BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018484
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15747.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-bi...   100   2e-19
ref|NP_568746.1| ATP-dependent Clp protease ATP-binding subunit ...    87   1e-15
ref|XP_003523172.1| PREDICTED: chaperone protein ClpC, chloropla...    87   2e-15
gb|AAC04687.1| ClpC [Arabidopsis thaliana]                             86   2e-15

>emb|CBI15747.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  100 bits (248), Expect = 2e-19
 Identities = 58/103 (56%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
 Frame = -1

Query: 303 KVGKY--SNNKKQTFQMRCNVTKPRLGFKSLSLTTISIGYRGFTGLRGTNALDTLVNSGI 130
           K GK+  S   K++ +M CNV  P L              RGF+GLRG NALD LV SG 
Sbjct: 67  KHGKFQGSERTKKSVKMMCNVQAPGLRI------------RGFSGLRGANALDNLVRSGH 114

Query: 129 DFHSKVEIWMRLPRGRGSRCVARAMFERFTEKAIKVIMLAQEE 1
           DFHS+V   + +  G+ SRCVARAMFERFTEKAIKVIMLAQEE
Sbjct: 115 DFHSRVAAAISVRGGKASRCVARAMFERFTEKAIKVIMLAQEE 157


>ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpA
           homolog CD4A, chloroplastic-like [Vitis vinifera]
          Length = 923

 Score =  100 bits (248), Expect = 2e-19
 Identities = 58/103 (56%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
 Frame = -1

Query: 303 KVGKY--SNNKKQTFQMRCNVTKPRLGFKSLSLTTISIGYRGFTGLRGTNALDTLVNSGI 130
           K GK+  S   K++ +M CNV  P L              RGF+GLRG NALD LV SG 
Sbjct: 19  KHGKFQGSERTKKSVKMMCNVQAPGLRI------------RGFSGLRGANALDNLVRSGH 66

Query: 129 DFHSKVEIWMRLPRGRGSRCVARAMFERFTEKAIKVIMLAQEE 1
           DFHS+V   + +  G+ SRCVARAMFERFTEKAIKVIMLAQEE
Sbjct: 67  DFHSRVAAAISVRGGKASRCVARAMFERFTEKAIKVIMLAQEE 109


>ref|NP_568746.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arabidopsis
           thaliana] gi|75170759|sp|Q9FI56.1|CLPC1_ARATH RecName:
           Full=Chaperone protein ClpC1, chloroplastic; AltName:
           Full=ATP-dependent Clp protease ATP-binding subunit ClpC
           homolog 1; AltName: Full=Casein lytic proteinase C1;
           AltName: Full=Protein DE-REGULATED CAO ACCUMULATION 1;
           AltName: Full=Protein IRON-RESCUED MUTANT 1; Flags:
           Precursor gi|9758239|dbj|BAB08738.1| ATP-dependent Clp
           protease, ATP-binding subunit [Arabidopsis thaliana]
           gi|20856956|gb|AAM26692.1| AT5g50920/K3K7_7 [Arabidopsis
           thaliana] gi|110742601|dbj|BAE99213.1| ATP-dependent Clp
           protease [Arabidopsis thaliana]
           gi|332008628|gb|AED96011.1| ATP-dependent Clp protease
           ATP-binding subunit ClpC [Arabidopsis thaliana]
          Length = 929

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 52/109 (47%), Positives = 63/109 (57%)
 Frame = -1

Query: 327 AIYSSNYVKVGKYSNNKKQTFQMRCNVTKPRLGFKSLSLTTISIGYRGFTGLRGTNALDT 148
           A Y  N    G  S   +++ +M C+            L    +  +GF GLRG NALDT
Sbjct: 17  ACYQRNVPSRG--SGRSRRSVKMMCS-----------QLQVSGLRMQGFMGLRGNNALDT 63

Query: 147 LVNSGIDFHSKVEIWMRLPRGRGSRCVARAMFERFTEKAIKVIMLAQEE 1
           L  S  DFHSKV   M +P+G+ SR   +AMFERFTEKAIKVIMLAQEE
Sbjct: 64  LGKSRQDFHSKVRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEE 112


>ref|XP_003523172.1| PREDICTED: chaperone protein ClpC, chloroplastic-like isoform 1
           [Glycine max] gi|356508863|ref|XP_003523173.1|
           PREDICTED: chaperone protein ClpC, chloroplastic-like
           isoform 2 [Glycine max]
          Length = 922

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 45/72 (62%), Positives = 52/72 (72%)
 Frame = -1

Query: 216 SLTTISIGYRGFTGLRGTNALDTLVNSGIDFHSKVEIWMRLPRGRGSRCVARAMFERFTE 37
           +L T  +   GF+GLR  N LDT++  GIDFHSKV I     R R +RCV +AMFERFTE
Sbjct: 38  ALRTNGLRMSGFSGLRTFNPLDTMLRPGIDFHSKVSIATSSRRARATRCVPKAMFERFTE 97

Query: 36  KAIKVIMLAQEE 1
           KAIKVIMLAQEE
Sbjct: 98  KAIKVIMLAQEE 109


>gb|AAC04687.1| ClpC [Arabidopsis thaliana]
          Length = 928

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/63 (69%), Positives = 49/63 (77%)
 Frame = -1

Query: 189 RGFTGLRGTNALDTLVNSGIDFHSKVEIWMRLPRGRGSRCVARAMFERFTEKAIKVIMLA 10
           +GF GLRG NALDTL  S  DFHSKV   M +P+G+ SR   +AMFERFTEKAIKVIMLA
Sbjct: 49  QGFMGLRGNNALDTLGKSRQDFHSKVRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLA 108

Query: 9   QEE 1
           QEE
Sbjct: 109 QEE 111