BLASTX nr result

ID: Coptis23_contig00018420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018420
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278428.2| PREDICTED: disease resistance protein At4g27...    60   2e-07
emb|CBI26623.3| unnamed protein product [Vitis vinifera]               60   2e-07
emb|CAX28554.1| NBS-LLR resistance protein [Gossypium arboreum]        55   8e-06
gb|AAO89149.1| NBS-type resistance protein [Gossypium barbadense]      55   8e-06

>ref|XP_002278428.2| PREDICTED: disease resistance protein At4g27190-like [Vitis
           vinifera]
          Length = 1144

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/71 (47%), Positives = 42/71 (59%)
 Frame = -1

Query: 217 KTMLMQAIMAQVKKEKLFDEFASVVVSQKPDLEKIQDAIAXXXXXXXXXXXLSTRAAELR 38
           KT L++ +  +VKK+KLFDE A  VVSQ PDL KIQD IA              RA  LR
Sbjct: 183 KTTLVKEVGKKVKKDKLFDEVAIAVVSQAPDLIKIQDEIADALGLEFHEEKEIGRAGRLR 242

Query: 37  ERLNQERKTLL 5
           ERL  E++ L+
Sbjct: 243 ERLKTEKRVLV 253


>emb|CBI26623.3| unnamed protein product [Vitis vinifera]
          Length = 1940

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/71 (47%), Positives = 42/71 (59%)
 Frame = -1

Query: 217 KTMLMQAIMAQVKKEKLFDEFASVVVSQKPDLEKIQDAIAXXXXXXXXXXXLSTRAAELR 38
           KT L++ +  +VKK+KLFDE A  VVSQ PDL KIQD IA              RA  LR
Sbjct: 6   KTTLVKEVGKKVKKDKLFDEVAIAVVSQAPDLIKIQDEIADALGLEFHEEKEIGRAGRLR 65

Query: 37  ERLNQERKTLL 5
           ERL  E++ L+
Sbjct: 66  ERLKTEKRVLV 76


>emb|CAX28554.1| NBS-LLR resistance protein [Gossypium arboreum]
          Length = 170

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/71 (40%), Positives = 43/71 (60%)
 Frame = -1

Query: 217 KTMLMQAIMAQVKKEKLFDEFASVVVSQKPDLEKIQDAIAXXXXXXXXXXXLSTRAAELR 38
           KT L++ ++ QVK++KLFD     VV+  PD+ KIQD IA           +S RA+ L 
Sbjct: 7   KTTLVKEVIRQVKEDKLFDSAVMAVVTHTPDVRKIQDQIADMLGLKFEEQSMSGRASRLC 66

Query: 37  ERLNQERKTLL 5
           +RL +E+K L+
Sbjct: 67  QRLKKEKKILV 77


>gb|AAO89149.1| NBS-type resistance protein [Gossypium barbadense]
          Length = 166

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/71 (39%), Positives = 44/71 (61%)
 Frame = -1

Query: 217 KTMLMQAIMAQVKKEKLFDEFASVVVSQKPDLEKIQDAIAXXXXXXXXXXXLSTRAAELR 38
           KT L++ ++ QVK++KLFD     VV+  PD++ IQD IA           ++ RA+ L 
Sbjct: 4   KTTLVKEVVRQVKEDKLFDSVVMAVVTPTPDIKNIQDQIADTLGLTFKEPSMNGRASRLC 63

Query: 37  ERLNQERKTLL 5
           +RL +E+KTL+
Sbjct: 64  QRLKKEKKTLV 74


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