BLASTX nr result

ID: Coptis23_contig00019517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019517
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002885127.1| proton-dependent oligopeptide transport fami...   113   3e-23
ref|XP_002299719.1| predicted protein [Populus trichocarpa] gi|2...   112   6e-23
ref|NP_188239.1| major facilitator protein [Arabidopsis thaliana...   112   7e-23
dbj|BAB02684.1| peptide/amino acid transporter-like protein [Ara...   112   7e-23
gb|AAM20441.1| putative transport protein [Arabidopsis thaliana]      112   7e-23

>ref|XP_002885127.1| proton-dependent oligopeptide transport family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297330967|gb|EFH61386.1|
           proton-dependent oligopeptide transport family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 593

 Score =  113 bits (282), Expect = 3e-23
 Identities = 53/88 (60%), Positives = 69/88 (78%)
 Frame = +1

Query: 16  SPNSRQLALLYSSFVLMAIGSGNIRPCSMAFRADQLKRK*DSPNYKRILQSYFSWYYASI 195
           S  S QLALLYS+F L++IGSG IRPCS+AF ADQL  K ++P  +R+L+S+F WYYAS 
Sbjct: 137 SATSSQLALLYSAFALISIGSGGIRPCSLAFGADQLDNK-ENPKNERVLESFFGWYYASS 195

Query: 196 GLSILISMTIIVYIPDCFGWKWGFGVPA 279
            +++LI+ T+IVYI D  GWK GFG+PA
Sbjct: 196 SVAVLIAFTVIVYIQDHLGWKIGFGIPA 223


>ref|XP_002299719.1| predicted protein [Populus trichocarpa] gi|222846977|gb|EEE84524.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score =  112 bits (280), Expect = 6e-23
 Identities = 53/92 (57%), Positives = 70/92 (76%)
 Frame = +1

Query: 4   QTGESPNSRQLALLYSSFVLMAIGSGNIRPCSMAFRADQLKRK*DSPNYKRILQSYFSWY 183
           Q+ ++P + Q+ LL SSF LM+IG+G +RPCS+AF ADQL  K  +P  +R+L+S+F WY
Sbjct: 15  QSCKTPTTGQMTLLLSSFALMSIGAGGVRPCSIAFGADQLDNK-SNPKNERVLESFFGWY 73

Query: 184 YASIGLSILISMTIIVYIPDCFGWKWGFGVPA 279
           YAS  +S+LIS+T IVYI D  GWK GFGVPA
Sbjct: 74  YASAAISVLISLTAIVYIQDHLGWKVGFGVPA 105


>ref|NP_188239.1| major facilitator protein [Arabidopsis thaliana]
           gi|310947330|sp|Q8LPL2.2|PTR32_ARATH RecName:
           Full=Probable peptide/nitrate transporter At3g16180
           gi|332642260|gb|AEE75781.1| major facilitator protein
           [Arabidopsis thaliana]
          Length = 591

 Score =  112 bits (279), Expect = 7e-23
 Identities = 52/88 (59%), Positives = 69/88 (78%)
 Frame = +1

Query: 16  SPNSRQLALLYSSFVLMAIGSGNIRPCSMAFRADQLKRK*DSPNYKRILQSYFSWYYASI 195
           S  S QLALLY++F L++IGSG IRPCS+AF ADQL  K ++P  +R+L+S+F WYYAS 
Sbjct: 136 SATSSQLALLYTAFALISIGSGGIRPCSLAFGADQLDNK-ENPKNERVLESFFGWYYASS 194

Query: 196 GLSILISMTIIVYIPDCFGWKWGFGVPA 279
            +++LI+ T+IVYI D  GWK GFG+PA
Sbjct: 195 SVAVLIAFTVIVYIQDHLGWKIGFGIPA 222


>dbj|BAB02684.1| peptide/amino acid transporter-like protein [Arabidopsis thaliana]
          Length = 541

 Score =  112 bits (279), Expect = 7e-23
 Identities = 52/88 (59%), Positives = 69/88 (78%)
 Frame = +1

Query: 16  SPNSRQLALLYSSFVLMAIGSGNIRPCSMAFRADQLKRK*DSPNYKRILQSYFSWYYASI 195
           S  S QLALLY++F L++IGSG IRPCS+AF ADQL  K ++P  +R+L+S+F WYYAS 
Sbjct: 86  SATSSQLALLYTAFALISIGSGGIRPCSLAFGADQLDNK-ENPKNERVLESFFGWYYASS 144

Query: 196 GLSILISMTIIVYIPDCFGWKWGFGVPA 279
            +++LI+ T+IVYI D  GWK GFG+PA
Sbjct: 145 SVAVLIAFTVIVYIQDHLGWKIGFGIPA 172


>gb|AAM20441.1| putative transport protein [Arabidopsis thaliana]
          Length = 579

 Score =  112 bits (279), Expect = 7e-23
 Identities = 52/88 (59%), Positives = 69/88 (78%)
 Frame = +1

Query: 16  SPNSRQLALLYSSFVLMAIGSGNIRPCSMAFRADQLKRK*DSPNYKRILQSYFSWYYASI 195
           S  S QLALLY++F L++IGSG IRPCS+AF ADQL  K ++P  +R+L+S+F WYYAS 
Sbjct: 136 SATSSQLALLYTAFALISIGSGGIRPCSLAFGADQLDNK-ENPKNERVLESFFGWYYASS 194

Query: 196 GLSILISMTIIVYIPDCFGWKWGFGVPA 279
            +++LI+ T+IVYI D  GWK GFG+PA
Sbjct: 195 SVAVLIAFTVIVYIQDHLGWKIGFGIPA 222


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