BLASTX nr result

ID: Coptis23_contig00019665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019665
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319664.1| predicted protein [Populus trichocarpa] gi|2...    72   7e-19
ref|XP_002325782.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-18
ref|XP_002522003.1| protein with unknown function [Ricinus commu...    67   3e-17
ref|XP_003625388.1| Receptor-like protein kinase [Medicago trunc...    61   4e-17
ref|XP_003553510.1| PREDICTED: leucine-rich repeat receptor-like...    61   4e-17

>ref|XP_002319664.1| predicted protein [Populus trichocarpa] gi|222858040|gb|EEE95587.1|
           predicted protein [Populus trichocarpa]
          Length = 1017

 Score = 71.6 bits (174), Expect(2) = 7e-19
 Identities = 34/47 (72%), Positives = 40/47 (85%)
 Frame = -3

Query: 254 NQLFGKIPAELGYLKNLQLLNVMSNQLTSHIPTELGELTKIEVLELW 114
           NQ+ G+IP E+  LKNLQLLN+MSNQL   IPT+LGELTK+EVLELW
Sbjct: 301 NQISGEIPVEVAELKNLQLLNLMSNQLKGTIPTKLGELTKLEVLELW 347



 Score = 47.0 bits (110), Expect(2) = 7e-19
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = -2

Query: 108 NSLSGPLATNLG*NTPLQWLDVSSNSLS 25
           N L+GPL  NLG N+PLQWLDVSSNSLS
Sbjct: 349 NFLTGPLPENLGQNSPLQWLDVSSNSLS 376


>ref|XP_002325782.1| predicted protein [Populus trichocarpa] gi|222862657|gb|EEF00164.1|
           predicted protein [Populus trichocarpa]
          Length = 1018

 Score = 70.9 bits (172), Expect(2) = 1e-18
 Identities = 34/47 (72%), Positives = 39/47 (82%)
 Frame = -3

Query: 254 NQLFGKIPAELGYLKNLQLLNVMSNQLTSHIPTELGELTKIEVLELW 114
           NQ+ G+IP EL  LKNLQLLN+M NQL   IPT+LGELTK+EVLELW
Sbjct: 302 NQISGEIPVELAELKNLQLLNLMRNQLKGTIPTKLGELTKLEVLELW 348



 Score = 47.0 bits (110), Expect(2) = 1e-18
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = -2

Query: 108 NSLSGPLATNLG*NTPLQWLDVSSNSLS 25
           N L+GPL  NLG N+PLQWLDVSSNSLS
Sbjct: 350 NFLTGPLPENLGQNSPLQWLDVSSNSLS 377


>ref|XP_002522003.1| protein with unknown function [Ricinus communis]
           gi|223538807|gb|EEF40407.1| protein with unknown
           function [Ricinus communis]
          Length = 966

 Score = 66.6 bits (161), Expect(2) = 3e-17
 Identities = 30/47 (63%), Positives = 39/47 (82%)
 Frame = -3

Query: 254 NQLFGKIPAELGYLKNLQLLNVMSNQLTSHIPTELGELTKIEVLELW 114
           NQ+ G+IP E+  LKNLQLLN+M N+LT  IP+++GEL K+EVLELW
Sbjct: 250 NQISGEIPVEIAELKNLQLLNLMCNKLTGPIPSKIGELAKLEVLELW 296



 Score = 46.6 bits (109), Expect(2) = 3e-17
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = -2

Query: 108 NSLSGPLATNLG*NTPLQWLDVSSNSLS 25
           NSL+GPL  NLG N+PL WLDVSSNSLS
Sbjct: 298 NSLTGPLPKNLGENSPLVWLDVSSNSLS 325


>ref|XP_003625388.1| Receptor-like protein kinase [Medicago truncatula]
           gi|355500403|gb|AES81606.1| Receptor-like protein kinase
           [Medicago truncatula]
          Length = 1024

 Score = 61.2 bits (147), Expect(2) = 4e-17
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = -3

Query: 254 NQLFGKIPAELGYLKNLQLLNVMSNQLTSHIPTELGELTKIEVLELWN 111
           N L GKIP E+  LKNL+LLN M NQL+  +P+ LG L ++EV ELWN
Sbjct: 302 NNLSGKIPDEMSLLKNLKLLNFMGNQLSGFVPSGLGNLPQLEVFELWN 349



 Score = 51.6 bits (122), Expect(2) = 4e-17
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = -2

Query: 111 HNSLSGPLATNLG*NTPLQWLDVSSNSLS 25
           +NSLSGPL +NLG N+PLQWLDVSSNSLS
Sbjct: 349 NNSLSGPLPSNLGENSPLQWLDVSSNSLS 377


>ref|XP_003553510.1| PREDICTED: leucine-rich repeat receptor-like protein kinase
           PXL2-like [Glycine max]
          Length = 1018

 Score = 61.2 bits (147), Expect(2) = 4e-17
 Identities = 27/48 (56%), Positives = 37/48 (77%)
 Frame = -3

Query: 254 NQLFGKIPAELGYLKNLQLLNVMSNQLTSHIPTELGELTKIEVLELWN 111
           N L GKIP+E+  LKNL+LLN M N+L+  +P+  G+L ++EVLELWN
Sbjct: 299 NMLSGKIPSEISQLKNLKLLNFMGNKLSGPVPSGFGDLQQLEVLELWN 346



 Score = 51.6 bits (122), Expect(2) = 4e-17
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = -2

Query: 111 HNSLSGPLATNLG*NTPLQWLDVSSNSLS 25
           +NSLSGPL +NLG N+PLQWLDVSSNSLS
Sbjct: 346 NNSLSGPLPSNLGKNSPLQWLDVSSNSLS 374


Top