BLASTX nr result

ID: Coptis23_contig00018454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018454
         (1503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267589.1| PREDICTED: uncharacterized protein LOC100245...   115   3e-23
ref|XP_002512992.1| conserved hypothetical protein [Ricinus comm...   113   1e-22
ref|XP_002313761.1| predicted protein [Populus trichocarpa] gi|2...   104   5e-20
ref|XP_002305461.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-20
ref|XP_004148538.1| PREDICTED: uncharacterized protein LOC101213...    94   1e-16

>ref|XP_002267589.1| PREDICTED: uncharacterized protein LOC100245210 [Vitis vinifera]
           gi|297744730|emb|CBI37992.3| unnamed protein product
           [Vitis vinifera]
          Length = 260

 Score =  115 bits (288), Expect = 3e-23
 Identities = 83/235 (35%), Positives = 124/235 (52%), Gaps = 5/235 (2%)
 Frame = +3

Query: 51  MSVEDDQVWKDLLSSIV--SIDFTKSDVELSPEDAAWVDSCLVKDPELSDSSWNAMKDAL 224
           M+V DD + +  +SS++  S++ ++    LSPED AWVDSCL+KDPE+SDS WN++KDAL
Sbjct: 24  MAVGDDAMIEGSVSSLLLNSLESSQDAGSLSPEDVAWVDSCLIKDPEVSDSDWNSLKDAL 83

Query: 225 LDVVLSPENSQTYDTAVTENDGIPSGTVTDVLMS-EEAEMPQNPSGTKVDSDLTEGERVL 401
           L+++    N+    T+   N   PS    ++L S +EAE    P+       + E E   
Sbjct: 84  LEILNVQPNA--LGTSGAGNVVFPSRADMEMLPSNDEAENALLPTTDDYPIPINEVEENC 141

Query: 402 EEIDLNMVSXXXXXXXXQLQXXXXXXXXXXXXXXGIKAEVSLTNETEFPIDDIFKVWDLN 581
           ++I  N  +                               SL +E E   DDIFKVWDL 
Sbjct: 142 DDIPDNQKAHNFRSRAYLGNVFLPSYNEENQRESRNTDLSSLGDEIEPSTDDIFKVWDLE 201

Query: 582 TPVAEEDELVKQLEEALTESYLATQPLALENSGSDWDI--GTIDSLIAGLTDLSL 740
            P AEEDEL++QL +ALT+    + P + ++ G   D+    +D L++G+ DLSL
Sbjct: 202 IP-AEEDELIQQLNKALTDISSPSIPASFDDLGKWKDLKGELLDDLVSGIADLSL 255


>ref|XP_002512992.1| conserved hypothetical protein [Ricinus communis]
           gi|223548003|gb|EEF49495.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 250

 Score =  113 bits (282), Expect = 1e-22
 Identities = 79/245 (32%), Positives = 129/245 (52%), Gaps = 20/245 (8%)
 Frame = +3

Query: 66  DQVWKDLLSSIV--SIDFTKSDVELSPEDAAWVDSCLVKDPELSDSSWNAMKDALLDVVL 239
           D V +  +SS++  S+   ++D  LSPE+ AWVDSCLVKDP+ SD  W++MKDALLD++ 
Sbjct: 5   DDVAEGSISSVLIASLKSNQNDDALSPEEIAWVDSCLVKDPDTSDDDWSSMKDALLDIL- 63

Query: 240 SPENSQTYDTAVTENDGIPSGTVTDVLMSEEAEMPQNPSGTKVDSDLTEGERVLEEIDLN 419
               ++++++   E+DG+  G    +L S E  + ++P  +  D D  + ++ ++E + +
Sbjct: 64  -GLQAESHNSLAPESDGLSKGIDIQMLSSAEPGIVESPIRSS-DDDSIQTDKEMDESNYD 121

Query: 420 M---------VSXXXXXXXXQLQXXXXXXXXXXXXXXGIKAEV-------SLTNETEFPI 551
                     +S        +                 ++  +       S T ETE  I
Sbjct: 122 FPVKEEFGISLSEQSHCDASESSLKNAFLPHYRENNQNVEESIDSGLNFSSSTYETEPSI 181

Query: 552 DDIFKVWDLNTPVAEEDELVKQLEEALTESYLATQPLALENSGS--DWDIGTIDSLIAGL 725
            DIFKVWDL  P +EE E +KQL +AL+ES +   P   ++SG+  +    ++D LIAG+
Sbjct: 182 QDIFKVWDLGIP-SEEYEFIKQLNKALSESSVELMPPMTDDSGAWKESKDDSVDDLIAGI 240

Query: 726 TDLSL 740
             LSL
Sbjct: 241 AYLSL 245


>ref|XP_002313761.1| predicted protein [Populus trichocarpa] gi|222850169|gb|EEE87716.1|
           predicted protein [Populus trichocarpa]
          Length = 248

 Score =  104 bits (260), Expect = 5e-20
 Identities = 83/255 (32%), Positives = 133/255 (52%), Gaps = 25/255 (9%)
 Frame = +3

Query: 51  MSVEDDQVWKDLLSSIV-SIDFTKSDVELSPEDAAWVDSCLVKDPELSDSSWNAMKDALL 227
           M+  D+++ +  +SS+V S++  K+   LSPED AW DSCLVKD E+SD  W+++KD LL
Sbjct: 1   MNAGDNEMVEGSISSVVDSLESNKNGDALSPEDVAWADSCLVKDDEISDGDWSSLKDVLL 60

Query: 228 DVV-LSPENSQTYDTAVTENDGIPSGTVTDVLMSEEAEMPQNPSGTKVDSDL-------- 380
           +++ L PE   ++D++    D +P     DVLM    E  +  S   +D+++        
Sbjct: 61  EILSLQPE---SHDSSEPGTDDLP--RAADVLMLPSDEAVKLQSSVVIDNEVATINKELE 115

Query: 381 --TEGERVLEEIDLNMVSXXXXXXXXQLQXXXXXXXXXXXXXXGIKAEVSLTN------- 533
             ++G  + EE D++                               +++SL +       
Sbjct: 116 MKSKGFPINEETDVS----SSQLFQGDFSETSLKHAFSPNYKEDDDSKMSLPDGSGLDMA 171

Query: 534 ----ETEFPIDDIFKVWDLNTPVAEEDELVKQLEEALTESYLATQPLALENSG--SDWDI 695
               +TE   +DIFKVWDL  P  EEDELVKQL +AL+E+ + + P + ++SG   D   
Sbjct: 172 FSAYDTEPSTEDIFKVWDLGIP-DEEDELVKQLNKALSENPVHSTPPS-DDSGVLKDLKE 229

Query: 696 GTIDSLIAGLTDLSL 740
            ++DSLI G+ +LSL
Sbjct: 230 ESLDSLINGIAELSL 244


>ref|XP_002305461.1| predicted protein [Populus trichocarpa] gi|222848425|gb|EEE85972.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  104 bits (259), Expect = 7e-20
 Identities = 80/244 (32%), Positives = 129/244 (52%), Gaps = 14/244 (5%)
 Frame = +3

Query: 51  MSVEDDQVWKDLLSSIV--SIDFTKSDVELSPEDAAWVDSCLVKDPELSD-SSWNAMKDA 221
           M+  D ++ +  +SS++  S++  ++   LSPED AWVDSCLVKDPE+SD + W+++KD 
Sbjct: 1   MTAGDSEMVQGSISSVLVDSLESNENGDVLSPEDVAWVDSCLVKDPEISDGTDWSSLKDV 60

Query: 222 LLDVV-LSPENSQTYDTAVTENDGIPSGTVTDVLMSEEAEMPQNPSGTKVDSDLTE---- 386
           LL+++ L PE   ++D++   ND +P GT   + +S E E  Q+   T  + DL+E    
Sbjct: 61  LLEILSLQPE---SHDSSEPGNDDLPRGTDILMHLSNETENLQSRVVTDDEGDLSETSLE 117

Query: 387 ---GERVLEEIDLNMVSXXXXXXXXQLQXXXXXXXXXXXXXXGIKAEVSLT-NETEFPID 554
                   E+ D  M                           G   ++  T ++ E   +
Sbjct: 118 HAFSPNCKEDDDSTM-----------------------CLPAGSGLDMGFTASDIEPSTE 154

Query: 555 DIFKVWDLNTPVAEEDELVKQLEEALTESYLATQPLALENSGSDWDI--GTIDSLIAGLT 728
           DIFKVW       EEDEL+KQL +AL E+ + + P + ++SG+  D+   ++D+L  G+ 
Sbjct: 155 DIFKVWGSGME-DEEDELIKQLNKALAENPVQSTPSSSDDSGARKDLKEESLDTLTHGIA 213

Query: 729 DLSL 740
           DLSL
Sbjct: 214 DLSL 217


>ref|XP_004148538.1| PREDICTED: uncharacterized protein LOC101213547 [Cucumis sativus]
           gi|449519886|ref|XP_004166965.1| PREDICTED:
           uncharacterized LOC101213547 [Cucumis sativus]
          Length = 250

 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 73/228 (32%), Positives = 112/228 (49%), Gaps = 24/228 (10%)
 Frame = +3

Query: 132 LSPEDAAWVDSCLVKD-PELSDSSWNAMKDALLDVV-LSPENSQTYDTAVTENDGIP--S 299
           L+PED AWVDSCL+K+ P++SD +WN +KDALL+++ L P   Q +++++  +D +P  S
Sbjct: 23  LTPEDIAWVDSCLIKEVPDISDGNWNDIKDALLEIIDLYP---QGFESSLALSDNVPGAS 79

Query: 300 GTVTDVLMSEEAEMPQNPSGTKVDSDLTEGERVLEEI----DLNMVSXXXXXXXXQLQXX 467
               DV M     + +    ++   DL    R++ E     D  + S         +   
Sbjct: 80  NGDIDVDMLPSNNVKELTFSSRDSDDLMNETRMVPEDHPMNDTGIASEDPQMHHDDIDTS 139

Query: 468 XXXXXXXXXXXXGIKAEVSLTNE--------------TEFPIDDIFKVWDLNTPVAEEDE 605
                         K EV   +E              ++ PI++IF VWDLN P   EDE
Sbjct: 140 LPFTLVKNPFLPTYKEEVEGNDENNQAGIGHELSEIGSDSPINNIFHVWDLNFPPV-EDE 198

Query: 606 LVKQLEEALTESYLATQPLALENSGSDWDI--GTIDSLIAGLTDLSLQ 743
           LV+QL +ALTE+ +   P    N G   D+    +D LI  ++DLSL+
Sbjct: 199 LVEQLNKALTENSVELVPSMDSNLGVSKDLKEDLLDDLINSISDLSLE 246


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