BLASTX nr result

ID: Coptis23_contig00019559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019559
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322631.1| predicted protein [Populus trichocarpa] gi|2...   171   1e-40
ref|XP_002307990.1| predicted protein [Populus trichocarpa] gi|2...   161   1e-37
gb|ABO36619.1| hypothetical protein LYC_68t000001 [Solanum lycop...   141   2e-31
ref|XP_002307991.1| predicted protein [Populus trichocarpa] gi|2...   137   2e-30
ref|XP_002336949.1| predicted protein [Populus trichocarpa] gi|2...   135   9e-30

>ref|XP_002322631.1| predicted protein [Populus trichocarpa] gi|222867261|gb|EEF04392.1|
           predicted protein [Populus trichocarpa]
          Length = 466

 Score =  171 bits (434), Expect = 1e-40
 Identities = 96/220 (43%), Positives = 131/220 (59%), Gaps = 5/220 (2%)
 Frame = +2

Query: 173 ERVSSVIMEEASKHQSQRG-DWLINIMMDGTEERSSQSHMNPRIQKVAPRLRDVEAYKKC 349
           E +   I +EA+ H S    +WL  I+ +G  +  +     P+I KV   LR +++ +KC
Sbjct: 3   EEIKISIPQEANSHFSGGPHEWLAFIITEGQIKTGNSQMQVPQIPKVPRLLRQIQSNQKC 62

Query: 350 FDPALASIGPYHHGRPEFQLMEKLKTISARQFVSACNVRPEVVYSKVFEAVVQARECYSE 529
           +DP+L SIGPYHHG+PE + MEKLK     +FV    +  E  Y KV E  + AR CY+E
Sbjct: 63  YDPSLVSIGPYHHGKPELRDMEKLKVTFTSKFVDDSGICIEDFYCKVAEVAIDARRCYAE 122

Query: 530 GSTSAFDDEAFTRIMFLDGCFILQFIYCITTDQQCELTTCCHSAAFLLRDLFLLENQLPF 709
            ST  FDDE FT+IMFLDGCFILQFI+ +    + +L    H    + RDL LLENQLPF
Sbjct: 123 DSTDEFDDEKFTQIMFLDGCFILQFIFFLLRRPE-DLKMPGHQVVLVKRDLLLLENQLPF 181

Query: 710 LILQALMRVRFIKDEG---ENMVNKFINQ-RISPPGRCSL 817
            ++ +LM +RF K EG     ++N FI   R  PP + S+
Sbjct: 182 QVIWSLMNLRFGKGEGGGRNKLINDFIRHIRALPPRKESI 221


>ref|XP_002307990.1| predicted protein [Populus trichocarpa] gi|222853966|gb|EEE91513.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score =  161 bits (408), Expect = 1e-37
 Identities = 87/201 (43%), Positives = 121/201 (60%), Gaps = 2/201 (0%)
 Frame = +2

Query: 170 PERVSSVIMEEASKHQS-QRGDWLINIMMDGTEERSSQSHMN-PRIQKVAPRLRDVEAYK 343
           PE++  VI + AS  QS  R D  +  MMD   E++    +  P I +V P  R +E   
Sbjct: 2   PEKIDIVIADHASLQQSTSRFDEWLKSMMDRKREQTGNYQLGGPIIPRVPPTFRKIENNS 61

Query: 344 KCFDPALASIGPYHHGRPEFQLMEKLKTISARQFVSACNVRPEVVYSKVFEAVVQARECY 523
            C+DP++ SIGPYHHG+PE + ME  K   A QFV    V P+ ++ KV      AR+CY
Sbjct: 62  GCYDPSVVSIGPYHHGKPELKEMEDNKVTFASQFVMESQVAPDTMFCKVEGVASNARKCY 121

Query: 524 SEGSTSAFDDEAFTRIMFLDGCFILQFIYCITTDQQCELTTCCHSAAFLLRDLFLLENQL 703
           +E ST  F+D+ F+++MFLDGCFIL F +C+ ++Q  +L    H  + + RDLFLLENQL
Sbjct: 122 TEDSTQKFEDKEFSQMMFLDGCFILHFFFCL-SEQPEKLKMSNHHVSLVARDLFLLENQL 180

Query: 704 PFLILQALMRVRFIKDEGENM 766
           PF +L  LM +RF    GE +
Sbjct: 181 PFEVLLELMSLRFNIQGGERV 201


>gb|ABO36619.1| hypothetical protein LYC_68t000001 [Solanum lycopersicum]
           gi|133711816|gb|ABO36633.1| hypothetical protein
           SUNLYC_67t000002 [Solanum lycopersicum]
          Length = 486

 Score =  141 bits (356), Expect = 2e-31
 Identities = 73/168 (43%), Positives = 101/168 (60%), Gaps = 5/168 (2%)
 Frame = +2

Query: 296 RIQKVAPRLRDVEAYKKCFDPALASIGPYHHGRPEFQLMEKLKTISARQFVSACNVRPEV 475
           RIQKV P L+  E  +  +DP + S+GPYHHG+ E QL E  K I+   FVS  +     
Sbjct: 66  RIQKVLPLLKTDEYNRHEYDPKVVSLGPYHHGKTELQLAEDFKHIALEMFVSGSSRDVAY 125

Query: 476 VYSKVFEAVVQARECYSEGSTSAFDDEAFTRIMFLDGCFILQFIYCITTDQQCELTTCCH 655
            Y+K+ E V  AR CY +GST  ++D  F  +M LD CFI+  I   TTD+  +L T  H
Sbjct: 126 FYNKILEVVDNARSCYVDGSTDKYNDHEFALMMLLDACFIINHIELSTTDRYNKLRTTRH 185

Query: 656 SAAFL-----LRDLFLLENQLPFLILQALMRVRFIKDEGENMVNKFIN 784
               L     +RD+FLLENQ+PF IL+ L+ +R+ KDEG+ ++  F+N
Sbjct: 186 HLGMLALSTTVRDMFLLENQIPFWILKLLISLRYDKDEGDELLEMFLN 233


>ref|XP_002307991.1| predicted protein [Populus trichocarpa] gi|222853967|gb|EEE91514.1|
           predicted protein [Populus trichocarpa]
          Length = 459

 Score =  137 bits (346), Expect = 2e-30
 Identities = 76/178 (42%), Positives = 108/178 (60%), Gaps = 7/178 (3%)
 Frame = +2

Query: 296 RIQKVAPRLRDVEAYKKCFDPALASIGPYHHGRPEFQLMEKLKTISARQFVSACNVRPEV 475
           ++ +V    R +E  KKC DP++ S+GPYHHG+ E + ME+LK   ARQFV  C +  E 
Sbjct: 19  KVPRVPSTFRKIEQNKKCNDPSMVSLGPYHHGKQELKEMEELKFPMARQFVKDCEMPFEA 78

Query: 476 VYSKVFEAVVQARECYSEGSTSAFD-DEAFTRIMFLDGCFILQFIYCITTDQQCELTTCC 652
           ++SKV E ++ A +CY E   +  + D+ F ++MFLDGCFILQF+ C     +  L    
Sbjct: 79  MWSKVKELMIGASKCYVEDIIAKLNKDDHFNQMMFLDGCFILQFLICFMQKPE-NLKISS 137

Query: 653 HSAAFLLRDLFLLENQLPFLILQALMRVRFIKDE---GENM---VNKFINQRISPPGR 808
           H A  + +DLFLLENQLPF +L++LM  R+ K +   GE M    + F + R  PP R
Sbjct: 138 HDAVLVTKDLFLLENQLPFSVLKSLMSFRYKKSDQGGGEGMKLFADFFKHIRAIPPRR 195


>ref|XP_002336949.1| predicted protein [Populus trichocarpa] gi|222837206|gb|EEE75585.1|
           predicted protein [Populus trichocarpa]
          Length = 237

 Score =  135 bits (341), Expect = 9e-30
 Identities = 83/193 (43%), Positives = 113/193 (58%), Gaps = 5/193 (2%)
 Frame = +2

Query: 251 MDGTEERSSQSHMNPRIQKVAPRLRDVEAYKKCFDPALASIGPYHHGRPE-FQLMEKLKT 427
           ++ TE  S Q    PRI++V      +E+ KKC++P + SIGPY+HG+ + F  MEK K 
Sbjct: 3   VERTETMSQQQ--GPRIRRVPQIFSGIESNKKCYEPMVVSIGPYYHGKLDGFLEMEKCKC 60

Query: 428 ISARQFVSACNVRP-EVVYSKVFEAVVQARECYSE-GSTSAFDDEAFTRIMFLDGCFILQ 601
              R FV        E +Y  V +    AR CY E GS    D   FT++MFLDGCF++Q
Sbjct: 61  NMVRGFVQQSGKHNIEELYKTVEDVAEVARRCYDEDGSVILNDMTKFTKMMFLDGCFVIQ 120

Query: 602 FIYCITTDQQCELTTCCHSAAFLLRDLFLLENQLPFLILQALMRVRFIKD-EGENMVNKF 778
           F++C+  D Q  L    H AA + RD+FLLENQLPFL+L++LM++RF  D EG  ++  F
Sbjct: 121 FMHCLLRDHQ-NLKMSSHFAALVARDMFLLENQLPFLVLRSLMKLRFGSDEEGIKLIKDF 179

Query: 779 INQ-RISPPGRCS 814
           I   R  P  R S
Sbjct: 180 IKHIRAMPRQRVS 192


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