BLASTX nr result

ID: Coptis23_contig00019649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019649
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321500.1| predicted protein [Populus trichocarpa] gi|2...    55   4e-06

>ref|XP_002321500.1| predicted protein [Populus trichocarpa] gi|222868496|gb|EEF05627.1|
            predicted protein [Populus trichocarpa]
          Length = 789

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 48/144 (33%), Positives = 65/144 (45%), Gaps = 24/144 (16%)
 Frame = -1

Query: 364  AITLAFILSDIWRKEGSSAFISARKNSNVVSLTES--------DDVESGKIQGTLLEKDE 209
            AI  AFILSDI +KEG + F S R+N  V SL E         + +         +E + 
Sbjct: 638  AIISAFILSDILKKEGYNGFTSNRENLEVDSLVEKAKGFHEEPEQISLTAASEGNMELNV 697

Query: 208  LAEKGSLVLAEK------GENKKCGDMVKN--------DVSSLCYGNVVKNNASSLCYGN 71
               KGS+V +        G    CGDMV++           S C G++V  N+     G+
Sbjct: 698  DVAKGSIVRSGNCGGGCGGCGSGCGDMVRSGNCGGGCGGCGSGC-GDMVSGNSGDSGCGD 756

Query: 70   VVKSNASSFCG--GGSCADGYGNV 5
             +KS  S  CG  GG C  G GN+
Sbjct: 757  TMKSGNSGGCGGCGGGCGGGCGNM 780


Top