BLASTX nr result
ID: Coptis23_contig00019597
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00019597 (339 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298863.1| predicted protein [Populus trichocarpa] gi|2... 66 5e-11 ref|XP_004150790.1| PREDICTED: cysteine synthase 2-like [Cucumis... 57 2e-08 ref|XP_002266459.1| PREDICTED: cysteine synthase 2 [Vitis vinife... 56 2e-08 emb|CAN80713.1| hypothetical protein VITISV_024163 [Vitis vinifera] 56 2e-08 ref|XP_003617806.1| Cysteine synthase [Medicago truncatula] gi|3... 55 1e-07 >ref|XP_002298863.1| predicted protein [Populus trichocarpa] gi|222846121|gb|EEE83668.1| predicted protein [Populus trichocarpa] Length = 424 Score = 66.2 bits (160), Expect(2) = 5e-11 Identities = 29/44 (65%), Positives = 38/44 (86%) Frame = -1 Query: 261 FQHKRRFPKQLSRTKEPKSGLIGAIGNTPLIRINSLSEATGCEV 130 ++ KR+ P LS+ K+P++GLI A+GNTPLIRINSLSEATGCE+ Sbjct: 28 YRSKRKTPSPLSKNKKPRNGLIHAVGNTPLIRINSLSEATGCEI 71 Score = 25.8 bits (55), Expect(2) = 5e-11 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = -3 Query: 37 QILGKAEFLNPG 2 +ILGK EFLNPG Sbjct: 70 EILGKCEFLNPG 81 >ref|XP_004150790.1| PREDICTED: cysteine synthase 2-like [Cucumis sativus] gi|449515325|ref|XP_004164700.1| PREDICTED: cysteine synthase 2-like [Cucumis sativus] Length = 430 Score = 57.4 bits (137), Expect(2) = 2e-08 Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 9/49 (18%) Frame = -1 Query: 249 RRFPKQLSRT---------KEPKSGLIGAIGNTPLIRINSLSEATGCEV 130 + PK+ SR + PK+G++GAIGNTPLIRINSLSEATGCE+ Sbjct: 29 KHHPKERSRNNTKPFSVPKRSPKNGVVGAIGNTPLIRINSLSEATGCEI 77 Score = 25.8 bits (55), Expect(2) = 2e-08 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = -3 Query: 37 QILGKAEFLNPG 2 +ILGK EFLNPG Sbjct: 76 EILGKCEFLNPG 87 >ref|XP_002266459.1| PREDICTED: cysteine synthase 2 [Vitis vinifera] gi|296089907|emb|CBI39726.3| unnamed protein product [Vitis vinifera] Length = 421 Score = 55.8 bits (133), Expect(2) = 2e-08 Identities = 28/40 (70%), Positives = 34/40 (85%) Frame = -1 Query: 249 RRFPKQLSRTKEPKSGLIGAIGNTPLIRINSLSEATGCEV 130 R+ K +S+ K+P+ GLI AIGNTPLIRINSLSEATGCE+ Sbjct: 29 RKTHKPISK-KKPRRGLIEAIGNTPLIRINSLSEATGCEI 67 Score = 27.3 bits (59), Expect(2) = 2e-08 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = -3 Query: 37 QILGKAEFLNPG 2 +ILGKAEFLNPG Sbjct: 66 EILGKAEFLNPG 77 >emb|CAN80713.1| hypothetical protein VITISV_024163 [Vitis vinifera] Length = 421 Score = 55.8 bits (133), Expect(2) = 2e-08 Identities = 28/40 (70%), Positives = 34/40 (85%) Frame = -1 Query: 249 RRFPKQLSRTKEPKSGLIGAIGNTPLIRINSLSEATGCEV 130 R+ K +S+ K+P+ GLI AIGNTPLIRINSLSEATGCE+ Sbjct: 29 RKTHKPISK-KKPRRGLIEAIGNTPLIRINSLSEATGCEI 67 Score = 27.3 bits (59), Expect(2) = 2e-08 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = -3 Query: 37 QILGKAEFLNPG 2 +ILGKAEFLNPG Sbjct: 66 EILGKAEFLNPG 77 >ref|XP_003617806.1| Cysteine synthase [Medicago truncatula] gi|355519141|gb|AET00765.1| Cysteine synthase [Medicago truncatula] Length = 452 Score = 54.7 bits (130), Expect(2) = 1e-07 Identities = 24/37 (64%), Positives = 31/37 (83%) Frame = -1 Query: 240 PKQLSRTKEPKSGLIGAIGNTPLIRINSLSEATGCEV 130 P + + K+ K+G+I AIGNTPLIRINSLS+ATGCE+ Sbjct: 35 PSKKKKKKKSKNGIIDAIGNTPLIRINSLSDATGCEI 71 Score = 25.8 bits (55), Expect(2) = 1e-07 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = -3 Query: 37 QILGKAEFLNPG 2 +ILGK EFLNPG Sbjct: 70 EILGKCEFLNPG 81