BLASTX nr result

ID: Coptis23_contig00019598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019598
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513447.1| conserved hypothetical protein [Ricinus comm...   236   4e-60
ref|XP_002303872.1| predicted protein [Populus trichocarpa] gi|2...   215   7e-54
ref|XP_003597478.1| Bifunctional protein aas [Medicago truncatul...   214   1e-53
emb|CBI16432.3| unnamed protein product [Vitis vinifera]              209   5e-52
ref|XP_002283091.1| PREDICTED: uncharacterized protein LOC100253...   209   5e-52

>ref|XP_002513447.1| conserved hypothetical protein [Ricinus communis]
            gi|223547355|gb|EEF48850.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2278

 Score =  236 bits (601), Expect = 4e-60
 Identities = 112/139 (80%), Positives = 124/139 (89%)
 Frame = +2

Query: 128  TAILFSPLTFIKNPLLWLQTMSAYRATNNAGPNFTFELAVRRLESYREKTPSYDLSSMKF 307
            +AILFSPLTFIKNPLLWLQTMS YRAT++AGPNF FEL +RRLES REK  +YDLSSM F
Sbjct: 706  SAILFSPLTFIKNPLLWLQTMSKYRATHSAGPNFAFELVIRRLESDREKVRNYDLSSMVF 765

Query: 308  LMIAAEPVRQKTLKRFLELTRPFLFSQEVMAPGYGLAENCVYVSCAFGEGNPILVDWQGR 487
            LM+AAEPVRQKTLKRF+ELTRPF   QEVMAPGYGLAENCV+VSCAFGEG PIL+DWQGR
Sbjct: 766  LMVAAEPVRQKTLKRFIELTRPFGLYQEVMAPGYGLAENCVFVSCAFGEGKPILIDWQGR 825

Query: 488  ICCGHTTRSDLDVDIRIVD 544
            +CCG+   +D DVDIRIVD
Sbjct: 826  VCCGYANPADADVDIRIVD 844


>ref|XP_002303872.1| predicted protein [Populus trichocarpa] gi|222841304|gb|EEE78851.1|
            predicted protein [Populus trichocarpa]
          Length = 1078

 Score =  215 bits (547), Expect = 7e-54
 Identities = 102/140 (72%), Positives = 122/140 (87%), Gaps = 1/140 (0%)
 Frame = +2

Query: 128  TAILFSPLTFIKNPLLWLQTMSAYRATNNAGPNFTFELAVRRLE-SYREKTPSYDLSSMK 304
            +AILFSP+TFIKNPLLWLQ MS Y AT++AGPNF FEL +RRLE + ++K  ++DLSS+ 
Sbjct: 739  SAILFSPMTFIKNPLLWLQIMSKYNATHSAGPNFAFELLIRRLEYADKDKVRNFDLSSLI 798

Query: 305  FLMIAAEPVRQKTLKRFLELTRPFLFSQEVMAPGYGLAENCVYVSCAFGEGNPILVDWQG 484
            FLM+AAEPVRQ+TLKRF+ELTRPF  SQEVMAPGYGLAENCV+VSCA+GEG PILVDWQG
Sbjct: 799  FLMVAAEPVRQRTLKRFVELTRPFGLSQEVMAPGYGLAENCVFVSCAYGEGKPILVDWQG 858

Query: 485  RICCGHTTRSDLDVDIRIVD 544
            R+CCG+   +  D+DIRIVD
Sbjct: 859  RVCCGYVEPNGEDIDIRIVD 878


>ref|XP_003597478.1| Bifunctional protein aas [Medicago truncatula]
            gi|355486526|gb|AES67729.1| Bifunctional protein aas
            [Medicago truncatula]
          Length = 2339

 Score =  214 bits (545), Expect = 1e-53
 Identities = 103/140 (73%), Positives = 120/140 (85%), Gaps = 1/140 (0%)
 Frame = +2

Query: 128  TAILFSPLTFIKNPLLWLQTMSAYRATNNAGPNFTFELAVRRLESY-REKTPSYDLSSMK 304
            TA+LFSP+TFIK PLLW++TMS Y+AT++AGPNF FEL VRRLES  ++K  + DLSSM 
Sbjct: 750  TALLFSPMTFIKKPLLWIETMSKYQATHSAGPNFAFELVVRRLESSDKDKLQNLDLSSMI 809

Query: 305  FLMIAAEPVRQKTLKRFLELTRPFLFSQEVMAPGYGLAENCVYVSCAFGEGNPILVDWQG 484
            FLM+AAEPVRQKTLKRFLELT P+  SQ+ MAPGYGLAENCV+VSCAFGEGNPI VDWQG
Sbjct: 810  FLMVAAEPVRQKTLKRFLELTGPYGLSQKAMAPGYGLAENCVFVSCAFGEGNPIFVDWQG 869

Query: 485  RICCGHTTRSDLDVDIRIVD 544
            R+CCG+    + DVDIRIVD
Sbjct: 870  RVCCGYIHPGNADVDIRIVD 889


>emb|CBI16432.3| unnamed protein product [Vitis vinifera]
          Length = 2221

 Score =  209 bits (531), Expect = 5e-52
 Identities = 96/139 (69%), Positives = 119/139 (85%)
 Frame = +2

Query: 128  TAILFSPLTFIKNPLLWLQTMSAYRATNNAGPNFTFELAVRRLESYREKTPSYDLSSMKF 307
            +A+LFSP++FIKNPLLWLQTMS ++AT++AGPNF FEL VRRLES ++   +Y+LSSM F
Sbjct: 700  SAVLFSPMSFIKNPLLWLQTMSKFQATHSAGPNFAFELVVRRLESGKDTVHNYNLSSMIF 759

Query: 308  LMIAAEPVRQKTLKRFLELTRPFLFSQEVMAPGYGLAENCVYVSCAFGEGNPILVDWQGR 487
            LM+AAEPVRQ TLKRF++LT PF   +EV+APGYGLAENCV+VSCA+GEG PILVDWQ R
Sbjct: 760  LMVAAEPVRQNTLKRFVKLTSPFGLCEEVLAPGYGLAENCVFVSCAYGEGKPILVDWQER 819

Query: 488  ICCGHTTRSDLDVDIRIVD 544
            +CCG+    + DVDIR+VD
Sbjct: 820  VCCGYVDTENADVDIRVVD 838


>ref|XP_002283091.1| PREDICTED: uncharacterized protein LOC100253550 [Vitis vinifera]
          Length = 2289

 Score =  209 bits (531), Expect = 5e-52
 Identities = 96/139 (69%), Positives = 119/139 (85%)
 Frame = +2

Query: 128  TAILFSPLTFIKNPLLWLQTMSAYRATNNAGPNFTFELAVRRLESYREKTPSYDLSSMKF 307
            +A+LFSP++FIKNPLLWLQTMS ++AT++AGPNF FEL VRRLES ++   +Y+LSSM F
Sbjct: 721  SAVLFSPMSFIKNPLLWLQTMSKFQATHSAGPNFAFELVVRRLESGKDTVHNYNLSSMIF 780

Query: 308  LMIAAEPVRQKTLKRFLELTRPFLFSQEVMAPGYGLAENCVYVSCAFGEGNPILVDWQGR 487
            LM+AAEPVRQ TLKRF++LT PF   +EV+APGYGLAENCV+VSCA+GEG PILVDWQ R
Sbjct: 781  LMVAAEPVRQNTLKRFVKLTSPFGLCEEVLAPGYGLAENCVFVSCAYGEGKPILVDWQER 840

Query: 488  ICCGHTTRSDLDVDIRIVD 544
            +CCG+    + DVDIR+VD
Sbjct: 841  VCCGYVDTENADVDIRVVD 859


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