BLASTX nr result

ID: Coptis23_contig00019654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019654
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274136.2| PREDICTED: uncharacterized protein At1g76660...    50   1e-06

>ref|XP_002274136.2| PREDICTED: uncharacterized protein At1g76660-like [Vitis vinifera]
          Length = 484

 Score = 49.7 bits (117), Expect(2) = 1e-06
 Identities = 26/49 (53%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = -3

Query: 239 PISGTSGDCLSSFFPEREFPAKW--AAXXXXXXXXXXXXSRLFGLDTGT 99
           PIS TSGDCLSS FPEREFP +W  +              RLFGLDT +
Sbjct: 208 PISRTSGDCLSSSFPEREFPPRWDPSISPQNAKYPRNGSGRLFGLDTAS 256



 Score = 27.3 bits (59), Expect(2) = 1e-06
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 75  LSRDTTFFYPAASPQFHLDQARTS 4
           +S+D+ FF PA   QF+LD  + S
Sbjct: 259 ISQDSNFFCPATFAQFYLDHTQQS 282


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