BLASTX nr result

ID: Coptis23_contig00018445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018445
         (1328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ34618.1| unnamed protein product [Thellungiella halophila]     370   e-100
ref|XP_002884867.1| SYP121 [Arabidopsis lyrata subsp. lyrata] gi...   363   7e-98
ref|XP_002524068.1| syntaxin, putative [Ricinus communis] gi|223...   362   9e-98
ref|NP_187788.1| syntaxin-121 [Arabidopsis thaliana] gi|28380149...   360   3e-97
ref|XP_002263986.1| PREDICTED: syntaxin-121-like [Vitis vinifera]     360   6e-97

>dbj|BAJ34618.1| unnamed protein product [Thellungiella halophila]
          Length = 342

 Score =  370 bits (949), Expect = e-100
 Identities = 192/287 (66%), Positives = 221/287 (77%), Gaps = 5/287 (1%)
 Frame = +3

Query: 243  MNDLFSGSFSRFKSEPNNSPDNYNPKGGVQM-----SAMGANLDKFFEDVEGIKDXXXXX 407
            MNDLFS SFSRF+SEP+   D     GGVQM     S  G NLDKFFEDVE +K+     
Sbjct: 1    MNDLFSSSFSRFRSEPSPRRDGAGGGGGVQMAHPAGSTGGVNLDKFFEDVESVKEELKEL 60

Query: 408  XXXXXXXXXXXXXXKTIHNAKSIKDLRSKMDSDISXXXXXXXXIKVRLEALDRSNASNRT 587
                          KT+HNAK++KDLRSKMD+D+         IKV+LEALDRSNA+NR+
Sbjct: 61   DRLNETLQSCHEQSKTLHNAKAVKDLRSKMDADVGVALKKAKMIKVKLEALDRSNAANRS 120

Query: 588  QPGCGPGSSSDRTRTSVLNGLRKKLKDSMDGFNTLRQEIGSEYKETVKRRFFTITGESPD 767
             PGCGPGSSSDRTRTSVLNGLRKKLKDSMD FN LR+ I SEY+ETV+RR+FT+TGE+PD
Sbjct: 121  LPGCGPGSSSDRTRTSVLNGLRKKLKDSMDSFNRLRELISSEYRETVQRRYFTVTGENPD 180

Query: 768  DKTVEILISTGESESLLQKAIQEQGRGRVIDTISEIQERFDVVKDMEKSLLELHQVFLDM 947
            + T++ LISTGESE  LQKAIQEQGRGRV+DTI+EIQER D VKD+EK+L ELHQVFLDM
Sbjct: 181  EGTLDRLISTGESERFLQKAIQEQGRGRVLDTINEIQERHDAVKDIEKNLKELHQVFLDM 240

Query: 948  AVLVEVQGEQLDDIESQVGRASSFVNRGTEQLTTARRHQKSTRKWTC 1088
            AVLVE QG QLDDIES VGRASSF+  GT+QL T R +QK+TRKWTC
Sbjct: 241  AVLVEHQGAQLDDIESHVGRASSFIRGGTDQLQTVRVYQKNTRKWTC 287


>ref|XP_002884867.1| SYP121 [Arabidopsis lyrata subsp. lyrata] gi|297330707|gb|EFH61126.1|
            SYP121 [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score =  363 bits (931), Expect = 7e-98
 Identities = 189/287 (65%), Positives = 219/287 (76%), Gaps = 5/287 (1%)
 Frame = +3

Query: 243  MNDLFSGSFSRFKSEPNNSPDNYNPKGGVQM-----SAMGANLDKFFEDVEGIKDXXXXX 407
            MNDLFS SFSRF+ EP+   D      G+QM     S  G NLDKFFEDVE +K+     
Sbjct: 1    MNDLFSSSFSRFRGEPSPRRDAPGGGDGLQMANPAGSTGGVNLDKFFEDVESVKEELKEL 60

Query: 408  XXXXXXXXXXXXXXKTIHNAKSIKDLRSKMDSDISXXXXXXXXIKVRLEALDRSNASNRT 587
                          KT+HNAK++KDLRSKMD D+         IKV+LEALDR+NA+NR+
Sbjct: 61   DRLNETLSSCHEQSKTLHNAKAVKDLRSKMDGDVGVALKKAKMIKVKLEALDRANAANRS 120

Query: 588  QPGCGPGSSSDRTRTSVLNGLRKKLKDSMDGFNTLRQEIGSEYKETVKRRFFTITGESPD 767
             PGCGPGSSSDRTRTSVLNGLRKKLKDSMD FN LR+ I SEY+ETV+RR+FT+TGE+PD
Sbjct: 121  LPGCGPGSSSDRTRTSVLNGLRKKLKDSMDSFNRLRELISSEYRETVQRRYFTVTGENPD 180

Query: 768  DKTVEILISTGESESLLQKAIQEQGRGRVIDTISEIQERFDVVKDMEKSLLELHQVFLDM 947
            + T++ LISTGESE  LQKAIQEQGRGRV+DTI+EIQER D VKD+EK+L ELHQVFLDM
Sbjct: 181  EGTLDRLISTGESERFLQKAIQEQGRGRVLDTINEIQERHDAVKDIEKNLRELHQVFLDM 240

Query: 948  AVLVEVQGEQLDDIESQVGRASSFVNRGTEQLTTARRHQKSTRKWTC 1088
            AVLVE QG QLDDIES VGRASSF+  GT+QL TAR +QK+TRKWTC
Sbjct: 241  AVLVEHQGAQLDDIESHVGRASSFIRGGTDQLHTARVYQKNTRKWTC 287


>ref|XP_002524068.1| syntaxin, putative [Ricinus communis] gi|223536636|gb|EEF38278.1|
            syntaxin, putative [Ricinus communis]
          Length = 316

 Score =  362 bits (930), Expect = 9e-98
 Identities = 184/282 (65%), Positives = 225/282 (79%)
 Frame = +3

Query: 243  MNDLFSGSFSRFKSEPNNSPDNYNPKGGVQMSAMGANLDKFFEDVEGIKDXXXXXXXXXX 422
            MNDLFSGSFSRF++E   SPD++  +     S  G NLDKFFEDVE +KD          
Sbjct: 1    MNDLFSGSFSRFRNE-QGSPDHHVIQMTETPSTGGVNLDKFFEDVESVKDELKELERLNE 59

Query: 423  XXXXXXXXXKTIHNAKSIKDLRSKMDSDISXXXXXXXXIKVRLEALDRSNASNRTQPGCG 602
                     KT+HNAK++KDLRS+MD+D++        IKVRLEALDRSNA+NR+ PGCG
Sbjct: 60   SLQSAHEQSKTLHNAKTVKDLRSRMDADVAQALKKAKLIKVRLEALDRSNAANRSLPGCG 119

Query: 603  PGSSSDRTRTSVLNGLRKKLKDSMDGFNTLRQEIGSEYKETVKRRFFTITGESPDDKTVE 782
            PGSSSDRTRTSV+NGLRKKLKDSM+ F++LR++I +EY+ETV+RR++T+TGE+PD+KT++
Sbjct: 120  PGSSSDRTRTSVVNGLRKKLKDSMESFSSLREKISTEYRETVQRRYYTVTGENPDEKTLD 179

Query: 783  ILISTGESESLLQKAIQEQGRGRVIDTISEIQERFDVVKDMEKSLLELHQVFLDMAVLVE 962
             LISTGESE+ LQKAIQEQGRGR++DTI+EIQER D VK+MEK+L ELHQVFLDMAVLV+
Sbjct: 180  RLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKEMEKNLKELHQVFLDMAVLVQ 239

Query: 963  VQGEQLDDIESQVGRASSFVNRGTEQLTTARRHQKSTRKWTC 1088
             QGEQLDDIES + RASSFV  GT+QL TAR  QK+TRKWTC
Sbjct: 240  AQGEQLDDIESNMQRASSFVRGGTQQLQTARTLQKNTRKWTC 281


>ref|NP_187788.1| syntaxin-121 [Arabidopsis thaliana]
            gi|28380149|sp|Q9ZSD4.1|SY121_ARATH RecName:
            Full=Syntaxin-121; Short=AtSYP121; AltName:
            Full=Syntaxin-related protein At-Syr1
            gi|6671938|gb|AAF23198.1|AC016795_11 putative syntaxin
            [Arabidopsis thaliana] gi|4206789|gb|AAD11809.1|
            syntaxin-related protein At-SYR1 [Arabidopsis thaliana]
            gi|20260504|gb|AAM13150.1| putative syntaxin [Arabidopsis
            thaliana] gi|21593428|gb|AAM65395.1| putative syntaxin
            [Arabidopsis thaliana] gi|28059412|gb|AAO30056.1|
            putative syntaxin [Arabidopsis thaliana]
            gi|332641582|gb|AEE75103.1| syntaxin-121 [Arabidopsis
            thaliana]
          Length = 346

 Score =  360 bits (925), Expect = 3e-97
 Identities = 190/288 (65%), Positives = 220/288 (76%), Gaps = 6/288 (2%)
 Frame = +3

Query: 243  MNDLFSGSFSRFKS-EPNNSPDNYNPKGGVQM-----SAMGANLDKFFEDVEGIKDXXXX 404
            MNDLFS SFSRF+S EP+   D      GVQM     S  G NLDKFFEDVE +K+    
Sbjct: 1    MNDLFSSSFSRFRSGEPSPRRDVAGGGDGVQMANPAGSTGGVNLDKFFEDVESVKEELKE 60

Query: 405  XXXXXXXXXXXXXXXKTIHNAKSIKDLRSKMDSDISXXXXXXXXIKVRLEALDRSNASNR 584
                           KT+HNAK++KDLRSKMD D+         IKV+LEALDR+NA+NR
Sbjct: 61   LDRLNETLSSCHEQSKTLHNAKAVKDLRSKMDGDVGVALKKAKMIKVKLEALDRANAANR 120

Query: 585  TQPGCGPGSSSDRTRTSVLNGLRKKLKDSMDGFNTLRQEIGSEYKETVKRRFFTITGESP 764
            + PGCGPGSSSDRTRTSVLNGLRKKL DSMD FN LR+ I SEY+ETV+RR+FT+TGE+P
Sbjct: 121  SLPGCGPGSSSDRTRTSVLNGLRKKLMDSMDSFNRLRELISSEYRETVQRRYFTVTGENP 180

Query: 765  DDKTVEILISTGESESLLQKAIQEQGRGRVIDTISEIQERFDVVKDMEKSLLELHQVFLD 944
            D++T++ LISTGESE  LQKAIQEQGRGRV+DTI+EIQER D VKD+EK+L ELHQVFLD
Sbjct: 181  DERTLDRLISTGESERFLQKAIQEQGRGRVLDTINEIQERHDAVKDIEKNLRELHQVFLD 240

Query: 945  MAVLVEVQGEQLDDIESQVGRASSFVNRGTEQLTTARRHQKSTRKWTC 1088
            MAVLVE QG QLDDIES VGRASSF+  GT+QL TAR +QK+TRKWTC
Sbjct: 241  MAVLVEHQGAQLDDIESHVGRASSFIRGGTDQLQTARVYQKNTRKWTC 288


>ref|XP_002263986.1| PREDICTED: syntaxin-121-like [Vitis vinifera]
          Length = 324

 Score =  360 bits (923), Expect = 6e-97
 Identities = 185/284 (65%), Positives = 222/284 (78%), Gaps = 2/284 (0%)
 Frame = +3

Query: 243  MNDLFSGSFSRFKSEPNNSPDNYNPKGGVQM--SAMGANLDKFFEDVEGIKDXXXXXXXX 416
            MNDLFSGSFSRF+SE         P   V+M  S  G NLDKFFEDVE IK+        
Sbjct: 1    MNDLFSGSFSRFRSE--------EPPPSVEMTSSTAGVNLDKFFEDVESIKEELREMESL 52

Query: 417  XXXXXXXXXXXKTIHNAKSIKDLRSKMDSDISXXXXXXXXIKVRLEALDRSNASNRTQPG 596
                       KT+HNA S+K+LRS+MDS +S        IK+RLEALDRSNA+NR+ PG
Sbjct: 53   QQKLHDAHEQSKTLHNANSVKELRSRMDSHVSLALKKAKLIKLRLEALDRSNAANRSLPG 112

Query: 597  CGPGSSSDRTRTSVLNGLRKKLKDSMDGFNTLRQEIGSEYKETVKRRFFTITGESPDDKT 776
            CGPGSSSDRTRTSV+NGLRKKL+DSMD F ++R +I SEY+ETV+RR+FT+TGE+PD+KT
Sbjct: 113  CGPGSSSDRTRTSVVNGLRKKLRDSMDAFTSIRNQISSEYRETVQRRYFTVTGENPDEKT 172

Query: 777  VEILISTGESESLLQKAIQEQGRGRVIDTISEIQERFDVVKDMEKSLLELHQVFLDMAVL 956
            V++LISTGESE+ LQKAIQEQGRGRV+DTISEI+ER + VK++E++L ELHQVFLDMAVL
Sbjct: 173  VDLLISTGESETFLQKAIQEQGRGRVLDTISEIRERHESVKELERNLKELHQVFLDMAVL 232

Query: 957  VEVQGEQLDDIESQVGRASSFVNRGTEQLTTARRHQKSTRKWTC 1088
            V+ QGEQLDDIESQV RA+SFV  GT+QL TAR+HQ S+RKWTC
Sbjct: 233  VQAQGEQLDDIESQVARANSFVTGGTQQLQTARKHQISSRKWTC 276


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