BLASTX nr result

ID: Coptis23_contig00019652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019652
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593097.1| Separin [Medicago truncatula] gi|355482145|g...    60   6e-12
gb|ABN08432.1| Peptidase C50, separase [Medicago truncatula]           60   6e-12
ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259...    69   3e-10
ref|XP_002867740.1| hypothetical protein ARALYDRAFT_492569 [Arab...    54   2e-09
ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223...    66   3e-09

>ref|XP_003593097.1| Separin [Medicago truncatula] gi|355482145|gb|AES63348.1| Separin
            [Medicago truncatula]
          Length = 2216

 Score = 60.1 bits (144), Expect(2) = 6e-12
 Identities = 29/39 (74%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
 Frame = -2

Query: 149  RSSIASFMSQAREACVFPFLIGASPVCYGVPTGI-RKKD 36
            R  I +FM QAR  C  PFLIGASPVCYGVPTGI RKKD
Sbjct: 2177 RRKIGAFMGQARNVCKLPFLIGASPVCYGVPTGIWRKKD 2215



 Score = 35.0 bits (79), Expect(2) = 6e-12
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
 Frame = -3

Query: 427  RFGKTVLSACLKERSTLS---HECRTLVDELESVSIGSSEVSATRIASKGTKL---RNDN 266
            RFGK +  A LKERS +     +C  L +ELE++++   +    R   K   L    ND+
Sbjct: 2110 RFGKAMFDAWLKERSKVDIQCLQCNLLSEELEAMNLKGGKGRGKRKVPKKKSLELPENDS 2169

Query: 265  INSRC 251
            ++++C
Sbjct: 2170 LSTKC 2174


>gb|ABN08432.1| Peptidase C50, separase [Medicago truncatula]
          Length = 742

 Score = 60.1 bits (144), Expect(2) = 6e-12
 Identities = 29/39 (74%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
 Frame = -2

Query: 149 RSSIASFMSQAREACVFPFLIGASPVCYGVPTGI-RKKD 36
           R  I +FM QAR  C  PFLIGASPVCYGVPTGI RKKD
Sbjct: 703 RRKIGAFMGQARNVCKLPFLIGASPVCYGVPTGIWRKKD 741



 Score = 35.0 bits (79), Expect(2) = 6e-12
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
 Frame = -3

Query: 427 RFGKTVLSACLKERSTLS---HECRTLVDELESVSIGSSEVSATRIASKGTKL---RNDN 266
           RFGK +  A LKERS +     +C  L +ELE++++   +    R   K   L    ND+
Sbjct: 636 RFGKAMFDAWLKERSKVDIQCLQCNLLSEELEAMNLKGGKGRGKRKVPKKKSLELPENDS 695

Query: 265 INSRC 251
           ++++C
Sbjct: 696 LSTKC 700


>ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259948 [Vitis vinifera]
          Length = 2197

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/37 (86%), Positives = 32/37 (86%)
 Frame = -2

Query: 149  RSSIASFMSQAREACVFPFLIGASPVCYGVPTGIRKK 39
            R  I SFMSQAREAC  PFLIGASPVCYGVPTGIRKK
Sbjct: 2158 RPKIGSFMSQAREACTLPFLIGASPVCYGVPTGIRKK 2194


>ref|XP_002867740.1| hypothetical protein ARALYDRAFT_492569 [Arabidopsis lyrata subsp.
            lyrata] gi|297313576|gb|EFH43999.1| hypothetical protein
            ARALYDRAFT_492569 [Arabidopsis lyrata subsp. lyrata]
          Length = 2186

 Score = 54.3 bits (129), Expect(2) = 2e-09
 Identities = 23/37 (62%), Positives = 29/37 (78%)
 Frame = -2

Query: 149  RSSIASFMSQAREACVFPFLIGASPVCYGVPTGIRKK 39
            R  I SF++ AR+AC   +LIGA+PVCYGVPTGI +K
Sbjct: 2136 RRKIGSFIAAARDACTLQYLIGAAPVCYGVPTGITRK 2172



 Score = 32.0 bits (71), Expect(2) = 2e-09
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
 Frame = -3

Query: 427  RFGKTVLSACLKERSTLSHE-----CRTLVDELESVSI-GSSEVSATRIASKGTKLRNDN 266
            RFGK +L A L+ERS    E     C +L +EL ++++ G++    +R  S   K    N
Sbjct: 2063 RFGKALLEAWLQERSDSCSEGGCSQCESLANELAAMNLKGNNNTKRSRKPSSRNKPAQSN 2122

Query: 265  INSRCK 248
            ++   K
Sbjct: 2123 VDGSGK 2128


>ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223531543|gb|EEF33373.1|
            separase, putative [Ricinus communis]
          Length = 2153

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/40 (82%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
 Frame = -2

Query: 149  RSSIASFMSQAREACVFPFLIGASPVCYGVPTGI-RKKDL 33
            R  I SFMSQAREAC  P+LIGASPVCYGVPTGI RKKDL
Sbjct: 2114 RPKIGSFMSQAREACRLPYLIGASPVCYGVPTGIRRKKDL 2153


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