BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019581
         (1050 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i...   484   e-134
ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu...   483   e-134
ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 i...   476   e-132
ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|2...   472   e-131
ref|XP_004148884.1| PREDICTED: CUGBP Elav-like family member 2-l...   464   e-128

>ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis vinifera]
            gi|296086641|emb|CBI32276.3| unnamed protein product
            [Vitis vinifera]
          Length = 437

 Score =  484 bits (1246), Expect = e-134
 Identities = 239/338 (70%), Positives = 273/338 (80%), Gaps = 2/338 (0%)
 Frame = +2

Query: 41   ECVKLFVGQVPKHMSEAELVCMFKEVALVDEVNVIKDKTTRASRGCCFVICPSREEADKA 220
            + VKLFVGQVPK+M+EA+L+ MFKE ALVDEVN+IKDK TRASRGCCFVICPSR+EADKA
Sbjct: 13   DSVKLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSRQEADKA 72

Query: 221  VNACHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSDPEVSSLFSIYGTIKDL 400
            VNACHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVS+ EVSSLFS YGTIKDL
Sbjct: 73   VNACHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSSLFSKYGTIKDL 132

Query: 401  QILRGSQQTSKGCAFLKYETKEQALAALEAINGKYKMEGSSVPLVVKWADTXXXXXXXXX 580
            QILRGSQQTSKGCAFLKYETKEQALAALEAINGK+KMEGSSVPLVVKWADT         
Sbjct: 133  QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARKA 192

Query: 581  XXXXXXXXGVSNTDSTQQPSLFGALPMGYIPPFNGFSYQAPGTYGLMQYPLQPMQNQPGF 760
                     + + DS Q PSLFGALP+GY+PP+NG+ YQAPG YGLMQY + PMQ+Q  F
Sbjct: 193  QKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLMQYRMPPMQSQAAF 252

Query: 761  HNLIPPINRGSALRGVSPDLPPGIAPRNFVTMPAGSYIGSAYPSAPGIQYPMAYPGGIMS 940
            HN+IP +N+GSA+R ++PDL   +APRN+  +P+ SY+GSAYP+ PG+QYPMAY GGIMS
Sbjct: 253  HNMIPQVNQGSAMRAIAPDLARAVAPRNY-AVPSASYMGSAYPALPGLQYPMAYHGGIMS 311

Query: 941  HRPINSSRGLTPPAIXXXXXXXXXXXXXXI--QVEGPP 1048
            H+P++ S G  PPA+                 QVEGPP
Sbjct: 312  HQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGPP 349


>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
            gi|223540085|gb|EEF41662.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 436

 Score =  483 bits (1242), Expect = e-134
 Identities = 242/339 (71%), Positives = 271/339 (79%), Gaps = 3/339 (0%)
 Frame = +2

Query: 41   ECVKLFVGQVPKHMSEAELVCMFKEVALVDEVNVIKDKTTRASRGCCFVICPSREEADKA 220
            E VKLFVGQVPKHM+E +L+ MFKE ALVDEVN+IKDKTTRASRGCCFVICPSR+EADKA
Sbjct: 13   ESVKLFVGQVPKHMTEVQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKA 72

Query: 221  VNACHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSDPEVSSLFSIYGTIKDL 400
            VNACHNK+TLPGASSPLQVKYADGELERLEHKLFVGMLPKNVS+ EVS LFS YGTIKDL
Sbjct: 73   VNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSELFSTYGTIKDL 132

Query: 401  QILRGSQQTSKGCAFLKYETKEQALAALEAINGKYKMEGSSVPLVVKWADTXXXXXXXXX 580
            QILRGSQQTSKGCAFLKYETKEQALAALEAINGK+KMEGSSVPLVVKWADT         
Sbjct: 133  QILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRA 192

Query: 581  XXXXXXXXGVSNTDSTQQPSLFGALPMGYIPPFNGFSYQAPGTYGLMQYPLQPMQNQPGF 760
                     + N DS Q PSLFGALPMGY+P +NG+ YQAPGTYGLM Y L P+Q+QP F
Sbjct: 193  QKVQSQASNLPNADS-QHPSLFGALPMGYVPQYNGYGYQAPGTYGLMPYRLPPLQSQPAF 251

Query: 761  HNLIPPINRGSALR-GVSPDLPPGIAPRNFVTMPAGSYIGSAYPSAPGIQYPMAYPGGIM 937
            H++IPP+N+G+ALR GV PDL P + PRN+  +P  SY+GSAYP+ PGIQYPMAYPGG+M
Sbjct: 252  HSIIPPVNQGNALRGGVRPDLGPSMGPRNY-ALPPASYVGSAYPAVPGIQYPMAYPGGMM 310

Query: 938  SHRPINSSRGLTPPAIXXXXXXXXXXXXXXI--QVEGPP 1048
            S RP++SS G   P +                 Q+EGPP
Sbjct: 311  SPRPLSSSPGAVSPTVGSSNSATSSGVSSSSGGQLEGPP 349


>ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis vinifera]
          Length = 447

 Score =  476 bits (1225), Expect = e-132
 Identities = 239/348 (68%), Positives = 273/348 (78%), Gaps = 12/348 (3%)
 Frame = +2

Query: 41   ECVKLFVGQVPKHMSEAELVCMFKEVALVDEVNVIKDKTTRASRGCCFVICPSREEADKA 220
            + VKLFVGQVPK+M+EA+L+ MFKE ALVDEVN+IKDK TRASRGCCFVICPSR+EADKA
Sbjct: 13   DSVKLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSRQEADKA 72

Query: 221  VNACHNKRTLPGASSPLQVKYADGELERL----------EHKLFVGMLPKNVSDPEVSSL 370
            VNACHNKRTLPGASSPLQVKYADGELERL          EHKLFVGMLPKNVS+ EVSSL
Sbjct: 73   VNACHNKRTLPGASSPLQVKYADGELERLGVIFCHPCYPEHKLFVGMLPKNVSEAEVSSL 132

Query: 371  FSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKYKMEGSSVPLVVKWAD 550
            FS YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGK+KMEGSSVPLVVKWAD
Sbjct: 133  FSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 192

Query: 551  TXXXXXXXXXXXXXXXXXGVSNTDSTQQPSLFGALPMGYIPPFNGFSYQAPGTYGLMQYP 730
            T                  + + DS Q PSLFGALP+GY+PP+NG+ YQAPG YGLMQY 
Sbjct: 193  TEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLMQYR 252

Query: 731  LQPMQNQPGFHNLIPPINRGSALRGVSPDLPPGIAPRNFVTMPAGSYIGSAYPSAPGIQY 910
            + PMQ+Q  FHN+IP +N+GSA+R ++PDL   +APRN+  +P+ SY+GSAYP+ PG+QY
Sbjct: 253  MPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNY-AVPSASYMGSAYPALPGLQY 311

Query: 911  PMAYPGGIMSHRPINSSRGLTPPAIXXXXXXXXXXXXXXI--QVEGPP 1048
            PMAY GGIMSH+P++ S G  PPA+                 QVEGPP
Sbjct: 312  PMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGPP 359


>ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|222861150|gb|EEE98692.1|
            predicted protein [Populus trichocarpa]
          Length = 432

 Score =  472 bits (1215), Expect = e-131
 Identities = 240/352 (68%), Positives = 275/352 (78%), Gaps = 3/352 (0%)
 Frame = +2

Query: 2    KEKGQDSCSGEERECVKLFVGQVPKHMSEAELVCMFKEVALVDEVNVIKDKTTRASRGCC 181
            ++K   S S    E VKLFVGQVPK+M+EAEL+ MFK+ ALVDEVN+IKDKTTRASRGCC
Sbjct: 1    EKKSSSSSSSSNEESVKLFVGQVPKNMTEAELLAMFKDFALVDEVNIIKDKTTRASRGCC 60

Query: 182  FVICPSREEADKAVNACHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSDPEV 361
            F+ICPSR+EADKAVNACHNK+TLPGASSPLQVKYADGELERLEHKLFVGMLPKNVS+ EV
Sbjct: 61   FLICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEV 120

Query: 362  SSLFSIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKYKMEGSSVPLVVK 541
            S LFS YGTIKDLQILRGSQQTSK CAFLKYETKEQALAALE INGK+KMEGSSVPLVVK
Sbjct: 121  SDLFSKYGTIKDLQILRGSQQTSKSCAFLKYETKEQALAALEDINGKHKMEGSSVPLVVK 180

Query: 542  WADTXXXXXXXXXXXXXXXXXGVSNTDSTQQPSLFGALPMGYIPPFNGFSYQAPGTYGLM 721
            WADT                  + NTDS Q PSLFGALPMGY PP+NG+ YQAPG YGLM
Sbjct: 181  WADT--EKERQARRAQKAQSQAMPNTDS-QHPSLFGALPMGYAPPYNGYGYQAPGVYGLM 237

Query: 722  QYPLQPMQNQPGFHNLIPPINRGSALR-GVSPDLPPGIAPRNFVTMPAGSYIGSAYPSAP 898
             Y L PMQNQP FH+++PP+N+G+ LR G+ PDL P I+PRN+   PA +Y+GSAYP+  
Sbjct: 238  PYRLPPMQNQPAFHSMVPPVNQGNVLRGGIRPDLSPNISPRNYA--PA-TYMGSAYPTVT 294

Query: 899  GIQYPMAYPGGIMSHRPINSSRGLTPPAI--XXXXXXXXXXXXXXIQVEGPP 1048
            G+QYP+AYPG +M+HRP++SS G   P +                +QVEGPP
Sbjct: 295  GLQYPVAYPGAMMTHRPLSSSPGALSPTVVSSNSATPSGVGGSSGVQVEGPP 346


>ref|XP_004148884.1| PREDICTED: CUGBP Elav-like family member 2-like [Cucumis sativus]
            gi|449491521|ref|XP_004158924.1| PREDICTED: CUGBP
            Elav-like family member 2-like [Cucumis sativus]
          Length = 438

 Score =  464 bits (1193), Expect = e-128
 Identities = 234/345 (67%), Positives = 270/345 (78%)
 Frame = +2

Query: 14   QDSCSGEERECVKLFVGQVPKHMSEAELVCMFKEVALVDEVNVIKDKTTRASRGCCFVIC 193
            ++S + EE + VKLFVGQVPKHM+E +L+ MF+E ALVDEVN+I+DKTTRASRGCCFVIC
Sbjct: 11   KESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVIC 70

Query: 194  PSREEADKAVNACHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSDPEVSSLF 373
            PSR+EADKAVNACHNK+TLPGASSPLQVKYADGELERLEHKLF+GMLPKNVS+ EVS LF
Sbjct: 71   PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSGLF 130

Query: 374  SIYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKYKMEGSSVPLVVKWADT 553
            S YGTIKDLQILRGSQQTSKGCAFLKYETK+QA+AALEAINGK KMEGSSVPLVVKWADT
Sbjct: 131  SQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADT 190

Query: 554  XXXXXXXXXXXXXXXXXGVSNTDSTQQPSLFGALPMGYIPPFNGFSYQAPGTYGLMQYPL 733
                              V N DS Q PSLFGA+P+GY+PP+NG+ YQAPG+YGLMQY L
Sbjct: 191  EKERQARKAQKAQSQATNVLNADS-QHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHL 249

Query: 734  QPMQNQPGFHNLIPPINRGSALRGVSPDLPPGIAPRNFVTMPAGSYIGSAYPSAPGIQYP 913
             PMQNQ GF N+IP +N+G+A+RG+ PDL PG+A RN+  MP  SY  SAYP  P +Q+P
Sbjct: 250  PPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNY-AMPPASY--SAYPGVPALQHP 306

Query: 914  MAYPGGIMSHRPINSSRGLTPPAIXXXXXXXXXXXXXXIQVEGPP 1048
            MAYPGG+MS   ++SS G  P                  Q+EGPP
Sbjct: 307  MAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIEGPP 351