BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018492
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_002512344.1| excision repair cross-complementing 1 ercc1,...   117   8e-25
ref|XP_003574205.1| PREDICTED: DNA excision repair protein ERCC-...   116   2e-24
ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-...   116   2e-24
ref|NP_187172.1| DNA excision repair protein ERCC-1 [Arabidopsis...   114   6e-24

>ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|222838142|gb|EEE76507.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/67 (85%), Positives = 62/67 (92%)
 Frame = +2

Query: 20  LNHALTAVRRVNKTDVVTLGSNFGSLSRIMDSSMEDLARCPGIGEKKVKRLYDTFHEPFR 199
           L+HALT VRRVNKTDVVTLGS FGSLS IMD+SMEDLARCPGIGE+KVKRLYDTFHEPF+
Sbjct: 231 LHHALTTVRRVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFK 290

Query: 200 RAVTSQP 220
           R V+S P
Sbjct: 291 RVVSSHP 297


>ref|XP_002512344.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
           communis] gi|223548305|gb|EEF49796.1| excision repair
           cross-complementing 1 ercc1, putative [Ricinus communis]
          Length = 392

 Score =  117 bits (294), Expect = 8e-25
 Identities = 55/67 (82%), Positives = 60/67 (89%)
 Frame = +2

Query: 20  LNHALTAVRRVNKTDVVTLGSNFGSLSRIMDSSMEDLARCPGIGEKKVKRLYDTFHEPFR 199
           L HALT +R VNKTDVVTLGS FGSLS IMD+SMEDLARCPGIGE+KVKRLYDTFHEPF+
Sbjct: 237 LTHALTTIRHVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFK 296

Query: 200 RAVTSQP 220
           R V+S P
Sbjct: 297 RVVSSHP 303


>ref|XP_003574205.1| PREDICTED: DNA excision repair protein ERCC-1-like [Brachypodium
           distachyon]
          Length = 391

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/67 (83%), Positives = 63/67 (94%)
 Frame = +2

Query: 20  LNHALTAVRRVNKTDVVTLGSNFGSLSRIMDSSMEDLARCPGIGEKKVKRLYDTFHEPFR 199
           L HALT++RRVNKTDVVTLGS FGSLSRIMDSSME+LARCPGIGE+KVKR+YDTFHEPF+
Sbjct: 239 LTHALTSIRRVNKTDVVTLGSTFGSLSRIMDSSMEELARCPGIGERKVKRIYDTFHEPFK 298

Query: 200 RAVTSQP 220
           R VT +P
Sbjct: 299 R-VTPRP 304


>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
           gi|296088298|emb|CBI36743.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/67 (83%), Positives = 59/67 (88%)
 Frame = +2

Query: 20  LNHALTAVRRVNKTDVVTLGSNFGSLSRIMDSSMEDLARCPGIGEKKVKRLYDTFHEPFR 199
           L HALT VR VNKTDVVTLGS FGSLS IMD+SMEDLARCPGIGE+KVKRLYDTFHEPF+
Sbjct: 242 LTHALTTVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFK 301

Query: 200 RAVTSQP 220
           R V S P
Sbjct: 302 RVVPSCP 308


>ref|NP_187172.1| DNA excision repair protein ERCC-1 [Arabidopsis thaliana]
           gi|55976606|sp|Q9MA98.1|ERCC1_ARATH RecName: Full=DNA
           excision repair protein ERCC-1; Short=AtERCC1;
           Short=AtRAD10; AltName: Full=Ultraviolet hypersensitive
           7 gi|6729031|gb|AAF27027.1|AC009177_17 putative
           nucleotide repair protein [Arabidopsis thaliana]
           gi|9800490|gb|AAF99316.1|AF276082_1 ERCC1 [Arabidopsis
           thaliana] gi|15215614|gb|AAK91352.1| AT3g05210/T12H1_18
           [Arabidopsis thaliana] gi|21435979|gb|AAM51569.1|
           AT3g05210/T12H1_18 [Arabidopsis thaliana]
           gi|21618171|gb|AAM67221.1| putative nucleotide repair
           protein [Arabidopsis thaliana]
           gi|332640684|gb|AEE74205.1| DNA excision repair protein
           ERCC-1 [Arabidopsis thaliana]
          Length = 410

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/67 (77%), Positives = 62/67 (92%)
 Frame = +2

Query: 20  LNHALTAVRRVNKTDVVTLGSNFGSLSRIMDSSMEDLARCPGIGEKKVKRLYDTFHEPFR 199
           LNH+LT++R VNK+DVVTLGS FGSL+ I+D+SMEDLARCPGIGE+KVKRLYDTFHEPF+
Sbjct: 260 LNHSLTSIRHVNKSDVVTLGSTFGSLAHIIDASMEDLARCPGIGERKVKRLYDTFHEPFK 319

Query: 200 RAVTSQP 220
           RA +S P
Sbjct: 320 RATSSYP 326