BLASTX nr result

ID: Coptis23_contig00018459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018459
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like...   159   3e-37
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2...   153   1e-35
ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu...   145   3e-33
ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|g...   132   2e-29
ref|XP_004141809.1| PREDICTED: midasin-like [Cucumis sativus]         126   2e-27

>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
          Length = 5286

 Score =  159 bits (401), Expect = 3e-37
 Identities = 84/172 (48%), Positives = 101/172 (58%), Gaps = 4/172 (2%)
 Frame = -1

Query: 504  RFEYETQKLEAVLMPSDQSFLENDLSACCVFCPEKFHKKLSLSSWQEMFCLFDSTSFFLD 325
            RFE+E  KLEA     + SFL  +  ACCVFCPE   +K    SWQE   + DSTSFFLD
Sbjct: 2807 RFEHEKHKLEAKCGIEENSFLLENPVACCVFCPEVLCRKAGFDSWQETHSIIDSTSFFLD 2866

Query: 324  MELLKEFSSAILADGEELYKVXXXXXXXXXXXLKFSLKFSSRPPTDFIPHQTMLWALDAW 145
            MELL+E S  +L D +EL              + FSL FSSRPPT F+PHQ  LW LDAW
Sbjct: 2867 MELLQELSLVVLVDAKELQLALSSASDLLEYAMNFSLNFSSRPPTIFLPHQKFLWTLDAW 2926

Query: 144  DSVDSVNTKIASSILEMWFNWHSLLWIHCPEPF----KVASCDSPLPYMLFQ 1
            +SV++        +LEMWF WHS LWI+ P       K+ + D PLP ML Q
Sbjct: 2927 ESVNA-----GHFVLEMWFRWHSSLWINHPASVKNFSKIDAYDIPLPAMLVQ 2973


>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
            predicted protein [Populus trichocarpa]
          Length = 5317

 Score =  153 bits (387), Expect = 1e-35
 Identities = 83/172 (48%), Positives = 103/172 (59%), Gaps = 4/172 (2%)
 Frame = -1

Query: 504  RFEYETQKLEAVLMPSDQSFLENDLSACCVFCPEKFHKKLSLSSWQEMFCLFDSTSFFLD 325
            RFEYE  KLEA     + + +E +  +CC F PE    K   + W E   + D+TSFFLD
Sbjct: 2840 RFEYEKSKLEAKSKSVETATIEGNSISCCDFSPEARCTKPGFACWLETRPIIDNTSFFLD 2899

Query: 324  MELLKEFSSAILADGEELYKVXXXXXXXXXXXLKFSLKFSSRPPTDFIPHQTMLWALDAW 145
            M+LL++ S  +L D +E               +K SL FS+RPP +FIPHQ +LW LDAW
Sbjct: 2900 MDLLQKLSMIVLVDHKECQLALGSVSNLIESAMKHSLTFSTRPPQNFIPHQKILWTLDAW 2959

Query: 144  DSVDSVNTKIASSILEMWFNWHSLLWIHCP---EPF-KVASCDSPLPYMLFQ 1
             SVD+VN KIAS +LEMWF WHS LW HCP   E F KV    +PLP ML Q
Sbjct: 2960 MSVDAVNAKIASYVLEMWFWWHSSLWSHCPVFSENFGKVDGYHTPLPDMLVQ 3011


>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
            gi|223539440|gb|EEF41030.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 5282

 Score =  145 bits (366), Expect = 3e-33
 Identities = 80/172 (46%), Positives = 97/172 (56%), Gaps = 4/172 (2%)
 Frame = -1

Query: 504  RFEYETQKLEAVLMPSDQSFLENDLSACCVFCPEKFHKKLSLSSWQEMFCLFDSTSFFLD 325
            RF YE  KLEA L       LE D + CCVF PE    K   +SWQE   + DSTSFFLD
Sbjct: 2787 RFGYEKCKLEAKLQSYGNFILEADSATCCVFFPEILCMKSGFASWQEALPVVDSTSFFLD 2846

Query: 324  MELLKEFSSAILADGEELYKVXXXXXXXXXXXLKFSLKFSSRPPTDFIPHQTMLWALDAW 145
            +ELL++ S  +L D  EL              LK+SL FS+RPP +F+PHQ +LW L+AW
Sbjct: 2847 IELLQKLSMVVLIDPTELQLALGGVSNMLESALKYSLTFSARPPQNFVPHQNILWTLEAW 2906

Query: 144  DSVDSVNTKIASSILEMWFNWHSLLWIHCPEPF----KVASCDSPLPYMLFQ 1
             SVD+        +LEMWF WHS LW HCP       +V   D P+P ML Q
Sbjct: 2907 ASVDA-----GYYVLEMWFWWHSSLWNHCPVSVEGCTRVDGYDIPIPAMLAQ 2953


>ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|gb|AET01690.1| Midasin
            [Medicago truncatula]
          Length = 5078

 Score =  132 bits (333), Expect = 2e-29
 Identities = 71/151 (47%), Positives = 89/151 (58%)
 Frame = -1

Query: 504  RFEYETQKLEAVLMPSDQSFLENDLSACCVFCPEKFHKKLSLSSWQEMFCLFDSTSFFLD 325
            R E+E  KL+      D S    +L++CC+  PE   +K      Q+ F   D+TS F D
Sbjct: 2543 RLEHEQNKLQMNTGTKDLSAYAENLASCCLSTPELLCQKSVFEGVQDTFPPADATSLFWD 2602

Query: 324  MELLKEFSSAILADGEELYKVXXXXXXXXXXXLKFSLKFSSRPPTDFIPHQTMLWALDAW 145
            MELLKE +S  L + E L++V           LKFSL FSSRPP  F PHQ +LW L+AW
Sbjct: 2603 MELLKELTSVPLDELEGLHQVVGRLSYLLDSALKFSLSFSSRPPQMFSPHQKILWTLNAW 2662

Query: 144  DSVDSVNTKIASSILEMWFNWHSLLWIHCPE 52
             S+D+VN KIAS +LEMWFNWH  LW   PE
Sbjct: 2663 TSMDAVNMKIASFVLEMWFNWHESLWACFPE 2693


>ref|XP_004141809.1| PREDICTED: midasin-like [Cucumis sativus]
          Length = 5062

 Score =  126 bits (317), Expect = 2e-27
 Identities = 71/172 (41%), Positives = 91/172 (52%), Gaps = 4/172 (2%)
 Frame = -1

Query: 504  RFEYETQKLEAVLMPSDQSFLENDLSACCVFCPEKFHKKLSLSSWQEMFCLFDSTSFFLD 325
            RF++E    + +L   D+   E     CC    + F  K     W +   + D TSFFLD
Sbjct: 2576 RFKHEKNNAKCILESKDRPIQEKMSFICCPSGCDIF-TKADPDVWLDTLPINDGTSFFLD 2634

Query: 324  MELLKEFSSAILADGEELYKVXXXXXXXXXXXLKFSLKFSSRPPTDFIPHQTMLWALDAW 145
            M LL+E SS +L D   L +            L+FSLKFSSRPP  FI HQ +LW LD  
Sbjct: 2635 MLLLQELSSILLVDRGSLKQALYGLSNLMKETLQFSLKFSSRPPQTFIAHQNLLWTLDEC 2694

Query: 144  DSVDSVNTKIASSILEMWFNWHSLLWIHCPEPF----KVASCDSPLPYMLFQ 1
            DS+D+V  K A   LEMWF WH  LWIHCP+      KV    +P+P++L Q
Sbjct: 2695 DSMDTVRAKAAGFFLEMWFRWHQSLWIHCPDFVKNFTKVVDYRTPVPHVLVQ 2746


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