BLASTX nr result

ID: Coptis23_contig00019675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019675
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523846.1| conserved hypothetical protein [Ricinus comm...    85   7e-15
ref|XP_002273234.1| PREDICTED: uncharacterized protein LOC100262...    79   4e-13
emb|CAN69049.1| hypothetical protein VITISV_001510 [Vitis vinifera]    77   1e-12
ref|XP_003540808.1| PREDICTED: uncharacterized protein LOC100779...    76   2e-12
gb|ACU18675.1| unknown [Glycine max]                                   76   2e-12

>ref|XP_002523846.1| conserved hypothetical protein [Ricinus communis]
           gi|223536934|gb|EEF38572.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 314

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 33/70 (47%), Positives = 56/70 (80%)
 Frame = +3

Query: 6   DDVLQEFLKERQLTGDLVSKASDILWMKDYLNVIDFEASSLAETPQELQELIEKENESGF 185
           +DVL+ FLKER++ GD +SKASD+ W+++ + ++DF+A+ LA+  QE ++++E ++E GF
Sbjct: 50  EDVLRMFLKEREVNGDFISKASDMFWLREVMELVDFDAAKLADNSQEAEQIMESQDEGGF 109

Query: 186 LKLTKAYKWI 215
           LKLT+  +WI
Sbjct: 110 LKLTRTQEWI 119


>ref|XP_002273234.1| PREDICTED: uncharacterized protein LOC100262096 [Vitis vinifera]
           gi|296084875|emb|CBI28284.3| unnamed protein product
           [Vitis vinifera]
          Length = 315

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 34/71 (47%), Positives = 51/71 (71%)
 Frame = +3

Query: 3   GDDVLQEFLKERQLTGDLVSKASDILWMKDYLNVIDFEASSLAETPQELQELIEKENESG 182
           G+DVL+ F KER+L GD +SKASD+LW ++ +  +D EA +  +TPQ+ + + E E E G
Sbjct: 51  GEDVLRMFFKERELNGDFISKASDMLWQREVMKFVDAEAGTPPDTPQQPEGVKETEYEGG 110

Query: 183 FLKLTKAYKWI 215
           FLKLT+  +W+
Sbjct: 111 FLKLTRTQEWV 121


>emb|CAN69049.1| hypothetical protein VITISV_001510 [Vitis vinifera]
          Length = 305

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/71 (46%), Positives = 51/71 (71%)
 Frame = +3

Query: 3   GDDVLQEFLKERQLTGDLVSKASDILWMKDYLNVIDFEASSLAETPQELQELIEKENESG 182
           G+DVL+ F KER+L GD +SKASD+LW ++ +  ++ EA +  +TPQ+ + + E E E G
Sbjct: 51  GEDVLRMFFKERELNGDFISKASDMLWQREVMKFVNAEAGTPPDTPQQPEGVKETEYEGG 110

Query: 183 FLKLTKAYKWI 215
           FLKLT+  +W+
Sbjct: 111 FLKLTRTQEWV 121


>ref|XP_003540808.1| PREDICTED: uncharacterized protein LOC100779930 [Glycine max]
          Length = 320

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 33/71 (46%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
 Frame = +3

Query: 6   DDVLQEFLKERQLTGDLVSKASDILWMKDYLNVIDFEASSLA-ETPQELQELIEKENESG 182
           +DVLQ F KER+L GD +S+ASD+LW +D+ +  D++ S L   T Q+ +++IE +N++G
Sbjct: 55  EDVLQIFFKERELNGDFISRASDLLWRRDFRSSGDYDISELTNNTSQQTEQIIETDNDAG 114

Query: 183 FLKLTKAYKWI 215
           FLKLT+  +W+
Sbjct: 115 FLKLTRTQEWL 125


>gb|ACU18675.1| unknown [Glycine max]
          Length = 214

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 33/71 (46%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
 Frame = +3

Query: 6   DDVLQEFLKERQLTGDLVSKASDILWMKDYLNVIDFEASSLA-ETPQELQELIEKENESG 182
           +DVLQ F KER+L GD +S+ASD+LW +D+ +  D++ S L   T Q+ +++IE +N++G
Sbjct: 55  EDVLQIFFKERELNGDFISRASDLLWRRDFRSSGDYDISELTNNTSQQTEQIIETDNDAG 114

Query: 183 FLKLTKAYKWI 215
           FLKLT+  +W+
Sbjct: 115 FLKLTRTQEWL 125


Top