetical protein
           ARALYDRAFT_493576 [Arabidopsis lyrata subsp. lyrata]
          Length = 763

 Score =  249 bits (636), Expect = 2e-64
 Identities = 119/151 (78%), Positives = 139/151 (92%)
 Frame = +2

Query: 2   NMMLARRFGTAFGVFATSNLLLTLFSSIITAFVSPTAAGSGIPEVKAYLNGVDVPGIFSF 181
           NMM+A RFG  F VF+ +NL+LTLF+S+ITAFV+P AAGSGIPEVKAYLNGVD P IFS 
Sbjct: 105 NMMIAGRFGMGFVVFSVTNLVLTLFASVITAFVAPAAAGSGIPEVKAYLNGVDAPEIFSL 164

Query: 182 RTLVIKIIGNIAAVSSSLVVGKAGPMVHTGACIAALLAQGGSRKYGLTWRWLRFFKNDRD 361
           RTLVI+IIGNI+AVS+SL++GKAGPMVHTGAC+A++L QGGS++Y LTWRWLRFFKNDRD
Sbjct: 165 RTLVIQIIGNISAVSASLLIGKAGPMVHTGACVASILGQGGSKRYRLTWRWLRFFKNDRD 224

Query: 362 RRDLVTCGSASGITAAFRSPVGGVLFALEEM 454
           RRDLVTCGSA+GI A+FR+PVGGVLFALEEM
Sbjct: 225 RRDLVTCGSAAGIAASFRAPVGGVLFALEEM 255


>ref|XP_002530769.1| chloride channel clc, putative [Ricinus communis]
           gi|223529685|gb|EEF31629.1| chloride channel clc,
           putative [Ricinus communis]
          Length = 775

 Score =  248 bits (633), Expect = 4e-64
 Identities = 120/151 (79%), Positives = 137/151 (90%)
 Frame = +2

Query: 2   NMMLARRFGTAFGVFATSNLLLTLFSSIITAFVSPTAAGSGIPEVKAYLNGVDVPGIFSF 181
           NMMLA R+G AF VF+ SN +LTLF+SIITA V+P AAGSGIPEVKAYLNGVD PGIFS 
Sbjct: 113 NMMLANRYGMAFAVFSVSNFVLTLFASIITASVAPAAAGSGIPEVKAYLNGVDAPGIFSL 172

Query: 182 RTLVIKIIGNIAAVSSSLVVGKAGPMVHTGACIAALLAQGGSRKYGLTWRWLRFFKNDRD 361
           RTLV+KI+G+I+AVS+SL +GKAGPMVHTG+CIA++L QGGSRKY LTW+WL FFKNDRD
Sbjct: 173 RTLVVKIVGSISAVSASLHIGKAGPMVHTGSCIASILGQGGSRKYKLTWKWLCFFKNDRD 232

Query: 362 RRDLVTCGSASGITAAFRSPVGGVLFALEEM 454
           RRDLVTCGSA+G+ AAFRSPVGGVLFALEEM
Sbjct: 233 RRDLVTCGSAAGMAAAFRSPVGGVLFALEEM 263


Top