BLASTX nr result

ID: Coptis23_contig00019648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019648
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514768.1| endo-1,4-beta-glucanase, putative [Ricinus c...   118   2e-29
gb|ACT54547.1| endo-1,4-beta-glucanase [Dimocarpus longan]            111   2e-28
ref|XP_004169320.1| PREDICTED: endoglucanase 7-like [Cucumis sat...   112   2e-27
ref|XP_004152840.1| PREDICTED: endoglucanase 7-like [Cucumis sat...   112   2e-27
ref|XP_002312211.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-26

>ref|XP_002514768.1| endo-1,4-beta-glucanase, putative [Ricinus communis]
           gi|223545819|gb|EEF47322.1| endo-1,4-beta-glucanase,
           putative [Ricinus communis]
          Length = 624

 Score =  118 bits (296), Expect(2) = 2e-29
 Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 11/107 (10%)
 Frame = +1

Query: 97  HMDRRLYETQQSWLLGLQVKKKKNYVDFGCIVGSYKALQWTIVAILIAFLVIGLPVILSK 276
           H +  L ETQQSWLL  Q  KKK Y+DFGCIV S+KA +WT+ +ILIAFLVI LP I++K
Sbjct: 43  HHNHNLDETQQSWLLYPQETKKKKYIDFGCIVCSHKAFKWTLYSILIAFLVIALPTIVAK 102

Query: 277 -----------EDDYSKALRSALLFFNAEKSGPLPKDNNVSWRGDIG 384
                       D+Y+ AL  ALLFFNA++SG LPK+N + WRGD G
Sbjct: 103 TLPKHKSSPPPPDNYTLALHKALLFFNAQRSGKLPKNNGIPWRGDSG 149



 Score = 37.0 bits (84), Expect(2) = 2e-29
 Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
 Frame = +2

Query: 392 SDAKRGLLGGYNDAGHN-SFHYRMAFSMTIL 481
           +D K GL GGY DAG N  FH+ MA++MT+L
Sbjct: 156 TDFKAGLDGGYYDAGDNIKFHFPMAYTMTML 186


>gb|ACT54547.1| endo-1,4-beta-glucanase [Dimocarpus longan]
          Length = 628

 Score =  111 bits (277), Expect(2) = 2e-28
 Identities = 56/102 (54%), Positives = 71/102 (69%), Gaps = 11/102 (10%)
 Frame = +1

Query: 112 LYETQQSWLLGLQVKKKKNYVDFGCIVGSYKALQWTIVAILIAFLVIGLPVILSK----- 276
           L ETQQSWLLG    KKK YVD GC+V S KAL+WT+ + +IAF+VI LP+I++K     
Sbjct: 51  LDETQQSWLLGPPEAKKKKYVDLGCVVCSRKALKWTLWSFVIAFIVIALPIIIAKTIPKH 110

Query: 277 ------EDDYSKALRSALLFFNAEKSGPLPKDNNVSWRGDIG 384
                  D+Y+ AL  ALLFFNA+KSG LPK+N + WRG+ G
Sbjct: 111 KPRPPPPDNYTLALHKALLFFNAQKSGKLPKNNGIPWRGNSG 152



 Score = 40.8 bits (94), Expect(2) = 2e-28
 Identities = 19/31 (61%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
 Frame = +2

Query: 392 SDAKRGLLGGYNDAGHNS-FHYRMAFSMTIL 481
           +D K GL+GGY DAG NS FH+ M+F+MT+L
Sbjct: 160 TDVKGGLVGGYYDAGDNSKFHFPMSFAMTML 190


>ref|XP_004169320.1| PREDICTED: endoglucanase 7-like [Cucumis sativus]
          Length = 627

 Score =  112 bits (280), Expect(2) = 2e-27
 Identities = 59/103 (57%), Positives = 75/103 (72%), Gaps = 12/103 (11%)
 Frame = +1

Query: 112 LYETQQSWLLGL-QVKKKKNYVDFGCIVGSYKALQWTIVAILIAFLVIGLPVILSK---- 276
           L ETQ+SWLLG    KKKK YVD GC++ S KAL+W++++ILIAF VIGLP+I++K    
Sbjct: 48  LDETQRSWLLGPPDGKKKKKYVDLGCVMVSRKALKWSLISILIAFCVIGLPIIVAKTWPR 107

Query: 277 -------EDDYSKALRSALLFFNAEKSGPLPKDNNVSWRGDIG 384
                   D YS+ALR ALLFFNA+KSG L K NN++WRG+ G
Sbjct: 108 HHPPPLPPDRYSEALRKALLFFNAQKSGRLGKSNNITWRGNSG 150



 Score = 36.2 bits (82), Expect(2) = 2e-27
 Identities = 17/29 (58%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
 Frame = +2

Query: 398 AKRGLLGGYNDAGHNS-FHYRMAFSMTIL 481
           AK GL+GGY D+G NS +++ MA+SMT+L
Sbjct: 159 AKGGLVGGYYDSGENSKYNFPMAYSMTML 187


>ref|XP_004152840.1| PREDICTED: endoglucanase 7-like [Cucumis sativus]
          Length = 627

 Score =  112 bits (280), Expect(2) = 2e-27
 Identities = 59/103 (57%), Positives = 75/103 (72%), Gaps = 12/103 (11%)
 Frame = +1

Query: 112 LYETQQSWLLGL-QVKKKKNYVDFGCIVGSYKALQWTIVAILIAFLVIGLPVILSK---- 276
           L ETQ+SWLLG    KKKK YVD GC++ S KAL+W++++ILIAF VIGLP+I++K    
Sbjct: 48  LDETQRSWLLGPPDGKKKKKYVDLGCVMVSRKALKWSLISILIAFCVIGLPIIVAKTWPR 107

Query: 277 -------EDDYSKALRSALLFFNAEKSGPLPKDNNVSWRGDIG 384
                   D YS+ALR ALLFFNA+KSG L K NN++WRG+ G
Sbjct: 108 HHPPPLPPDRYSEALRKALLFFNAQKSGRLGKSNNITWRGNSG 150



 Score = 36.2 bits (82), Expect(2) = 2e-27
 Identities = 17/29 (58%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
 Frame = +2

Query: 398 AKRGLLGGYNDAGHNS-FHYRMAFSMTIL 481
           AK GL+GGY D+G NS +++ MA+SMT+L
Sbjct: 159 AKGGLVGGYYDSGENSKYNFPMAYSMTML 187


>ref|XP_002312211.1| predicted protein [Populus trichocarpa] gi|222852031|gb|EEE89578.1|
           predicted protein [Populus trichocarpa]
           gi|347466549|gb|AEO97187.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466603|gb|AEO97214.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
          Length = 620

 Score =  107 bits (266), Expect(2) = 1e-26
 Identities = 56/102 (54%), Positives = 68/102 (66%), Gaps = 11/102 (10%)
 Frame = +1

Query: 112 LYETQQSWLLGLQVKKKKNYVDFGCIVGSYKALQWTIVAILIAFLVIGLPVILSK----- 276
           L ETQQSWLL  Q  KKK +VD GC+  S+KAL+WT+ A + A LVI LP+IL K     
Sbjct: 43  LDETQQSWLLYPQETKKKKHVDLGCVACSHKALKWTLYAFVFALLVIALPIILVKTLPKH 102

Query: 277 ------EDDYSKALRSALLFFNAEKSGPLPKDNNVSWRGDIG 384
                  D+Y+ ALR ALLFFNA+KSG L K+N + WRGD G
Sbjct: 103 NSKPPPPDNYTLALRKALLFFNAQKSGKLHKNNGIPWRGDSG 144



 Score = 38.9 bits (89), Expect(2) = 1e-26
 Identities = 18/29 (62%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
 Frame = +2

Query: 398 AKRGLLGGYNDAGHNS-FHYRMAFSMTIL 481
           +K GL+GGY DAG N+ FH+ MAF+MT+L
Sbjct: 154 SKAGLVGGYYDAGDNTKFHFPMAFAMTML 182


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