BLASTX nr result

ID: Coptis23_contig00019561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019561
         (874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|2...   392   e-107
ref|XP_003549747.1| PREDICTED: topless-related protein 4-like [G...   390   e-106
ref|XP_003633080.1| PREDICTED: topless-related protein 4-like [V...   390   e-106
ref|XP_003633079.1| PREDICTED: topless-related protein 4-like [V...   390   e-106
ref|XP_002285341.2| PREDICTED: topless-related protein 4-like is...   390   e-106

>ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|222866075|gb|EEF03206.1|
            predicted protein [Populus trichocarpa]
          Length = 1126

 Score =  392 bits (1008), Expect = e-107
 Identities = 202/295 (68%), Positives = 236/295 (80%), Gaps = 5/295 (1%)
 Frame = +3

Query: 3    LMTTIEADGGLPASPRIRFNKEGMMLAVSTNDNGIKILANTDGLRLLHS-----FEAPRS 167
            L+TTI+A+GGLPASP IRFNKEG +LAVSTNDN IKILAN+DG+RLL +     F+A R+
Sbjct: 623  LLTTIDAEGGLPASPCIRFNKEGTLLAVSTNDNSIKILANSDGIRLLRTVESRTFDASRA 682

Query: 168  ASENVAKASTIGTLGGASLNPGTSLAVADRGAPVSSIIGLNGDNRSLADVKPRIVDESME 347
            +S  VAKA  IGT   A+   GTS  + ++ AP + ++G+N DNRSL DVKP+I DES+E
Sbjct: 683  SSAAVAKAPAIGTFPPANATVGTS--IDNQAAPAAPMVGMNSDNRSLVDVKPKIQDESIE 740

Query: 348  KSKIWKLSEINEPSQCRSLKLPDNLLPVRVSRLIYTNSGLAILALASNAVHKLWKWQRNE 527
            KS+IWKL+EINEPSQCRSL+LPD+L  +RVSRLI+TNSG+AILALASNAVHKLWKWQRN+
Sbjct: 741  KSRIWKLTEINEPSQCRSLRLPDSLTAMRVSRLIFTNSGVAILALASNAVHKLWKWQRND 800

Query: 528  RNPTGKASSIAPPQLWQPSSGILMTNETSEANPEDAVPCFALSKNDSYVMSASGGKISLF 707
            RN  GKA++  PPQLWQPSSGILMTN+ S+ NPEDAVPCFALSKNDSYVMSASGGKISLF
Sbjct: 801  RNLPGKATASVPPQLWQPSSGILMTNDISDTNPEDAVPCFALSKNDSYVMSASGGKISLF 860

Query: 708  NXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLK 872
            N                      HPQDNNIIAIGM+DSSIQIYNVRVDEVK+KLK
Sbjct: 861  NMMTFKTMTTFMAPPPAATFLAFHPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLK 915


>ref|XP_003549747.1| PREDICTED: topless-related protein 4-like [Glycine max]
          Length = 1134

 Score =  390 bits (1003), Expect = e-106
 Identities = 201/295 (68%), Positives = 235/295 (79%), Gaps = 5/295 (1%)
 Frame = +3

Query: 3    LMTTIEADGGLPASPRIRFNKEGMMLAVSTNDNGIKILANTDGLRLLHS-----FEAPRS 167
            ++T++EA+GGL ASP IRFNK+G++LAVSTNDNG+KILAN +G+RLL +     F+A R 
Sbjct: 633  MLTSVEAEGGLLASPCIRFNKDGILLAVSTNDNGVKILANAEGIRLLRTVENRTFDASRV 692

Query: 168  ASENVAKASTIGTLGGASLNPGTSLAVADRGAPVSSIIGLNGDNRSLADVKPRIVDESME 347
            AS  V KA TIG     ++  GTSLA  DR  PV++++G+N D R+LADVKPRIVDES+E
Sbjct: 693  ASAAVVKAPTIGAFPSTNVTVGTSLA--DRAPPVAAMVGINNDTRNLADVKPRIVDESVE 750

Query: 348  KSKIWKLSEINEPSQCRSLKLPDNLLPVRVSRLIYTNSGLAILALASNAVHKLWKWQRNE 527
            KS+IWKL+EINEPSQCRSLKLPD+L  +RVSRLIYTN G+AILALA+NAVHKLWKWQRNE
Sbjct: 751  KSRIWKLTEINEPSQCRSLKLPDSLSSMRVSRLIYTNQGVAILALAANAVHKLWKWQRNE 810

Query: 528  RNPTGKASSIAPPQLWQPSSGILMTNETSEANPEDAVPCFALSKNDSYVMSASGGKISLF 707
            RN TGKA++   PQLWQPSSGILMTN+ S+ NPEDAV CFALSKNDSYVMSASGGKISLF
Sbjct: 811  RNTTGKATASIQPQLWQPSSGILMTNDISDTNPEDAVSCFALSKNDSYVMSASGGKISLF 870

Query: 708  NXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLK 872
            N                      HPQDNNIIAIGM+DSSIQIYNVRVDEVK+KLK
Sbjct: 871  NMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLK 925


>ref|XP_003633080.1| PREDICTED: topless-related protein 4-like [Vitis vinifera]
          Length = 1123

 Score =  390 bits (1001), Expect = e-106
 Identities = 202/295 (68%), Positives = 230/295 (77%), Gaps = 5/295 (1%)
 Frame = +3

Query: 3    LMTTIEADGGLPASPRIRFNKEGMMLAVSTNDNGIKILANTDGLRLLH-----SFEAPRS 167
            L+ T +A+GGLPASP IRFNKEG++LAVSTN+NGIKILAN +G+RLL      SF+A R 
Sbjct: 621  LLMTTDAEGGLPASPCIRFNKEGILLAVSTNENGIKILANQEGIRLLRTMENRSFDASRV 680

Query: 168  ASENVAKASTIGTLGGASLNPGTSLAVADRGAPVSSIIGLNGDNRSLADVKPRIVDESME 347
            AS  V KA  IGT   A  NP    ++ DR APV++++G+N DNRSL DVKPRI DES E
Sbjct: 681  ASAAVVKAPAIGTFPPA--NPAVGTSIGDRAAPVAAMVGMNSDNRSLVDVKPRIADESGE 738

Query: 348  KSKIWKLSEINEPSQCRSLKLPDNLLPVRVSRLIYTNSGLAILALASNAVHKLWKWQRNE 527
            KS+IWKL+EINE SQCRSL+LPDNL  +RVSRL+YTNSG AILALASNAVHKLWKWQRN+
Sbjct: 739  KSRIWKLTEINEQSQCRSLRLPDNLTAMRVSRLMYTNSGFAILALASNAVHKLWKWQRND 798

Query: 528  RNPTGKASSIAPPQLWQPSSGILMTNETSEANPEDAVPCFALSKNDSYVMSASGGKISLF 707
            RN T KA++   PQLWQPSSGILMTNE S+ NPEDAVPCFALSKNDSYVMSASGGK+SLF
Sbjct: 799  RNITTKATASVAPQLWQPSSGILMTNEISDTNPEDAVPCFALSKNDSYVMSASGGKVSLF 858

Query: 708  NXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLK 872
            N                      HPQDNNIIAIGM+DSSIQIYNVRVDEVK+KLK
Sbjct: 859  NMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLK 913


>ref|XP_003633079.1| PREDICTED: topless-related protein 4-like [Vitis vinifera]
          Length = 1123

 Score =  390 bits (1001), Expect = e-106
 Identities = 202/295 (68%), Positives = 230/295 (77%), Gaps = 5/295 (1%)
 Frame = +3

Query: 3    LMTTIEADGGLPASPRIRFNKEGMMLAVSTNDNGIKILANTDGLRLLH-----SFEAPRS 167
            L+ T +A+GGLPASP IRFNKEG++LAVSTN+NGIKILAN +G+RLL      SF+A R 
Sbjct: 621  LLMTTDAEGGLPASPCIRFNKEGILLAVSTNENGIKILANQEGIRLLRTMENRSFDASRV 680

Query: 168  ASENVAKASTIGTLGGASLNPGTSLAVADRGAPVSSIIGLNGDNRSLADVKPRIVDESME 347
            AS  V KA  IGT   A  NP    ++ DR APV++++G+N DNRSL DVKPRI DES E
Sbjct: 681  ASAAVVKAPAIGTFPPA--NPAVGTSIGDRAAPVAAMVGMNSDNRSLVDVKPRIADESGE 738

Query: 348  KSKIWKLSEINEPSQCRSLKLPDNLLPVRVSRLIYTNSGLAILALASNAVHKLWKWQRNE 527
            KS+IWKL+EINE SQCRSL+LPDNL  +RVSRL+YTNSG AILALASNAVHKLWKWQRN+
Sbjct: 739  KSRIWKLTEINEQSQCRSLRLPDNLTAMRVSRLMYTNSGFAILALASNAVHKLWKWQRND 798

Query: 528  RNPTGKASSIAPPQLWQPSSGILMTNETSEANPEDAVPCFALSKNDSYVMSASGGKISLF 707
            RN T KA++   PQLWQPSSGILMTNE S+ NPEDAVPCFALSKNDSYVMSASGGK+SLF
Sbjct: 799  RNITTKATASVAPQLWQPSSGILMTNEISDTNPEDAVPCFALSKNDSYVMSASGGKVSLF 858

Query: 708  NXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLK 872
            N                      HPQDNNIIAIGM+DSSIQIYNVRVDEVK+KLK
Sbjct: 859  NMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLK 913


>ref|XP_002285341.2| PREDICTED: topless-related protein 4-like isoform 1 [Vitis vinifera]
            gi|297738983|emb|CBI28228.3| unnamed protein product
            [Vitis vinifera]
          Length = 1133

 Score =  390 bits (1001), Expect = e-106
 Identities = 202/295 (68%), Positives = 230/295 (77%), Gaps = 5/295 (1%)
 Frame = +3

Query: 3    LMTTIEADGGLPASPRIRFNKEGMMLAVSTNDNGIKILANTDGLRLLH-----SFEAPRS 167
            L+ T +A+GGLPASP IRFNKEG++LAVSTN+NGIKILAN +G+RLL      SF+A R 
Sbjct: 631  LLMTTDAEGGLPASPCIRFNKEGILLAVSTNENGIKILANQEGIRLLRTMENRSFDASRV 690

Query: 168  ASENVAKASTIGTLGGASLNPGTSLAVADRGAPVSSIIGLNGDNRSLADVKPRIVDESME 347
            AS  V KA  IGT   A  NP    ++ DR APV++++G+N DNRSL DVKPRI DES E
Sbjct: 691  ASAAVVKAPAIGTFPPA--NPAVGTSIGDRAAPVAAMVGMNSDNRSLVDVKPRIADESGE 748

Query: 348  KSKIWKLSEINEPSQCRSLKLPDNLLPVRVSRLIYTNSGLAILALASNAVHKLWKWQRNE 527
            KS+IWKL+EINE SQCRSL+LPDNL  +RVSRL+YTNSG AILALASNAVHKLWKWQRN+
Sbjct: 749  KSRIWKLTEINEQSQCRSLRLPDNLTAMRVSRLMYTNSGFAILALASNAVHKLWKWQRND 808

Query: 528  RNPTGKASSIAPPQLWQPSSGILMTNETSEANPEDAVPCFALSKNDSYVMSASGGKISLF 707
            RN T KA++   PQLWQPSSGILMTNE S+ NPEDAVPCFALSKNDSYVMSASGGK+SLF
Sbjct: 809  RNITTKATASVAPQLWQPSSGILMTNEISDTNPEDAVPCFALSKNDSYVMSASGGKVSLF 868

Query: 708  NXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLK 872
            N                      HPQDNNIIAIGM+DSSIQIYNVRVDEVK+KLK
Sbjct: 869  NMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMEDSSIQIYNVRVDEVKTKLK 923


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