BLASTX nr result

ID: Coptis23_contig00019597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019597
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298863.1| predicted protein [Populus trichocarpa] gi|2...    66   5e-11
ref|XP_004150790.1| PREDICTED: cysteine synthase 2-like [Cucumis...    57   2e-08
ref|XP_002266459.1| PREDICTED: cysteine synthase 2 [Vitis vinife...    56   2e-08
emb|CAN80713.1| hypothetical protein VITISV_024163 [Vitis vinifera]    56   2e-08
ref|XP_003617806.1| Cysteine synthase [Medicago truncatula] gi|3...    55   1e-07

>ref|XP_002298863.1| predicted protein [Populus trichocarpa] gi|222846121|gb|EEE83668.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score = 66.2 bits (160), Expect(2) = 5e-11
 Identities = 29/44 (65%), Positives = 38/44 (86%)
 Frame = -1

Query: 261 FQHKRRFPKQLSRTKEPKSGLIGAIGNTPLIRINSLSEATGCEV 130
           ++ KR+ P  LS+ K+P++GLI A+GNTPLIRINSLSEATGCE+
Sbjct: 28  YRSKRKTPSPLSKNKKPRNGLIHAVGNTPLIRINSLSEATGCEI 71



 Score = 25.8 bits (55), Expect(2) = 5e-11
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -3

Query: 37  QILGKAEFLNPG 2
           +ILGK EFLNPG
Sbjct: 70  EILGKCEFLNPG 81


>ref|XP_004150790.1| PREDICTED: cysteine synthase 2-like [Cucumis sativus]
           gi|449515325|ref|XP_004164700.1| PREDICTED: cysteine
           synthase 2-like [Cucumis sativus]
          Length = 430

 Score = 57.4 bits (137), Expect(2) = 2e-08
 Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 9/49 (18%)
 Frame = -1

Query: 249 RRFPKQLSRT---------KEPKSGLIGAIGNTPLIRINSLSEATGCEV 130
           +  PK+ SR          + PK+G++GAIGNTPLIRINSLSEATGCE+
Sbjct: 29  KHHPKERSRNNTKPFSVPKRSPKNGVVGAIGNTPLIRINSLSEATGCEI 77



 Score = 25.8 bits (55), Expect(2) = 2e-08
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -3

Query: 37  QILGKAEFLNPG 2
           +ILGK EFLNPG
Sbjct: 76  EILGKCEFLNPG 87


>ref|XP_002266459.1| PREDICTED: cysteine synthase 2 [Vitis vinifera]
           gi|296089907|emb|CBI39726.3| unnamed protein product
           [Vitis vinifera]
          Length = 421

 Score = 55.8 bits (133), Expect(2) = 2e-08
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = -1

Query: 249 RRFPKQLSRTKEPKSGLIGAIGNTPLIRINSLSEATGCEV 130
           R+  K +S+ K+P+ GLI AIGNTPLIRINSLSEATGCE+
Sbjct: 29  RKTHKPISK-KKPRRGLIEAIGNTPLIRINSLSEATGCEI 67



 Score = 27.3 bits (59), Expect(2) = 2e-08
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -3

Query: 37  QILGKAEFLNPG 2
           +ILGKAEFLNPG
Sbjct: 66  EILGKAEFLNPG 77


>emb|CAN80713.1| hypothetical protein VITISV_024163 [Vitis vinifera]
          Length = 421

 Score = 55.8 bits (133), Expect(2) = 2e-08
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = -1

Query: 249 RRFPKQLSRTKEPKSGLIGAIGNTPLIRINSLSEATGCEV 130
           R+  K +S+ K+P+ GLI AIGNTPLIRINSLSEATGCE+
Sbjct: 29  RKTHKPISK-KKPRRGLIEAIGNTPLIRINSLSEATGCEI 67



 Score = 27.3 bits (59), Expect(2) = 2e-08
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -3

Query: 37  QILGKAEFLNPG 2
           +ILGKAEFLNPG
Sbjct: 66  EILGKAEFLNPG 77


>ref|XP_003617806.1| Cysteine synthase [Medicago truncatula] gi|355519141|gb|AET00765.1|
           Cysteine synthase [Medicago truncatula]
          Length = 452

 Score = 54.7 bits (130), Expect(2) = 1e-07
 Identities = 24/37 (64%), Positives = 31/37 (83%)
 Frame = -1

Query: 240 PKQLSRTKEPKSGLIGAIGNTPLIRINSLSEATGCEV 130
           P +  + K+ K+G+I AIGNTPLIRINSLS+ATGCE+
Sbjct: 35  PSKKKKKKKSKNGIIDAIGNTPLIRINSLSDATGCEI 71



 Score = 25.8 bits (55), Expect(2) = 1e-07
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -3

Query: 37  QILGKAEFLNPG 2
           +ILGK EFLNPG
Sbjct: 70  EILGKCEFLNPG 81


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