BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019580
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524706.1| cyclin d, putative [Ricinus communis] gi|223...   120   1e-25
emb|CAO00120.1| D6-type cyclin [Populus trichocarpa]                  114   6e-24
ref|XP_002267937.2| PREDICTED: putative cyclin-D6-1-like, partia...   113   1e-23
emb|CBI40871.3| unnamed protein product [Vitis vinifera]              113   1e-23
emb|CBI18003.3| unnamed protein product [Vitis vinifera]              112   4e-23

>ref|XP_002524706.1| cyclin d, putative [Ricinus communis] gi|223536067|gb|EEF37725.1|
           cyclin d, putative [Ricinus communis]
          Length = 305

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/81 (70%), Positives = 71/81 (87%)
 Frame = +2

Query: 8   WRMRSITPFSFIHFFLSLFKLQDPLLQHALKARASDIIYKSQHEIKLLKFRPSIVTASAL 187
           WRMRSITPFSF+HFF+SLF+L+DP L  ALK RA++II+K+ HEIKLL+FRPS++ ASAL
Sbjct: 145 WRMRSITPFSFLHFFISLFELKDPPLTQALKDRATEIIFKAHHEIKLLEFRPSVIAASAL 204

Query: 188 LEASHELFPLQFSSFRNTICS 250
           L ASHELFPLQ+ SF+ +I S
Sbjct: 205 LVASHELFPLQYPSFKCSIFS 225


>emb|CAO00120.1| D6-type cyclin [Populus trichocarpa]
          Length = 156

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/79 (69%), Positives = 68/79 (86%)
 Frame = +2

Query: 8   WRMRSITPFSFIHFFLSLFKLQDPLLQHALKARASDIIYKSQHEIKLLKFRPSIVTASAL 187
           WRMRSITPFSFI FF+SLFK +DP L+ ALKARAS+II+K+Q++I LL+F+PS++ ASAL
Sbjct: 23  WRMRSITPFSFISFFISLFKPKDPPLRQALKARASEIIFKAQNDINLLEFKPSLIAASAL 82

Query: 188 LEASHELFPLQFSSFRNTI 244
           L ASHELFP+QF  FR  I
Sbjct: 83  LYASHELFPMQFLCFRKAI 101


>ref|XP_002267937.2| PREDICTED: putative cyclin-D6-1-like, partial [Vitis vinifera]
          Length = 327

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/81 (66%), Positives = 71/81 (87%)
 Frame = +2

Query: 8   WRMRSITPFSFIHFFLSLFKLQDPLLQHALKARASDIIYKSQHEIKLLKFRPSIVTASAL 187
           WRMRSITPFSF++FF+SLF+L+DP L  ALK RA+++I+K++ EIKLL+++PSI+ ASAL
Sbjct: 133 WRMRSITPFSFVYFFISLFELKDPALTKALKDRATELIFKARDEIKLLEYKPSIIAASAL 192

Query: 188 LEASHELFPLQFSSFRNTICS 250
           L AS+ELFPLQFSSF+  I S
Sbjct: 193 LCASYELFPLQFSSFKAAISS 213


>emb|CBI40871.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/81 (66%), Positives = 71/81 (87%)
 Frame = +2

Query: 8   WRMRSITPFSFIHFFLSLFKLQDPLLQHALKARASDIIYKSQHEIKLLKFRPSIVTASAL 187
           WRMRSITPFSF++FF+SLF+L+DP L  ALK RA+++I+K++ EIKLL+++PSI+ ASAL
Sbjct: 216 WRMRSITPFSFVYFFISLFELKDPALTKALKDRATELIFKARDEIKLLEYKPSIIAASAL 275

Query: 188 LEASHELFPLQFSSFRNTICS 250
           L AS+ELFPLQFSSF+  I S
Sbjct: 276 LCASYELFPLQFSSFKAAISS 296


>emb|CBI18003.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  112 bits (279), Expect = 4e-23
 Identities = 56/80 (70%), Positives = 63/80 (78%)
 Frame = +2

Query: 5   KWRMRSITPFSFIHFFLSLFKLQDPLLQHALKARASDIIYKSQHEIKLLKFRPSIVTASA 184
           KWRMRS+TPFSFI FF+SLFKL+DP L  ALKAR  +II KSQ EIKLL+F+PSI+ AS 
Sbjct: 142 KWRMRSVTPFSFISFFISLFKLKDPPLLEALKARVIEIILKSQKEIKLLQFKPSIIAAST 201

Query: 185 LLEASHELFPLQFSSFRNTI 244
           LL A HELFPLQF  F   I
Sbjct: 202 LLYACHELFPLQFPCFMTAI 221