BLASTX nr result

ID: Coptis23_contig00019640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019640
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519856.1| Transmembrane protein 45a, putative [Ricinus...   413   e-113
ref|XP_002263042.2| PREDICTED: LOW QUALITY PROTEIN: transmembran...   404   e-110
ref|XP_002303462.1| predicted protein [Populus trichocarpa] gi|2...   402   e-109
emb|CAN68559.1| hypothetical protein VITISV_028486 [Vitis vinifera]   401   e-109
ref|XP_002326579.1| predicted protein [Populus trichocarpa] gi|2...   394   e-107

>ref|XP_002519856.1| Transmembrane protein 45a, putative [Ricinus communis]
           gi|223540902|gb|EEF42460.1| Transmembrane protein 45a,
           putative [Ricinus communis]
          Length = 278

 Score =  413 bits (1062), Expect = e-113
 Identities = 190/277 (68%), Positives = 228/277 (82%)
 Frame = +2

Query: 68  MGSFKGHVVPGSLFLIIGVWHMWSSVVRYVSNPKSFRVRAWNPVPGFDGKFMYMELYVVA 247
           MGSFKGH +PGSLFL++G+WH+W S+VRYVSNPK+FRVR WNPVPGFDGK  Y+ELY+VA
Sbjct: 1   MGSFKGHALPGSLFLLVGMWHIWCSLVRYVSNPKAFRVRVWNPVPGFDGKLKYLELYLVA 60

Query: 248 IGSFIDLCIELLYSTHLRFFVNGVLNPTHMNNFEHSGMLLMFFIFGVVALLSQKTRYLPL 427
           +G+FIDLCIELLYSTHL+FFV+GVLNP+HMN+FEHSGMLLMFFIFGVV+LLS+KTR+LPL
Sbjct: 61  VGAFIDLCIELLYSTHLKFFVDGVLNPSHMNDFEHSGMLLMFFIFGVVSLLSEKTRFLPL 120

Query: 428 PEGALCLIVASAFCAEYLLFYFHSTTHKGLEGYYHXXXXXXXXXXXXSSVTGALFPTSFP 607
           PEGALCL+ A+AFCAEYLLFYFHSTTHKGLEGYYH            S+V G L PTSFP
Sbjct: 121 PEGALCLVAATAFCAEYLLFYFHSTTHKGLEGYYHLLLVLLIALCILSTVAGTLLPTSFP 180

Query: 608 LDLSCGISITLQGLWFYQTAFTLYGPMMPDGCHLKEDMISCQSNDSEVRGELFANLQXXX 787
           +DLS GI+ITLQGLWFYQTAF+LYGPM+PDGC LK D ++C+S  S+VRGEL AN Q   
Sbjct: 181 IDLSSGIAITLQGLWFYQTAFSLYGPMVPDGCQLKNDQVTCRSMASQVRGELLANFQLFA 240

Query: 788 XXXXXXXXXXXSYIFASSRFGHSDLRALQTSENGVNR 898
                      SY FA+S++G SDL++L    +G+++
Sbjct: 241 LVLGVLVGVVVSYGFAASKYGRSDLQSLHVVPDGLDK 277


>ref|XP_002263042.2| PREDICTED: LOW QUALITY PROTEIN: transmembrane protein 45B-like
           [Vitis vinifera]
          Length = 278

 Score =  404 bits (1039), Expect = e-110
 Identities = 191/277 (68%), Positives = 223/277 (80%)
 Frame = +2

Query: 68  MGSFKGHVVPGSLFLIIGVWHMWSSVVRYVSNPKSFRVRAWNPVPGFDGKFMYMELYVVA 247
           MGSF GHV+PG+LFL +G+WH+WS+VVR+V NPK F+VR WNPV GFDG+  Y+ELYVVA
Sbjct: 1   MGSFMGHVLPGTLFLAVGLWHIWSAVVRFVMNPKGFQVRVWNPVSGFDGRLRYLELYVVA 60

Query: 248 IGSFIDLCIELLYSTHLRFFVNGVLNPTHMNNFEHSGMLLMFFIFGVVALLSQKTRYLPL 427
           IG+FID+CIELLYSTHL+FFVNGVLNP+HMN+FEHSGMLLMFFIFGVVALLSQ+T  +PL
Sbjct: 61  IGAFIDMCIELLYSTHLQFFVNGVLNPSHMNDFEHSGMLLMFFIFGVVALLSQQTGLVPL 120

Query: 428 PEGALCLIVASAFCAEYLLFYFHSTTHKGLEGYYHXXXXXXXXXXXXSSVTGALFPTSFP 607
           PEGALCLI A+AF AEY LFYFHSTTHKGLEGYYH            S++ GAL PTSFP
Sbjct: 121 PEGALCLIAATAFSAEYFLFYFHSTTHKGLEGYYHLLLVILIGLCILSTIFGALMPTSFP 180

Query: 608 LDLSCGISITLQGLWFYQTAFTLYGPMMPDGCHLKEDMISCQSNDSEVRGELFANLQXXX 787
           +DL CGI+I LQGLWFYQTAFTLYGPMMP+GC LKE+MISC S + +VRGEL AN Q   
Sbjct: 181 VDLCCGIAIALQGLWFYQTAFTLYGPMMPEGCRLKENMISCHSPEYQVRGELLANFQLFI 240

Query: 788 XXXXXXXXXXXSYIFASSRFGHSDLRALQTSENGVNR 898
                      SY FA+SRFGH DLR+L  +E+ ++R
Sbjct: 241 IAFGVLVAVVGSYGFAASRFGHPDLRSLCAAEDELDR 277


>ref|XP_002303462.1| predicted protein [Populus trichocarpa] gi|222840894|gb|EEE78441.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  402 bits (1032), Expect = e-109
 Identities = 190/275 (69%), Positives = 221/275 (80%)
 Frame = +2

Query: 68  MGSFKGHVVPGSLFLIIGVWHMWSSVVRYVSNPKSFRVRAWNPVPGFDGKFMYMELYVVA 247
           MGSF GH +PG+LFL++GVWH+WSS+VRYVSNPKSFRVR WNPVPGFDGK  Y+ELY+VA
Sbjct: 1   MGSFIGHALPGTLFLLVGVWHIWSSLVRYVSNPKSFRVRVWNPVPGFDGKLEYLELYLVA 60

Query: 248 IGSFIDLCIELLYSTHLRFFVNGVLNPTHMNNFEHSGMLLMFFIFGVVALLSQKTRYLPL 427
            G+FID+CIE+LYSTHL+FF+NGVLNP HMN+FEH GMLLMFFIFGVV+LLS+KTR+LPL
Sbjct: 61  GGAFIDMCIEVLYSTHLKFFINGVLNPHHMNDFEHGGMLLMFFIFGVVSLLSEKTRFLPL 120

Query: 428 PEGALCLIVASAFCAEYLLFYFHSTTHKGLEGYYHXXXXXXXXXXXXSSVTGALFPTSFP 607
           PEGALCL+ A+AF AEYLLFYFHSTTHKGLEG+YH            S   GAL  TSFP
Sbjct: 121 PEGALCLVAAAAFSAEYLLFYFHSTTHKGLEGHYHLLLVLLIGLCVLSVAAGALLRTSFP 180

Query: 608 LDLSCGISITLQGLWFYQTAFTLYGPMMPDGCHLKEDMISCQSNDSEVRGELFANLQXXX 787
           +DLS GI+ITLQGLWFYQTAFTLYGPMMP+GC LK D I C+S+DS VRGEL AN Q   
Sbjct: 181 VDLSSGIAITLQGLWFYQTAFTLYGPMMPNGCQLKGDQIVCRSSDSLVRGELLANFQLFS 240

Query: 788 XXXXXXXXXXXSYIFASSRFGHSDLRALQTSENGV 892
                      SY FA+SR+GHSDL++L    +G+
Sbjct: 241 LVFGVLVTVAASYGFAASRYGHSDLKSLHVLPDGL 275


>emb|CAN68559.1| hypothetical protein VITISV_028486 [Vitis vinifera]
          Length = 301

 Score =  401 bits (1031), Expect = e-109
 Identities = 189/275 (68%), Positives = 220/275 (80%)
 Frame = +2

Query: 68  MGSFKGHVVPGSLFLIIGVWHMWSSVVRYVSNPKSFRVRAWNPVPGFDGKFMYMELYVVA 247
           MGSF GHV+PG+LFL +G+WH+WS+VVR+V NPK F+VR WNPV GFDG+  Y+ELYVVA
Sbjct: 1   MGSFMGHVLPGTLFLAVGLWHIWSAVVRFVMNPKGFQVRVWNPVSGFDGRLRYLELYVVA 60

Query: 248 IGSFIDLCIELLYSTHLRFFVNGVLNPTHMNNFEHSGMLLMFFIFGVVALLSQKTRYLPL 427
           IG+FID+CIELLYSTHL+FFVNGVLNP+HMN+FEHSGMLLMFFIFGVVALLSQ+T  +PL
Sbjct: 61  IGAFIDMCIELLYSTHLQFFVNGVLNPSHMNDFEHSGMLLMFFIFGVVALLSQQTGLVPL 120

Query: 428 PEGALCLIVASAFCAEYLLFYFHSTTHKGLEGYYHXXXXXXXXXXXXSSVTGALFPTSFP 607
           PEGALCLI A+AF AEY LFYFHSTTHKGLEGYYH            S++ GAL PTSFP
Sbjct: 121 PEGALCLIAATAFSAEYFLFYFHSTTHKGLEGYYHLLLVILIGLCILSTIFGALMPTSFP 180

Query: 608 LDLSCGISITLQGLWFYQTAFTLYGPMMPDGCHLKEDMISCQSNDSEVRGELFANLQXXX 787
           +DL CGI+I LQGLWFYQTAFTLYGPMMP+GC LKE+MISC S + +VRGEL AN Q   
Sbjct: 181 VDLCCGIAIALQGLWFYQTAFTLYGPMMPEGCRLKENMISCHSPEYQVRGELLANFQLFI 240

Query: 788 XXXXXXXXXXXSYIFASSRFGHSDLRALQTSENGV 892
                      SY FA+SRFGH DLR+L  + + +
Sbjct: 241 IAFGVLVAVVGSYGFAASRFGHPDLRSLSWANHQI 275


>ref|XP_002326579.1| predicted protein [Populus trichocarpa] gi|222833901|gb|EEE72378.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  394 bits (1013), Expect = e-107
 Identities = 183/265 (69%), Positives = 214/265 (80%)
 Frame = +2

Query: 68  MGSFKGHVVPGSLFLIIGVWHMWSSVVRYVSNPKSFRVRAWNPVPGFDGKFMYMELYVVA 247
           MGSFKGH +PG+LFL++GVWH+WSS+VRY+SNPKSFRVR WNPVPGFDGK  Y+ELY+VA
Sbjct: 1   MGSFKGHALPGTLFLLVGVWHIWSSLVRYLSNPKSFRVRVWNPVPGFDGKLKYLELYLVA 60

Query: 248 IGSFIDLCIELLYSTHLRFFVNGVLNPTHMNNFEHSGMLLMFFIFGVVALLSQKTRYLPL 427
            G+FID+CIELLYSTHL+FFVNGVLNP HMN+FEH GMLLMFFIFG V LLS+KT +LPL
Sbjct: 61  GGAFIDMCIELLYSTHLKFFVNGVLNPHHMNDFEHGGMLLMFFIFGAVGLLSEKTSFLPL 120

Query: 428 PEGALCLIVASAFCAEYLLFYFHSTTHKGLEGYYHXXXXXXXXXXXXSSVTGALFPTSFP 607
           PEG LCL+ A+AF AEYLLFYFHSTTHKGLEG+YH            S VTGAL PT+FP
Sbjct: 121 PEGVLCLVAAAAFSAEYLLFYFHSTTHKGLEGHYHLLLVLLIGLCVLSIVTGALLPTNFP 180

Query: 608 LDLSCGISITLQGLWFYQTAFTLYGPMMPDGCHLKEDMISCQSNDSEVRGELFANLQXXX 787
           +DLS GI++TLQGLWFYQTAF LYGPMMPDGC LK + I C+S++S++RGEL A  Q   
Sbjct: 181 VDLSSGIAMTLQGLWFYQTAFCLYGPMMPDGCQLKGNQIMCRSSESQIRGELLATFQLFS 240

Query: 788 XXXXXXXXXXXSYIFASSRFGHSDL 862
                      +Y FA+SR+GHSDL
Sbjct: 241 MVFGVLVAVAAAYGFAASRYGHSDL 265


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