BLASTX nr result

ID: Coptis23_contig00018433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018433
         (1234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279636.1| PREDICTED: putative DNA-binding protein ESCA...   242   1e-61
ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCA...   231   2e-58
emb|CBI34813.3| unnamed protein product [Vitis vinifera]              227   4e-57
ref|XP_002511734.1| ESC, putative [Ricinus communis] gi|22354891...   227   4e-57
ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|2...   226   7e-57

>ref|XP_002279636.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
           gi|147867329|emb|CAN81187.1| hypothetical protein
           VITISV_029906 [Vitis vinifera]
           gi|296089162|emb|CBI38865.3| unnamed protein product
           [Vitis vinifera]
          Length = 300

 Score =  242 bits (618), Expect = 1e-61
 Identities = 127/211 (60%), Positives = 138/211 (65%)
 Frame = +1

Query: 1   CDVVDSVSAFARRRQRGICILSGSGTVTNVTLRQPAAPGAIVTLHGRFEILSLSGSFLPP 180
           CD++DS++ FARRRQRGICILSGSGTVTNVTLRQPA+PGA+VTLHGRFEILSLSGSFLPP
Sbjct: 120 CDIMDSLNTFARRRQRGICILSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPP 179

Query: 181 PAPPSATGLTIYXXXXXXXXXXXXXXXXXXXXXPVVIMAASFGNAAYERLPLEDEEPQLP 360
           PAPP+A+GLTIY                     PVVIMAASFGNAAYERLPLEDEEPQ+P
Sbjct: 180 PAPPAASGLTIYLAGGQGQVVGGSVVGPLLASGPVVIMAASFGNAAYERLPLEDEEPQVP 239

Query: 361 MQSGGPLDSPGMVGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMSDP 540
           +   GPL SPGMVG                                         L+ DP
Sbjct: 240 IPGSGPLGSPGMVGQ------------------------------QPQQQQQQQQLLPDP 269

Query: 541 NAPLFQGLPPNLLNSCQLPTEAYWATGRSPY 633
           NA LFQGLPPNLLNSCQLP EAYW T R PY
Sbjct: 270 NASLFQGLPPNLLNSCQLPAEAYWGTARPPY 300


>ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Vitis
           vinifera]
          Length = 302

 Score =  231 bits (590), Expect = 2e-58
 Identities = 125/211 (59%), Positives = 137/211 (64%)
 Frame = +1

Query: 1   CDVVDSVSAFARRRQRGICILSGSGTVTNVTLRQPAAPGAIVTLHGRFEILSLSGSFLPP 180
           CD+V+SV+ FARRRQRG+CI+SG+GTVTNVTLRQPA+PGAIVTLHGRFEILSLSGSFLPP
Sbjct: 120 CDIVESVATFARRRQRGVCIMSGTGTVTNVTLRQPASPGAIVTLHGRFEILSLSGSFLPP 179

Query: 181 PAPPSATGLTIYXXXXXXXXXXXXXXXXXXXXXPVVIMAASFGNAAYERLPLEDEEPQLP 360
           PAPP+ATGLTIY                     PVVIMAASF NAAYERLPLE+E+P LP
Sbjct: 180 PAPPAATGLTIYLAGGQGQVVGGSVVGQLLASGPVVIMAASFSNAAYERLPLEEEDPALP 239

Query: 361 MQSGGPLDSPGMVGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMSDP 540
           M  GG L SPG VG                                         L++DP
Sbjct: 240 M-PGGSLGSPGGVGQ---------------------------HQPPQQQPQQPQQLLADP 271

Query: 541 NAPLFQGLPPNLLNSCQLPTEAYWATGRSPY 633
           NAPLF GLPPNLLNS QLP EAYWATGR PY
Sbjct: 272 NAPLFHGLPPNLLNSIQLPAEAYWATGRPPY 302


>emb|CBI34813.3| unnamed protein product [Vitis vinifera]
          Length = 240

 Score =  227 bits (579), Expect = 4e-57
 Identities = 123/211 (58%), Positives = 135/211 (63%)
 Frame = +1

Query: 1   CDVVDSVSAFARRRQRGICILSGSGTVTNVTLRQPAAPGAIVTLHGRFEILSLSGSFLPP 180
           CD+V+SV+ FARRRQRG+CI+SG+GTVTNVTLRQPA+PGAIVTLHGRFEILSLSGSFLPP
Sbjct: 67  CDIVESVATFARRRQRGVCIMSGTGTVTNVTLRQPASPGAIVTLHGRFEILSLSGSFLPP 126

Query: 181 PAPPSATGLTIYXXXXXXXXXXXXXXXXXXXXXPVVIMAASFGNAAYERLPLEDEEPQLP 360
           PAPP+ATGLTIY                     PVVIMAASF NAAYERLPLE+E+P LP
Sbjct: 127 PAPPAATGLTIYLAGGQGQVVGGSVVGQLLASGPVVIMAASFSNAAYERLPLEEEDPALP 186

Query: 361 MQSGGPLDSPGMVGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMSDP 540
           M  GG L SPG                                            L++DP
Sbjct: 187 M-PGGSLGSPG------------------------------------GQPQQPQQLLADP 209

Query: 541 NAPLFQGLPPNLLNSCQLPTEAYWATGRSPY 633
           NAPLF GLPPNLLNS QLP EAYWATGR PY
Sbjct: 210 NAPLFHGLPPNLLNSIQLPAEAYWATGRPPY 240


>ref|XP_002511734.1| ESC, putative [Ricinus communis] gi|223548914|gb|EEF50403.1| ESC,
           putative [Ricinus communis]
          Length = 299

 Score =  227 bits (579), Expect = 4e-57
 Identities = 119/210 (56%), Positives = 135/210 (64%)
 Frame = +1

Query: 4   DVVDSVSAFARRRQRGICILSGSGTVTNVTLRQPAAPGAIVTLHGRFEILSLSGSFLPPP 183
           D+++SVS FARRRQRG+CILSG+GTVTNVTLRQPA+PGA+VTLHGRFEILSLSGSFLPPP
Sbjct: 122 DIMESVSTFARRRQRGVCILSGTGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPP 181

Query: 184 APPSATGLTIYXXXXXXXXXXXXXXXXXXXXXPVVIMAASFGNAAYERLPLEDEEPQLPM 363
           APP+A+GLTIY                     PVVIMAASFGNAAYERLPLE+++ Q+P+
Sbjct: 182 APPAASGLTIYLAGGQGQVVGGSVVGPLLASGPVVIMAASFGNAAYERLPLEEDDGQVPV 241

Query: 364 QSGGPLDSPGMVGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMSDPN 543
              GPLDSPG+VG                                         LM DPN
Sbjct: 242 PGSGPLDSPGVVGQ--------------------------------TQPQQPQQLMQDPN 269

Query: 544 APLFQGLPPNLLNSCQLPTEAYWATGRSPY 633
            PLFQGLPPNLLNS QLP EAYW   R P+
Sbjct: 270 PPLFQGLPPNLLNSVQLPAEAYWGAARPPF 299


>ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|222840972|gb|EEE78519.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  226 bits (577), Expect = 7e-57
 Identities = 121/211 (57%), Positives = 137/211 (64%)
 Frame = +1

Query: 1   CDVVDSVSAFARRRQRGICILSGSGTVTNVTLRQPAAPGAIVTLHGRFEILSLSGSFLPP 180
           CD+V+SV+ FARRRQRG+CI+SG+GTVTNVTLRQPA+PGAIVTLHGRFEILSL+GSFLPP
Sbjct: 125 CDIVESVATFARRRQRGVCIMSGTGTVTNVTLRQPASPGAIVTLHGRFEILSLAGSFLPP 184

Query: 181 PAPPSATGLTIYXXXXXXXXXXXXXXXXXXXXXPVVIMAASFGNAAYERLPLEDEEPQLP 360
           PAPP+ATGLTIY                     PVVIMAASF NAAYERLPLE+E+PQ+P
Sbjct: 185 PAPPAATGLTIYLAGGQGQVVGGSVVGTLTASGPVVIMAASFSNAAYERLPLEEEDPQMP 244

Query: 361 MQSGGPLDSPGMVGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMSDP 540
           MQ GG + SPG VG                                         +M++ 
Sbjct: 245 MQ-GGEMGSPGAVGQ-------------------------------QQQQPQQQQVMAEQ 272

Query: 541 NAPLFQGLPPNLLNSCQLPTEAYWATGRSPY 633
           NA LF GLPPNLLNS QLP EAYWATGR PY
Sbjct: 273 NAQLFHGLPPNLLNSIQLPAEAYWATGRPPY 303


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