BLASTX nr result

ID: Coptis23_contig00019628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019628
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303094.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-15
ref|XP_002521154.1| conserved hypothetical protein [Ricinus comm...    60   3e-15
ref|XP_003554315.1| PREDICTED: uncharacterized protein LOC100820...    55   3e-14
ref|XP_003521327.1| PREDICTED: uncharacterized protein LOC100796...    54   7e-14
ref|XP_003625469.1| CLIP-associating protein [Medicago truncatul...    56   2e-13

>ref|XP_002303094.1| predicted protein [Populus trichocarpa] gi|222844820|gb|EEE82367.1|
            predicted protein [Populus trichocarpa]
          Length = 1426

 Score = 60.1 bits (144), Expect(2) = 1e-15
 Identities = 29/38 (76%), Positives = 35/38 (92%)
 Frame = +3

Query: 135  KSFLRYLEGLNSTQLQLVSIYANRISQARSDTAIDPNH 248
            K+FL +LEGLNSTQL+LV+IYANRISQAR+ TAID +H
Sbjct: 1388 KAFLPHLEGLNSTQLRLVTIYANRISQARTGTAIDASH 1425



 Score = 47.8 bits (112), Expect(2) = 1e-15
 Identities = 31/61 (50%), Positives = 33/61 (54%), Gaps = 24/61 (39%)
 Frame = +1

Query: 19   QVSNEAERCLTVVLCQYDPFRCLI-----------------------LVGRLSQ-ELMVQ 126
            +VSNEAE CLTV L QYDPFRCL                        LVGRLSQ ELMVQ
Sbjct: 1293 KVSNEAEHCLTVALSQYDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMVQ 1352

Query: 127  M 129
            +
Sbjct: 1353 L 1353


>ref|XP_002521154.1| conserved hypothetical protein [Ricinus communis]
            gi|223539723|gb|EEF41305.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1384

 Score = 60.5 bits (145), Expect(2) = 3e-15
 Identities = 29/38 (76%), Positives = 35/38 (92%)
 Frame = +3

Query: 135  KSFLRYLEGLNSTQLQLVSIYANRISQARSDTAIDPNH 248
            K+FL YLEGLNSTQL+LV+IYANRISQAR+ TAI+ +H
Sbjct: 1346 KAFLPYLEGLNSTQLRLVTIYANRISQARTGTAIEASH 1383



 Score = 45.8 bits (107), Expect(2) = 3e-15
 Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 24/61 (39%)
 Frame = +1

Query: 19   QVSNEAERCLTVVLCQYDPFRCLI-----------------------LVGRLSQ-ELMVQ 126
            +VSNEAE CL++VL QYDPFRCL                        LVGRLSQ ELM Q
Sbjct: 1251 KVSNEAEHCLSIVLSQYDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMTQ 1310

Query: 127  M 129
            +
Sbjct: 1311 L 1311


>ref|XP_003554315.1| PREDICTED: uncharacterized protein LOC100820523 [Glycine max]
          Length = 1444

 Score = 55.5 bits (132), Expect(2) = 3e-14
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = +3

Query: 135  KSFLRYLEGLNSTQLQLVSIYANRISQARSDTAID 239
            K+FL YL+GLNSTQL+LV+IYANRISQAR+  AID
Sbjct: 1406 KAFLPYLQGLNSTQLKLVTIYANRISQARTGKAID 1440



 Score = 47.4 bits (111), Expect(2) = 3e-14
 Identities = 30/61 (49%), Positives = 33/61 (54%), Gaps = 24/61 (39%)
 Frame = +1

Query: 19   QVSNEAERCLTVVLCQYDPFRCLI-----------------------LVGRLSQ-ELMVQ 126
            +VSNEAE CLT+VL QYDPFRCL                        LVGRLSQ ELM Q
Sbjct: 1311 KVSNEAEHCLTIVLSQYDPFRCLSVIVPLLVTEDEKTLVICINCLTKLVGRLSQEELMTQ 1370

Query: 127  M 129
            +
Sbjct: 1371 L 1371


>ref|XP_003521327.1| PREDICTED: uncharacterized protein LOC100796697 [Glycine max]
          Length = 1440

 Score = 54.3 bits (129), Expect(2) = 7e-14
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = +3

Query: 135  KSFLRYLEGLNSTQLQLVSIYANRISQARSDTAID 239
            ++FL YL+GLNSTQL+LV+IYANRISQAR+  AID
Sbjct: 1402 RAFLPYLQGLNSTQLKLVTIYANRISQARTGKAID 1436



 Score = 47.4 bits (111), Expect(2) = 7e-14
 Identities = 30/61 (49%), Positives = 33/61 (54%), Gaps = 24/61 (39%)
 Frame = +1

Query: 19   QVSNEAERCLTVVLCQYDPFRCLI-----------------------LVGRLSQ-ELMVQ 126
            +VSNEAE CLT+VL QYDPFRCL                        LVGRLSQ ELM Q
Sbjct: 1307 KVSNEAEHCLTIVLSQYDPFRCLSVIVPLLVTEDEKTLVICINCLTKLVGRLSQEELMAQ 1366

Query: 127  M 129
            +
Sbjct: 1367 L 1367


>ref|XP_003625469.1| CLIP-associating protein [Medicago truncatula]
            gi|355500484|gb|AES81687.1| CLIP-associating protein
            [Medicago truncatula]
          Length = 1169

 Score = 56.2 bits (134), Expect(2) = 2e-13
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = +3

Query: 135  KSFLRYLEGLNSTQLQLVSIYANRISQARSDTAIDPNH 248
            K+FL YL+GLNSTQL+LV+IYANRISQAR+  AID  H
Sbjct: 1131 KAFLPYLQGLNSTQLKLVTIYANRISQARTGKAIDIVH 1168



 Score = 43.9 bits (102), Expect(2) = 2e-13
 Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 24/61 (39%)
 Frame = +1

Query: 19   QVSNEAERCLTVVLCQYDPFRCLI-----------------------LVGRLSQ-ELMVQ 126
            +VSNEAE CLT+VL Q DPFRCL                        LVGRLSQ ELM Q
Sbjct: 1036 KVSNEAEHCLTIVLSQSDPFRCLSVIVPLLVTDDEKTLVTCINCLTKLVGRLSQEELMAQ 1095

Query: 127  M 129
            +
Sbjct: 1096 L 1096


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