BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018442
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002441098.1| hypothetical protein SORBIDRAFT_09g020390 [S...    60   2e-07
ref|XP_003589011.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    59   4e-07

>ref|XP_002441098.1| hypothetical protein SORBIDRAFT_09g020390 [Sorghum bicolor]
           gi|241946383|gb|EES19528.1| hypothetical protein
           SORBIDRAFT_09g020390 [Sorghum bicolor]
          Length = 424

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
 Frame = -3

Query: 422 AAH-VIPERLCFTYHILTTMSLVMNFANPKQNSTALCLFRSSPYLLSLCVTSVSSGQITL 246
           AAH ++P +L    + LT ++L ++  N K+ + A CLF+ +P L  + +  +  G    
Sbjct: 285 AAHGILPGKLSRLLNRLTEITLELDLGNLKEANAAHCLFQIAPNLRRMELQLMHRGYSA- 343

Query: 245 LDDDNIWEPIPDEEIIFAQLKNMVLNGFMGSQHEASFVQFVLKSAVMLHTIRITWDATVE 66
               N W+ I  ++ +F  L  +V+N F GS  E+ F++ +LK A +L + RI  +  ++
Sbjct: 344 -PTSNFWDSIDHQDCLFKNLYTVVMNNFTGSCAESGFLELLLKDATVLRSARIKDNNKLD 402

Query: 65  K 63
           K
Sbjct: 403 K 403


>ref|XP_003589011.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478059|gb|AES59262.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 528

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/110 (30%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
 Frame = -3

Query: 425 LAAHVIPERLCFTYHILTTMSLVMNFANPKQNSTALCLFRSSPYLLSLCVTSVSS--GQI 252
           LAA V+P +L      L+ +SL +NF N ++ S ALC+FRSSP L  L ++++ +    +
Sbjct: 293 LAAGVLPVKLPTPCINLSFLSLTINFDNMEEISAALCVFRSSPNLQKLKISALRAHVATV 352

Query: 251 TLLDDDNIWEPIPDEEIIFAQLKNMVLNGFMGSQHEASFVQFVLKSAVML 102
            L      WE I    ++  +++++ ++G  G+Q E + ++F+L  +++L
Sbjct: 353 PLTPATYCWEDISSRLVMPFRVRHVTIDGISGTQSELNLIRFLLLYSLVL 402