BLASTX nr result

ID: Coptis23_contig00019560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019560
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004927485.1| orf105 (mitochondrion) [Brassica oleracea] g...    57   1e-06

>ref|YP_004927485.1| orf105 (mitochondrion) [Brassica oleracea]
           gi|335354958|gb|AEH43513.1| orf105 [Brassica oleracea]
          Length = 105

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/52 (46%), Positives = 40/52 (76%)
 Frame = -2

Query: 274 EAIVFILQSGFLISSFVIYIYCYQLMFPGIEKGNLVNNLQVIAQLSCFLFNF 119
           + ++F+L   FL++SF +++  +Q+++P I+KG+LVN LQV+AQLSC L  F
Sbjct: 41  KTLIFLLSIVFLVASFFVFVVSHQVIYPEIDKGDLVNPLQVLAQLSCLLVLF 92


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