BLASTX nr result

ID: Coptis23_contig00018493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018493
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20214.3| unnamed protein product [Vitis vinifera]              261   4e-68
ref|XP_002283012.1| PREDICTED: tRNA dimethylallyltransferase 9 [...   261   4e-68
ref|XP_002300421.1| tRNA isopentenyltransferase [Populus trichoc...   252   3e-65
ref|XP_004137218.1| PREDICTED: tRNA dimethylallyltransferase 9-l...   250   1e-64
ref|XP_002524264.1| ATP binding protein, putative [Ricinus commu...   250   1e-64

>emb|CBI20214.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  261 bits (668), Expect = 4e-68
 Identities = 127/149 (85%), Positives = 142/149 (95%)
 Frame = -1

Query: 449 NKEKVIVISGPTGAGKTRLALELAKKLNGEIISADSVQVYQGLDTGSAKPSLSDRKEVPH 270
           NKEKVIVISGPTGAGK+RLALELAK+LNGEIISADSVQVY+GLD GSAKPSL DRKEVPH
Sbjct: 31  NKEKVIVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLMDRKEVPH 90

Query: 269 HLIDILHPSEEYSVGRFFEDARQATREIIENGRVPIIAGGTGLYLRWYIYGKPEVPKASP 90
           HL+DILHPSE+YSVG+FFEDAR+ TR+I+ + RVPI+AGGTGLYLRW+IYGKP+VPKAS 
Sbjct: 91  HLVDILHPSEDYSVGQFFEDAREKTRDILNSERVPIVAGGTGLYLRWFIYGKPDVPKASR 150

Query: 89  EIASEVHSELIDLQRNGDWDAAVALVVKA 3
           EIASEV+SEL+DLQRNGDWDAAV LVVKA
Sbjct: 151 EIASEVYSELMDLQRNGDWDAAVQLVVKA 179


>ref|XP_002283012.1| PREDICTED: tRNA dimethylallyltransferase 9 [Vitis vinifera]
          Length = 447

 Score =  261 bits (668), Expect = 4e-68
 Identities = 127/149 (85%), Positives = 142/149 (95%)
 Frame = -1

Query: 449 NKEKVIVISGPTGAGKTRLALELAKKLNGEIISADSVQVYQGLDTGSAKPSLSDRKEVPH 270
           NKEKVIVISGPTGAGK+RLALELAK+LNGEIISADSVQVY+GLD GSAKPSL DRKEVPH
Sbjct: 46  NKEKVIVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLMDRKEVPH 105

Query: 269 HLIDILHPSEEYSVGRFFEDARQATREIIENGRVPIIAGGTGLYLRWYIYGKPEVPKASP 90
           HL+DILHPSE+YSVG+FFEDAR+ TR+I+ + RVPI+AGGTGLYLRW+IYGKP+VPKAS 
Sbjct: 106 HLVDILHPSEDYSVGQFFEDAREKTRDILNSERVPIVAGGTGLYLRWFIYGKPDVPKASR 165

Query: 89  EIASEVHSELIDLQRNGDWDAAVALVVKA 3
           EIASEV+SEL+DLQRNGDWDAAV LVVKA
Sbjct: 166 EIASEVYSELMDLQRNGDWDAAVQLVVKA 194


>ref|XP_002300421.1| tRNA isopentenyltransferase [Populus trichocarpa]
           gi|222847679|gb|EEE85226.1| tRNA isopentenyltransferase
           [Populus trichocarpa]
          Length = 443

 Score =  252 bits (643), Expect = 3e-65
 Identities = 120/148 (81%), Positives = 141/148 (95%)
 Frame = -1

Query: 446 KEKVIVISGPTGAGKTRLALELAKKLNGEIISADSVQVYQGLDTGSAKPSLSDRKEVPHH 267
           KEK+IVISGPTG+GKTRLALELAK+LNGEI+SADSVQVY+GLD GSAKP+ S+RKEV HH
Sbjct: 44  KEKLIVISGPTGSGKTRLALELAKRLNGEIVSADSVQVYRGLDVGSAKPTESERKEVRHH 103

Query: 266 LIDILHPSEEYSVGRFFEDARQATREIIENGRVPIIAGGTGLYLRWYIYGKPEVPKASPE 87
           L+DILHPSE+YSVG+F+EDARQAT++I++NGRVPI+ GGTGLYLRW+IYGKP+VPKASPE
Sbjct: 104 LLDILHPSEDYSVGQFYEDARQATQDILKNGRVPIVTGGTGLYLRWFIYGKPDVPKASPE 163

Query: 86  IASEVHSELIDLQRNGDWDAAVALVVKA 3
           IASEV+SEL +L+RN DWDAAV LVVKA
Sbjct: 164 IASEVYSELAELERNKDWDAAVQLVVKA 191


>ref|XP_004137218.1| PREDICTED: tRNA dimethylallyltransferase 9-like [Cucumis sativus]
           gi|449483192|ref|XP_004156518.1| PREDICTED: tRNA
           dimethylallyltransferase 9-like [Cucumis sativus]
          Length = 482

 Score =  250 bits (638), Expect = 1e-64
 Identities = 122/148 (82%), Positives = 136/148 (91%)
 Frame = -1

Query: 446 KEKVIVISGPTGAGKTRLALELAKKLNGEIISADSVQVYQGLDTGSAKPSLSDRKEVPHH 267
           K KVIVISGPTG+GK+RLA+ELAK+LNGEIISADSVQVYQGLD GSAKPS  DRKEVPHH
Sbjct: 68  KSKVIVISGPTGSGKSRLAMELAKRLNGEIISADSVQVYQGLDIGSAKPSARDRKEVPHH 127

Query: 266 LIDILHPSEEYSVGRFFEDARQATREIIENGRVPIIAGGTGLYLRWYIYGKPEVPKASPE 87
           LIDIL PS+EYSVGRFFEDARQATR +++NGRVPI+ GGTGLYLRW++YGKP VPKASP+
Sbjct: 128 LIDILRPSDEYSVGRFFEDARQATRCVLDNGRVPIVCGGTGLYLRWFMYGKPNVPKASPD 187

Query: 86  IASEVHSELIDLQRNGDWDAAVALVVKA 3
           IA+EV SEL DL+RN DWDAAV LVVKA
Sbjct: 188 IAAEVCSELADLRRNEDWDAAVQLVVKA 215


>ref|XP_002524264.1| ATP binding protein, putative [Ricinus communis]
           gi|223536455|gb|EEF38103.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 446

 Score =  250 bits (638), Expect = 1e-64
 Identities = 119/148 (80%), Positives = 139/148 (93%)
 Frame = -1

Query: 446 KEKVIVISGPTGAGKTRLALELAKKLNGEIISADSVQVYQGLDTGSAKPSLSDRKEVPHH 267
           +EKV+VISGPTGAGK+RLALELAK+LNGEIISADSVQVY+GLD GSAKPS ++RKEV HH
Sbjct: 40  REKVLVISGPTGAGKSRLALELAKRLNGEIISADSVQVYRGLDVGSAKPSPTERKEVRHH 99

Query: 266 LIDILHPSEEYSVGRFFEDARQATREIIENGRVPIIAGGTGLYLRWYIYGKPEVPKASPE 87
           LID+ HPSE+YSVG+FFEDARQATR+I++NGRVPI+AGGTGLYLRW++YGKP+VPKASPE
Sbjct: 100 LIDVSHPSEDYSVGKFFEDARQATRDILDNGRVPIVAGGTGLYLRWFVYGKPDVPKASPE 159

Query: 86  IASEVHSELIDLQRNGDWDAAVALVVKA 3
           IAS+V+SEL +LQ N DWDAAV LVV A
Sbjct: 160 IASQVYSELAELQENQDWDAAVQLVVNA 187


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