BLASTX nr result

ID: Coptis23_contig00018419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018419
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522480.1| conserved hypothetical protein [Ricinus comm...    76   2e-12
ref|XP_003613885.1| DUF246 domain-containing protein [Medicago t...    75   5e-12
ref|XP_004155302.1| PREDICTED: LOW QUALITY PROTEIN: DUF246 domai...    73   2e-11
ref|XP_004135163.1| PREDICTED: DUF246 domain-containing protein ...    73   2e-11
gb|AAF79406.1|AC068197_16 F16A14.24 [Arabidopsis thaliana]             72   5e-11

>ref|XP_002522480.1| conserved hypothetical protein [Ricinus communis]
           gi|223538365|gb|EEF39972.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 520

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/76 (52%), Positives = 49/76 (64%)
 Frame = +2

Query: 2   WDEFEVAVRLAHHKRLGMPSLRKVILDKPKEEEYFYANPHECLSEAKL*GVYKSGSNSHQ 181
           W++F VAV+ AH KR+G PS RKVI DKPKEE+YFYANP ECL E          +NS  
Sbjct: 445 WNKFAVAVQAAHEKRMGQPSRRKVIADKPKEEDYFYANPQECLCEGTNCDDLLGPNNSSS 504

Query: 182 IEGWWLQKQKATKAQL 229
                LQ+Q+ TK +L
Sbjct: 505 -----LQRQQNTKRRL 515


>ref|XP_003613885.1| DUF246 domain-containing protein [Medicago truncatula]
           gi|355515220|gb|AES96843.1| DUF246 domain-containing
           protein [Medicago truncatula]
          Length = 494

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 33/61 (54%), Positives = 41/61 (67%)
 Frame = +2

Query: 2   WDEFEVAVRLAHHKRLGMPSLRKVILDKPKEEEYFYANPHECLSEAKL*GVYKSGSNSHQ 181
           W EF   V+  H KR+G P+ RKVI+DKPKEE+YFYANPHECL E +    +    NS Q
Sbjct: 434 WHEFADGVKQVHEKRIGQPTQRKVIIDKPKEEDYFYANPHECLCEERNCDAFLGHHNSSQ 493

Query: 182 I 184
           +
Sbjct: 494 V 494


>ref|XP_004155302.1| PREDICTED: LOW QUALITY PROTEIN: DUF246 domain-containing protein
           At1g04910-like [Cucumis sativus]
          Length = 503

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/61 (55%), Positives = 40/61 (65%)
 Frame = +2

Query: 2   WDEFEVAVRLAHHKRLGMPSLRKVILDKPKEEEYFYANPHECLSEAKL*GVYKSGSNSHQ 181
           WD+F  AVRLAH KR G P  R+ I DKPKEE+YFYANPHEC  E        S +NS +
Sbjct: 442 WDDFAAAVRLAHEKRQGQPMQRRAIPDKPKEEDYFYANPHECFCEGMNCNDSLSHNNSSK 501

Query: 182 I 184
           +
Sbjct: 502 V 502


>ref|XP_004135163.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis
           sativus]
          Length = 503

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/61 (55%), Positives = 40/61 (65%)
 Frame = +2

Query: 2   WDEFEVAVRLAHHKRLGMPSLRKVILDKPKEEEYFYANPHECLSEAKL*GVYKSGSNSHQ 181
           WD+F  AVRLAH KR G P  R+ I DKPKEE+YFYANPHEC  E        S +NS +
Sbjct: 442 WDDFAAAVRLAHEKRQGQPMQRRAIPDKPKEEDYFYANPHECFCEGMNCNDSLSHNNSSK 501

Query: 182 I 184
           +
Sbjct: 502 V 502


>gb|AAF79406.1|AC068197_16 F16A14.24 [Arabidopsis thaliana]
          Length = 507

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/63 (53%), Positives = 42/63 (66%)
 Frame = +2

Query: 2   WDEFEVAVRLAHHKRLGMPSLRKVILDKPKEEEYFYANPHECLSEAKL*GVYKSGSNSHQ 181
           WD+F VAV+ AH +R G P+ R+VI DKPKEE+YFYANP ECL E         G+N H 
Sbjct: 448 WDQFAVAVKEAHERRAGAPTHRRVISDKPKEEDYFYANPQECLCE---------GTNCHD 498

Query: 182 IEG 190
           + G
Sbjct: 499 LFG 501


Top