BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019613
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containi...    65   8e-09
ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containi...    65   8e-09
ref|XP_002531596.1| pentatricopeptide repeat-containing protein,...    62   4e-08
ref|XP_004168986.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
ref|XP_004146650.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08

>ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 461

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/55 (58%), Positives = 41/55 (74%)
 Frame = +3

Query: 210 NLFKRISSLGDQTVSVVPLLQQWVIEEEKSVTEDELNNFIKYLKARKRFKHALEI 374
           NL++RIS +GD  +SV PLL QWV+ E + V +DEL + IK L+  KRFKHALEI
Sbjct: 30  NLYRRISPVGDPNISVTPLLDQWVL-EGRLVQQDELRHIIKELRVYKRFKHALEI 83


>ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 227

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/55 (58%), Positives = 41/55 (74%)
 Frame = +3

Query: 210 NLFKRISSLGDQTVSVVPLLQQWVIEEEKSVTEDELNNFIKYLKARKRFKHALEI 374
           NL++RIS +GD  +SV PLL QWV+ E + V +DEL + IK L+  KRFKHALEI
Sbjct: 30  NLYRRISPVGDPNISVTPLLDQWVL-EGRLVQQDELRHIIKELRVYKRFKHALEI 83


>ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528792|gb|EEF30799.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 300

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/54 (59%), Positives = 41/54 (75%)
 Frame = +3

Query: 213 LFKRISSLGDQTVSVVPLLQQWVIEEEKSVTEDELNNFIKYLKARKRFKHALEI 374
           L++RIS +GD  VS+VP+L QW IEE KSV +D+L  FIK L+  KR+ HALEI
Sbjct: 51  LYRRISPVGDPKVSIVPILDQW-IEEGKSVNKDQLQVFIKELRYCKRYTHALEI 103


>ref|XP_004168986.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 191

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/55 (54%), Positives = 40/55 (72%)
 Frame = +3

Query: 210 NLFKRISSLGDQTVSVVPLLQQWVIEEEKSVTEDELNNFIKYLKARKRFKHALEI 374
           +L++RIS +GD  +SV PLL QWV+ E   V +DEL + IK L+  KRFKHALE+
Sbjct: 30  SLYRRISPVGDPNISVTPLLDQWVL-ESGLVQQDELRHIIKELRVYKRFKHALEV 83


>ref|XP_004146650.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 222

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/55 (54%), Positives = 40/55 (72%)
 Frame = +3

Query: 210 NLFKRISSLGDQTVSVVPLLQQWVIEEEKSVTEDELNNFIKYLKARKRFKHALEI 374
           +L++RIS +GD  +SV PLL QWV+ E   V +DEL + IK L+  KRFKHALE+
Sbjct: 30  SLYRRISPVGDPNISVTPLLDQWVL-ESGLVQQDELRHIIKELRVYKRFKHALEV 83