BLASTX nr result

ID: Coptis23_contig00019535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019535
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327477.1| predicted protein [Populus trichocarpa] gi|1...    74   1e-11
ref|XP_002528503.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|XP_004156923.1| PREDICTED: uncharacterized LOC101211185 [Cuc...    73   3e-11
ref|XP_004145652.1| PREDICTED: uncharacterized protein LOC101211...    73   3e-11
gb|ABG57264.1| microtubule-associated protein [Populus tremula x...    72   4e-11

>ref|XP_002327477.1| predicted protein [Populus trichocarpa] gi|118481515|gb|ABK92700.1|
           unknown [Populus trichocarpa]
           gi|222836031|gb|EEE74452.1| predicted protein [Populus
           trichocarpa]
          Length = 176

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
 Frame = -1

Query: 374 LMPLFDKPFFPQRSTRPLTVPRDPSFHSFNSKLWRCKSSSESYSFQRFTH---QSSKPIK 204
           LMP FD+PFFPQRS+RPLTVPR+PSFH  NSK W C    E Y +    H    + KP+K
Sbjct: 117 LMPYFDRPFFPQRSSRPLTVPREPSFHMVNSKCWSCIPEDELYYYFEHAHPHDHAWKPVK 176


>ref|XP_002528503.1| conserved hypothetical protein [Ricinus communis]
           gi|223532063|gb|EEF33872.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 171

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/47 (68%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
 Frame = -1

Query: 374 LMPLFDKPFFPQRSTRPLTVPRDPSFHSFNSKLWRCKSSS-ESYSFQ 237
           LMP FD+PFFPQRS RPLT+PR+PSFH  NSK W C+S+  E Y FQ
Sbjct: 118 LMPFFDRPFFPQRSNRPLTIPREPSFHMLNSKCWSCQSAGHELYHFQ 164


>ref|XP_004156923.1| PREDICTED: uncharacterized LOC101211185 [Cucumis sativus]
          Length = 155

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/57 (61%), Positives = 42/57 (73%)
 Frame = -1

Query: 374 LMPLFDKPFFPQRSTRPLTVPRDPSFHSFNSKLWRCKSSSESYSFQRFTHQSSKPIK 204
           LMP FD+P+FPQRS RPLT+PR+PSF   N + W C + SE YSFQR   Q+ KPIK
Sbjct: 103 LMPYFDRPYFPQRSNRPLTIPREPSF-LMNKEQWSCNTDSELYSFQR---QALKPIK 155


>ref|XP_004145652.1| PREDICTED: uncharacterized protein LOC101211185 [Cucumis sativus]
          Length = 155

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/57 (61%), Positives = 42/57 (73%)
 Frame = -1

Query: 374 LMPLFDKPFFPQRSTRPLTVPRDPSFHSFNSKLWRCKSSSESYSFQRFTHQSSKPIK 204
           LMP FD+P+FPQRS RPLT+PR+PSF   N + W C + SE YSFQR   Q+ KPIK
Sbjct: 103 LMPYFDRPYFPQRSNRPLTIPREPSF-LMNKEQWSCNTDSELYSFQR---QALKPIK 155


>gb|ABG57264.1| microtubule-associated protein [Populus tremula x Populus
           tremuloides]
          Length = 176

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 31/50 (62%), Positives = 35/50 (70%)
 Frame = -1

Query: 374 LMPLFDKPFFPQRSTRPLTVPRDPSFHSFNSKLWRCKSSSESYSFQRFTH 225
           LMP FD+PFFPQRS+RPLTVPR+PSFH  NSK W C    E Y +    H
Sbjct: 117 LMPYFDRPFFPQRSSRPLTVPREPSFHMVNSKCWSCIPEDELYYYFEHAH 166


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