BLASTX nr result

ID: Coptis23_contig00019607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019607
         (1315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283768.1| PREDICTED: uncharacterized protein LOC100248...   367   3e-99
ref|XP_002309487.1| predicted protein [Populus trichocarpa] gi|2...   347   3e-93
ref|XP_002514056.1| protein with unknown function [Ricinus commu...   330   4e-88
emb|CBI19281.3| unnamed protein product [Vitis vinifera]              326   9e-87
ref|XP_003526554.1| PREDICTED: uncharacterized protein LOC100783...   315   1e-83

>ref|XP_002283768.1| PREDICTED: uncharacterized protein LOC100248920 [Vitis vinifera]
          Length = 704

 Score =  367 bits (943), Expect = 3e-99
 Identities = 198/392 (50%), Positives = 263/392 (67%), Gaps = 4/392 (1%)
 Frame = +3

Query: 3    PLSSNNSKKAQTWVTFLKFPHTEDNSSQAYPVEVRIGHFQGIVXXXXXXXXXX-QFTFTV 179
            PL+++ S  AQ WVT L  P  + + S AYP+EV +G  QGI+           +F FTV
Sbjct: 313  PLATSKSCAAQAWVTHLNVPDVKLHPSTAYPIEVNLGDSQGIISLSGSHCSHPSRFAFTV 372

Query: 180  SLQHTKSKNAEGVVGSKMLDWSDDSLHTRHAVYLNLSLTLSLDQPRMGKDHERIATTWLI 359
             +Q   SK+AE     +M+ W D + H   A     S     D+  + KDHE  A+ W  
Sbjct: 373  CVQPLSSKHAERQ-SVEMILWRDVNFHFYDAHVQESSPIAYFDRLSIKKDHEPAASKWHA 431

Query: 360  ETINSEITVFRDFFF---CKIGKLAVARLLMAHDSIMTHSNPFEYKKVNSEEVLHLFSDL 530
            +T+ +EI + R       CKIGKL +ARLLMAHD+++++  P  +KKV+SEEVL L+SDL
Sbjct: 432  KTLVNEIALVRQLLSEIDCKIGKLTLARLLMAHDAMVSYMAPHSHKKVHSEEVLQLYSDL 491

Query: 531  MELDPAHYRYYKDEHSLVLMEKVISDRKASQNHCLNSVESRSSNLCSSICLRLNNLSLSK 710
            MELDP H +YYK+  SLVL+++V S+R++   HC +   S SS++ +S+CLRLNNLSLS+
Sbjct: 492  MELDPMHSQYYKEAQSLVLLQQVTSNRESLLKHCCHHRVSTSSSVGNSVCLRLNNLSLSR 551

Query: 711  IGAFQHLLWVQMLDLSHNELQSIEGLEAMQLLCCLNLSYNRFRSFTALEPLKLLQSLKVL 890
            IG  + LLWVQMLDLSHNEL+SI+GLEAMQLL  LNLS+N+  SFTALEPL+LL+ LKVL
Sbjct: 552  IGCVEQLLWVQMLDLSHNELRSIDGLEAMQLLSFLNLSHNKLSSFTALEPLRLLKLLKVL 611

Query: 891  NISYNDIGVHPVDTTRYLCSSPLSHTVANDHSFDDFAITLIKVAESWEAVLFFKGLHLRQ 1070
            +ISYN+IG HPVDT RYLCSSPLSHTV +D +F++F     KV   WEA   F+G +L Q
Sbjct: 612  DISYNEIGAHPVDTRRYLCSSPLSHTVGSDWNFNEFVPDDAKVTNYWEAFAIFRGFNLTQ 671

Query: 1071 LDIVGNAVSDDNFRSXXXXXXXXXXXXDGKQL 1166
            LDIVGNA++D+ F+S            DG++L
Sbjct: 672  LDIVGNAITDEKFKSFLIKVLPTLKWVDGEEL 703


>ref|XP_002309487.1| predicted protein [Populus trichocarpa] gi|222855463|gb|EEE93010.1|
            predicted protein [Populus trichocarpa]
          Length = 696

 Score =  347 bits (891), Expect = 3e-93
 Identities = 186/389 (47%), Positives = 252/389 (64%), Gaps = 1/389 (0%)
 Frame = +3

Query: 3    PLSSNNSKKAQTWVTFLKFPHTEDNSSQAYPVEVRIGHFQGIVXXXXXXXXXXQ-FTFTV 179
            P+ SNNS+  Q WV  LKFP  E +S  AY +EV +GH QGI+            F+FTV
Sbjct: 313  PILSNNSRTTQVWVGQLKFPEVELDSLGAYTMEVTLGHSQGIISSSGFHYSHPSHFSFTV 372

Query: 180  SLQHTKSKNAEGVVGSKMLDWSDDSLHTRHAVYLNLSLTLSLDQPRMGKDHERIATTWLI 359
             +   K++  EG+ GS+ + W D++ H   +  L  +  L LD   +  + E   ++W  
Sbjct: 373  HVLPAKTEPVEGL-GSEKISWRDENFHIYESDSLESNSVLPLDHLSIKNEREPTHSSWQA 431

Query: 360  ETINSEITVFRDFFFCKIGKLAVARLLMAHDSIMTHSNPFEYKKVNSEEVLHLFSDLMEL 539
            + I+ EI+ FR+   CKIGKL +ARLL A D++M+   P     V+SEEVL L+S+LM+L
Sbjct: 432  KIIDEEISNFRELLDCKIGKLTLARLLTARDALMSSDKP-----VHSEEVLRLYSELMKL 486

Query: 540  DPAHYRYYKDEHSLVLMEKVISDRKASQNHCLNSVESRSSNLCSSICLRLNNLSLSKIGA 719
            DP H R+YKDEHSLVL+EKVIS R++  ++C       SS+  + ICLRLN LSLS++G+
Sbjct: 487  DPPHSRFYKDEHSLVLLEKVISGRESLLSYCFRYRNLTSSSSSNPICLRLNGLSLSRLGS 546

Query: 720  FQHLLWVQMLDLSHNELQSIEGLEAMQLLCCLNLSYNRFRSFTALEPLKLLQSLKVLNIS 899
            F+ LLWVQMLDLSHNELQSIEGLEAMQLL  LNLS N+F SFT+LEPL+ L+S+KVL++S
Sbjct: 547  FEKLLWVQMLDLSHNELQSIEGLEAMQLLSHLNLSKNKFGSFTSLEPLRHLKSMKVLDLS 606

Query: 900  YNDIGVHPVDTTRYLCSSPLSHTVANDHSFDDFAITLIKVAESWEAVLFFKGLHLRQLDI 1079
            YN+IG H +DTTRYLCSSPL H+V ++    +     + +   WEA    +GL L Q+DI
Sbjct: 607  YNEIGSHSIDTTRYLCSSPLCHSVGSEWDGSETVTDGVSLVSYWEAFFILRGLKLTQIDI 666

Query: 1080 VGNAVSDDNFRSXXXXXXXXXXXXDGKQL 1166
             GNA++D+ F +            DG QL
Sbjct: 667  AGNAIADEKFTAFLAKVLPALKWLDGVQL 695


>ref|XP_002514056.1| protein with unknown function [Ricinus communis]
            gi|223547142|gb|EEF48639.1| protein with unknown function
            [Ricinus communis]
          Length = 696

 Score =  330 bits (847), Expect = 4e-88
 Identities = 184/389 (47%), Positives = 246/389 (63%), Gaps = 1/389 (0%)
 Frame = +3

Query: 3    PLSSNNSKKAQTWVTFLKFPHTEDNSSQAYPVEVRIGHFQGIVXXXXXXXXXXQ-FTFTV 179
            P+S++ S+ AQ WVT L FP    +S ++YPVEV  G +QGIV              FTV
Sbjct: 313  PVSTHISQAAQVWVTELSFPDVNLHSLESYPVEVSFGQYQGIVSSTGSYYSHPSHLAFTV 372

Query: 180  SLQHTKSKNAEGVVGSKMLDWSDDSLHTRHAVYLNLSLTLSLDQPRMGKDHERIATTWLI 359
             +Q  K+  AEG   ++ + W+D++ H      L   L  SLD   +   +E  A TW  
Sbjct: 373  RVQSVKTGLAEGASVAR-ISWTDNNFHLCEPHLLESDLVASLDNLSIKSKNEPAAATWQE 431

Query: 360  ETINSEITVFRDFFFCKIGKLAVARLLMAHDSIMTHSNPFEYKKVNSEEVLHLFSDLMEL 539
            + I  EI +FR+   CKIGKL +ARLL AHD++++       K  +SEEVL L+  L++L
Sbjct: 432  KIIAEEIKLFRELSDCKIGKLTLARLLSAHDALVSSD-----KSAHSEEVLRLYCQLIKL 486

Query: 540  DPAHYRYYKDEHSLVLMEKVISDRKASQNHCLNSVESRSSNLCSSICLRLNNLSLSKIGA 719
            DP H RYYKD HSL L+++V S +++  + C +  +  S +    ICLRLNNLSLS+IGA
Sbjct: 487  DPTHARYYKDVHSLALLQQVTSSQESVLSRCFHYRDVTSLSSGYPICLRLNNLSLSRIGA 546

Query: 720  FQHLLWVQMLDLSHNELQSIEGLEAMQLLCCLNLSYNRFRSFTALEPLKLLQSLKVLNIS 899
             + LLWVQMLDLS NELQSIEGLEAMQLL  L+LS N+  SFT+LEPL+ L+SLK+L+IS
Sbjct: 547  VEKLLWVQMLDLSCNELQSIEGLEAMQLLSYLSLSRNKLSSFTSLEPLRQLKSLKMLDIS 606

Query: 900  YNDIGVHPVDTTRYLCSSPLSHTVANDHSFDDFAITLIKVAESWEAVLFFKGLHLRQLDI 1079
            YN+IG+H +DTTRYLCSSPLSH+V N+   D   I  I +   WEA    KGL+L QLD+
Sbjct: 607  YNEIGLHSIDTTRYLCSSPLSHSVGNEWEQDKTVIYGIDMTNYWEAFFVLKGLNLTQLDV 666

Query: 1080 VGNAVSDDNFRSXXXXXXXXXXXXDGKQL 1166
            +GNA++D+ F S            DG +L
Sbjct: 667  LGNAIADEKFTSFLVKVLPKLKWLDGVKL 695


>emb|CBI19281.3| unnamed protein product [Vitis vinifera]
          Length = 316

 Score =  326 bits (835), Expect = 9e-87
 Identities = 169/315 (53%), Positives = 222/315 (70%), Gaps = 3/315 (0%)
 Frame = +3

Query: 231  MLDWSDDSLHTRHAVYLNLSLTLSLDQPRMGKDHERIATTWLIETINSEITVFRDFFF-- 404
            M+ W D + H   A     S     D+  + KDHE  A+ W  +T+ +EI + R      
Sbjct: 1    MILWRDVNFHFYDAHVQESSPIAYFDRLSIKKDHEPAASKWHAKTLVNEIALVRQLLSEI 60

Query: 405  -CKIGKLAVARLLMAHDSIMTHSNPFEYKKVNSEEVLHLFSDLMELDPAHYRYYKDEHSL 581
             CKIGKL +ARLLMAHD+++++  P  +KKV+SEEVL L+SDLMELDP H +YYK+  SL
Sbjct: 61   DCKIGKLTLARLLMAHDAMVSYMAPHSHKKVHSEEVLQLYSDLMELDPMHSQYYKEAQSL 120

Query: 582  VLMEKVISDRKASQNHCLNSVESRSSNLCSSICLRLNNLSLSKIGAFQHLLWVQMLDLSH 761
            VL+++V S+R++   HC +   S SS++ +S+CLRLNNLSLS+IG  + LLWVQMLDLSH
Sbjct: 121  VLLQQVTSNRESLLKHCCHHRVSTSSSVGNSVCLRLNNLSLSRIGCVEQLLWVQMLDLSH 180

Query: 762  NELQSIEGLEAMQLLCCLNLSYNRFRSFTALEPLKLLQSLKVLNISYNDIGVHPVDTTRY 941
            NEL+SI+GLEAMQLL  LNLS+N+  SFTALEPL+LL+ LKVL+ISYN+IG HPVDT RY
Sbjct: 181  NELRSIDGLEAMQLLSFLNLSHNKLSSFTALEPLRLLKLLKVLDISYNEIGAHPVDTRRY 240

Query: 942  LCSSPLSHTVANDHSFDDFAITLIKVAESWEAVLFFKGLHLRQLDIVGNAVSDDNFRSXX 1121
            LCSSPLSHTV +D +F++F     KV   WEA   F+G +L QLDIVGNA++D+ F+S  
Sbjct: 241  LCSSPLSHTVGSDWNFNEFVPDDAKVTNYWEAFAIFRGFNLTQLDIVGNAITDEKFKSFL 300

Query: 1122 XXXXXXXXXXDGKQL 1166
                      DG++L
Sbjct: 301  IKVLPTLKWVDGEEL 315


>ref|XP_003526554.1| PREDICTED: uncharacterized protein LOC100783193 [Glycine max]
          Length = 691

 Score =  315 bits (808), Expect = 1e-83
 Identities = 181/377 (48%), Positives = 240/377 (63%), Gaps = 6/377 (1%)
 Frame = +3

Query: 3    PLSSNNSKKAQTWVTFLKFPHTEDNSSQAYPVEVRIGHFQGIVXXXXXXXXXX-QFTFTV 179
            PLS NNS  AQ WV +L   + E   S+ Y VE+ IGH +GI+           Q +  V
Sbjct: 309  PLSMNNSNTAQFWVVYLNLGNFELQPSKTYSVEINIGHSKGIISSNGNHFDDPSQISCKV 368

Query: 180  SLQHTKSKNAEGVVGSKMLDWSDDSLHTRHAVYLNLSLTLSLDQPRMGKDHERIATTWLI 359
             +Q   S+  EG  G K   W D +         + S+ L  DQ      H    + W  
Sbjct: 369  FVQTASSEPTEGQ-GGKRTTWKDTNFQKIDHFQESDSI-LPADQ----NHHIPTTSNWCT 422

Query: 360  ETINSEITVFRDF---FFCKIGKLAVARLLMAHDSIMTHSNPFEYKKVNSEEVLHLFSDL 530
            E I  EIT  RD    + CKIGKL +ARLL A DS+   S  ++ +K N+EEVL L++DL
Sbjct: 423  EEIGEEITKVRDLLSEYDCKIGKLTLARLLSALDSL---SFQYDGRKSNTEEVLQLYTDL 479

Query: 531  MELDPAHYRYYKDEHSLVLMEKVISDRKASQNHCLNSVESRSSNLCSSICLRLNNLSLSK 710
            M+LDP HY YYKDEHSL+ ++++ S R +   +C +  +  +  +   +CLRL NLSLS+
Sbjct: 480  MKLDPTHYLYYKDEHSLISLKRITSTRDSLLPYC-HYYKDATETITGYVCLRLRNLSLSR 538

Query: 711  IGAFQHLLWVQMLDLSHNELQSIEGLEAMQLLCCLNLSYNRFRSFTALEPLKLLQSLKVL 890
            +G+ ++LLWVQMLDLSHNELQS+EGLEAMQLL CLNLS+N+F SFTALEP++LL+SLKVL
Sbjct: 539  MGSIENLLWVQMLDLSHNELQSVEGLEAMQLLSCLNLSHNKFGSFTALEPVRLLKSLKVL 598

Query: 891  NISYNDIGVHPVDTTRYLCSSPLSHTVANDHSFDDFAITL--IKVAESWEAVLFFKGLHL 1064
            NISYN++G H +DTTRYLCSSP+SH  A + ++D F +    I   + WEA L F  L L
Sbjct: 599  NISYNELGSHSIDTTRYLCSSPVSH--AEEFAWDRFELLTDSINATKFWEAFLIFGSLTL 656

Query: 1065 RQLDIVGNAVSDDNFRS 1115
             +L+I GNAV+D+NFRS
Sbjct: 657  TELNITGNAVADENFRS 673


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