BLASTX nr result

ID: Coptis23_contig00018426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018426
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46439.1| unknown [Medicago truncatula]                          105   5e-21
ref|XP_002267727.1| PREDICTED: uncharacterized protein LOC100247...   102   4e-20
ref|XP_003598224.1| hypothetical protein MTR_3g008630 [Medicago ...   100   1e-19
ref|XP_002300278.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002522144.1| conserved hypothetical protein [Ricinus comm...    96   3e-18

>gb|AFK46439.1| unknown [Medicago truncatula]
          Length = 131

 Score =  105 bits (261), Expect = 5e-21
 Identities = 55/101 (54%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
 Frame = -3

Query: 432 HPVLRKTELR--RRGLLLSVIFGSSTALAAQADDSRTALLQKYLKKSEEXXXXXXXXXXX 259
           +P LR T L   RRGL+LS +     A A Q  +SRT LLQKYLKK+EE           
Sbjct: 34  NPTLRSTNLEFGRRGLVLSTVIA---ATATQDPESRTLLLQKYLKKTEENKEKNDKERVD 90

Query: 258 DFYKRNYKDYFEFIKGSLEGKKEEQLTESEKGILEWLKTNK 136
            +YKRNYKDYFEF++G L+GK+E +L+E+EKGIL+WLK NK
Sbjct: 91  SYYKRNYKDYFEFVEGGLQGKEEGKLSEAEKGILDWLKANK 131


>ref|XP_002267727.1| PREDICTED: uncharacterized protein LOC100247999 [Vitis vinifera]
           gi|147827576|emb|CAN66219.1| hypothetical protein
           VITISV_024778 [Vitis vinifera]
           gi|296083029|emb|CBI22433.3| unnamed protein product
           [Vitis vinifera]
          Length = 119

 Score =  102 bits (253), Expect = 4e-20
 Identities = 59/96 (61%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
 Frame = -3

Query: 420 RKTEL-RRRGLLLSVIFGSSTALAAQADDSRTALLQKYLKKSEEXXXXXXXXXXXDFYKR 244
           R TE+ RR GLLLS     S   A+Q  DSRT LL+KYLKKSEE            FYKR
Sbjct: 31  RTTEIGRRSGLLLS-----SVLAASQVSDSRTELLKKYLKKSEENKAKNDKERLDSFYKR 85

Query: 243 NYKDYFEFIKGSLEGKKEEQLTESEKGILEWLKTNK 136
           NYKDYFEF++GSL GK  EQL+ESEKGIL+WLK NK
Sbjct: 86  NYKDYFEFVEGSLAGK--EQLSESEKGILDWLKKNK 119


>ref|XP_003598224.1| hypothetical protein MTR_3g008630 [Medicago truncatula]
           gi|355487272|gb|AES68475.1| hypothetical protein
           MTR_3g008630 [Medicago truncatula]
          Length = 124

 Score =  100 bits (249), Expect = 1e-19
 Identities = 54/101 (53%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
 Frame = -3

Query: 432 HPVLRKT--ELRRRGLLLSVIFGSSTALAAQADDSRTALLQKYLKKSEEXXXXXXXXXXX 259
           +P LR T  E  RRGL+LS++     A A Q  +SRT LLQKYLKK++E           
Sbjct: 27  NPTLRSTNMEFGRRGLVLSIVIA---ATATQDPESRTLLLQKYLKKTQENKEKNDKERVD 83

Query: 258 DFYKRNYKDYFEFIKGSLEGKKEEQLTESEKGILEWLKTNK 136
             YKRNYKDYFEFI+G L+ K+E +L+E+EKGIL+WLK NK
Sbjct: 84  SNYKRNYKDYFEFIEGGLQAKEEGKLSEAEKGILDWLKANK 124


>ref|XP_002300278.1| predicted protein [Populus trichocarpa] gi|222847536|gb|EEE85083.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/95 (52%), Positives = 64/95 (67%)
 Frame = -3

Query: 420 RKTELRRRGLLLSVIFGSSTALAAQADDSRTALLQKYLKKSEEXXXXXXXXXXXDFYKRN 241
           R  ++ RRG+LLS + G         +DSR  LL+KYLKKSE+            +YKRN
Sbjct: 46  RAADIGRRGVLLSTVVG-----VYSVNDSRIELLKKYLKKSEDNKTKNDKERMDSYYKRN 100

Query: 240 YKDYFEFIKGSLEGKKEEQLTESEKGILEWLKTNK 136
           YKDYF+F++GSL+GK E+ LTESEKGIL+WLK NK
Sbjct: 101 YKDYFDFVEGSLKGKNEQDLTESEKGILDWLKKNK 135


>ref|XP_002522144.1| conserved hypothetical protein [Ricinus communis]
           gi|223538743|gb|EEF40344.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 135

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/89 (53%), Positives = 60/89 (67%)
 Frame = -3

Query: 402 RRGLLLSVIFGSSTALAAQADDSRTALLQKYLKKSEEXXXXXXXXXXXDFYKRNYKDYFE 223
           RRG+LLS +       A   +DS+T LL+KYLKKSEE            +YKRNYKDYF+
Sbjct: 52  RRGILLSALVA-----AYPVNDSKTELLKKYLKKSEENRTKNDKERLDSYYKRNYKDYFD 106

Query: 222 FIKGSLEGKKEEQLTESEKGILEWLKTNK 136
            ++G L GKKE+ L+ESEKGIL+WLK NK
Sbjct: 107 LVEGGLRGKKEQDLSESEKGILDWLKNNK 135


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