BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018422
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133834.1| PREDICTED: tubulin gamma-2 chain-like [Cucum...   348   3e-94
ref|XP_002276643.1| PREDICTED: tubulin gamma-1 chain [Vitis vini...   346   2e-93
ref|XP_002320847.1| tubulin gamma-1 chain, at3g61650-like protei...   343   1e-92
ref|XP_002302616.1| tubulin gamma-2 chain [Populus trichocarpa] ...   339   1e-91
ref|NP_191724.1| tubulin gamma-1 chain [Arabidopsis thaliana] gi...   338   3e-91

>ref|XP_004133834.1| PREDICTED: tubulin gamma-2 chain-like [Cucumis sativus]
           gi|449480269|ref|XP_004155846.1| PREDICTED: tubulin
           gamma-2 chain-like [Cucumis sativus]
          Length = 474

 Score =  348 bits (893), Expect = 3e-94
 Identities = 174/178 (97%), Positives = 176/178 (98%)
 Frame = +2

Query: 2   LLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPA 181
           LLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPA
Sbjct: 297 LLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPA 356

Query: 182 SIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMF 361
           SIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMF
Sbjct: 357 SIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMF 416

Query: 362 ADNDLSEFDESREIIESLVDEYKACESPDYIKWGMEDPDRALTGEGNASGTVDPSLAV 535
           ADNDLSEFDESR+IIESLVDEYKACESPDYIKWGMEDPD+ LTGEGNASGT DPSLAV
Sbjct: 417 ADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPDQILTGEGNASGTADPSLAV 474


>ref|XP_002276643.1| PREDICTED: tubulin gamma-1 chain [Vitis vinifera]
           gi|297745396|emb|CBI40476.3| unnamed protein product
           [Vitis vinifera]
          Length = 474

 Score =  346 bits (887), Expect = 2e-93
 Identities = 173/178 (97%), Positives = 174/178 (97%)
 Frame = +2

Query: 2   LLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPA 181
           LLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPA
Sbjct: 297 LLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPA 356

Query: 182 SIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMF 361
           SIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMF
Sbjct: 357 SIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMF 416

Query: 362 ADNDLSEFDESREIIESLVDEYKACESPDYIKWGMEDPDRALTGEGNASGTVDPSLAV 535
           ADNDLSEFDESR+IIESLVDEYKACESPDYIKWGMEDPD  LTGEGNASG VDP LAV
Sbjct: 417 ADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPDHILTGEGNASGAVDPKLAV 474


>ref|XP_002320847.1| tubulin gamma-1 chain, at3g61650-like protein [Populus trichocarpa]
           gi|222861620|gb|EEE99162.1| tubulin gamma-1 chain,
           at3g61650-like protein [Populus trichocarpa]
          Length = 474

 Score =  343 bits (879), Expect = 1e-92
 Identities = 171/178 (96%), Positives = 173/178 (97%)
 Frame = +2

Query: 2   LLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPA 181
           LLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPA
Sbjct: 297 LLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPA 356

Query: 182 SIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMF 361
           SIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMF
Sbjct: 357 SIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMF 416

Query: 362 ADNDLSEFDESREIIESLVDEYKACESPDYIKWGMEDPDRALTGEGNASGTVDPSLAV 535
           ADNDLSEFDESR+IIESLVDEYKACESPDYIKWGMEDPD  LT EGNA GTVDP LA+
Sbjct: 417 ADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPDNLLTEEGNAKGTVDPKLAI 474


>ref|XP_002302616.1| tubulin gamma-2 chain [Populus trichocarpa]
           gi|222844342|gb|EEE81889.1| tubulin gamma-2 chain
           [Populus trichocarpa]
          Length = 474

 Score =  339 bits (870), Expect = 1e-91
 Identities = 169/178 (94%), Positives = 172/178 (96%)
 Frame = +2

Query: 2   LLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPA 181
           LLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPA
Sbjct: 297 LLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPA 356

Query: 182 SIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMF 361
           SIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMF
Sbjct: 357 SIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMF 416

Query: 362 ADNDLSEFDESREIIESLVDEYKACESPDYIKWGMEDPDRALTGEGNASGTVDPSLAV 535
           ADNDLSEFDESR+IIESLVDEYKACESPDYIKWGMEDP+  LT EGNA GT DP LA+
Sbjct: 417 ADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPNNLLTEEGNAKGTADPKLAI 474


>ref|NP_191724.1| tubulin gamma-1 chain [Arabidopsis thaliana]
           gi|297821024|ref|XP_002878395.1| gamma-tubulin
           [Arabidopsis lyrata subsp. lyrata]
           gi|586079|sp|P38557.1|TBG1_ARATH RecName: Full=Tubulin
           gamma-1 chain; AltName: Full=Gamma-1-tubulin
           gi|460089|gb|AAA20653.1| g1-tubulin [Arabidopsis
           thaliana] gi|6850856|emb|CAB71095.1| TUBULIN GAMMA-1
           CHAIN [Arabidopsis thaliana] gi|297324233|gb|EFH54654.1|
           gamma-tubulin [Arabidopsis lyrata subsp. lyrata]
           gi|332646715|gb|AEE80236.1| tubulin gamma-1 chain
           [Arabidopsis thaliana]
          Length = 474

 Score =  338 bits (867), Expect = 3e-91
 Identities = 167/177 (94%), Positives = 173/177 (97%)
 Frame = +2

Query: 2   LLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPA 181
           LLQTKNIMVSSYAR KEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPA
Sbjct: 297 LLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPA 356

Query: 182 SIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMF 361
           SIQVALS+KSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQY+KLRKKQAFLDNYRKFPMF
Sbjct: 357 SIQVALSKKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYDKLRKKQAFLDNYRKFPMF 416

Query: 362 ADNDLSEFDESREIIESLVDEYKACESPDYIKWGMEDPDRALTGEGNASGTVDPSLA 532
           ADNDLSEFDESR+IIESLVDEYKACESPDYIKWGMEDP++ +TGEGNASG VDP LA
Sbjct: 417 ADNDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPEQLMTGEGNASGVVDPKLA 473