BLASTX nr result

ID: Coptis23_contig00018461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018461
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE53511.1| hypothetical protein OsJ_36687 [Oryza sativa Japo...    65   8e-09
gb|ABA99740.2| retrotransposon protein, putative, unclassified [...    65   8e-09
ref|XP_002446438.1| hypothetical protein SORBIDRAFT_06g016093 [S...    62   6e-08
ref|XP_002441714.1| hypothetical protein SORBIDRAFT_08g001155 [S...    60   2e-07
gb|EEE53448.1| hypothetical protein OsJ_36550 [Oryza sativa Japo...    58   9e-07

>gb|EEE53511.1| hypothetical protein OsJ_36687 [Oryza sativa Japonica Group]
          Length = 1441

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/71 (45%), Positives = 41/71 (57%)
 Frame = +1

Query: 1   VKFFFWGAIHGHTLTADALIQRGTMVSPTCLMCDSFDESILHLFLHCCFTLELWEKLMEP 180
           V+FF W A+ G  LTAD L +RG    PTCL+C S  E   HL + C FT  +W++L   
Sbjct: 509 VRFFLWLAVKGRCLTADNLSKRGWPHDPTCLLCQSAPEDCNHLLVKCPFTNRVWQQLKAW 568

Query: 181 VARVFPLLGQV 213
           V   FPL  Q+
Sbjct: 569 VNVTFPLPAQL 579


>gb|ABA99740.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1618

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/71 (45%), Positives = 41/71 (57%)
 Frame = +1

Query: 1   VKFFFWGAIHGHTLTADALIQRGTMVSPTCLMCDSFDESILHLFLHCCFTLELWEKLMEP 180
           V+FF W A+ G  LTAD L +RG    PTCL+C S  E   HL + C FT  +W++L   
Sbjct: 564 VRFFLWLAVKGRCLTADNLSKRGWPHDPTCLLCQSAPEDCNHLLVKCPFTNRVWQQLKAW 623

Query: 181 VARVFPLLGQV 213
           V   FPL  Q+
Sbjct: 624 VNVTFPLPAQL 634


>ref|XP_002446438.1| hypothetical protein SORBIDRAFT_06g016093 [Sorghum bicolor]
           gi|241937621|gb|EES10766.1| hypothetical protein
           SORBIDRAFT_06g016093 [Sorghum bicolor]
          Length = 318

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 25/62 (40%), Positives = 37/62 (59%)
 Frame = +1

Query: 1   VKFFFWGAIHGHTLTADALIQRGTMVSPTCLMCDSFDESILHLFLHCCFTLELWEKLMEP 180
           VKFFFW  +HG   T++   + G   SPTC++CD  DE+  HL   C +T E+W +++  
Sbjct: 237 VKFFFWLGLHGRLWTSERRARHGLQQSPTCVLCDQLDETHDHLLAACVYTREVWLRILST 296

Query: 181 VA 186
            A
Sbjct: 297 FA 298


>ref|XP_002441714.1| hypothetical protein SORBIDRAFT_08g001155 [Sorghum bicolor]
           gi|241942407|gb|EES15552.1| hypothetical protein
           SORBIDRAFT_08g001155 [Sorghum bicolor]
          Length = 370

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/54 (44%), Positives = 33/54 (61%)
 Frame = +1

Query: 1   VKFFFWGAIHGHTLTADALIQRGTMVSPTCLMCDSFDESILHLFLHCCFTLELW 162
           V+FFFW  +H    TA+   + G   S TC+MCD   E+I H+ L CCF+ E+W
Sbjct: 234 VRFFFWLVLHRRCWTAERRFRHGLQSSATCVMCDQLPETIDHILLGCCFSKEVW 287


>gb|EEE53448.1| hypothetical protein OsJ_36550 [Oryza sativa Japonica Group]
          Length = 394

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/70 (42%), Positives = 38/70 (54%)
 Frame = +1

Query: 1   VKFFFWGAIHGHTLTADALIQRGTMVSPTCLMCDSFDESILHLFLHCCFTLELWEKLMEP 180
           V+FF W A  G  LTAD L +RG      C++C    E  LHLF+ C F+  +W+ L   
Sbjct: 251 VRFFLWLATKGKCLTADNLAKRGWPHEDHCVLCQREQEDCLHLFITCDFSRRVWQLLRAW 310

Query: 181 VARVFPLLGQ 210
           V   FPL GQ
Sbjct: 311 VNVDFPLPGQ 320


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