BLASTX nr result
ID: Coptis23_contig00018419
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00018419 (461 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002522480.1| conserved hypothetical protein [Ricinus comm... 76 2e-12 ref|XP_003613885.1| DUF246 domain-containing protein [Medicago t... 75 5e-12 ref|XP_004155302.1| PREDICTED: LOW QUALITY PROTEIN: DUF246 domai... 73 2e-11 ref|XP_004135163.1| PREDICTED: DUF246 domain-containing protein ... 73 2e-11 gb|AAF79406.1|AC068197_16 F16A14.24 [Arabidopsis thaliana] 72 5e-11 >ref|XP_002522480.1| conserved hypothetical protein [Ricinus communis] gi|223538365|gb|EEF39972.1| conserved hypothetical protein [Ricinus communis] Length = 520 Score = 76.3 bits (186), Expect = 2e-12 Identities = 40/76 (52%), Positives = 49/76 (64%) Frame = +2 Query: 2 WDEFEVAVRLAHHKRLGMPSLRKVILDKPKEEEYFYANPHECLSEAKL*GVYKSGSNSHQ 181 W++F VAV+ AH KR+G PS RKVI DKPKEE+YFYANP ECL E +NS Sbjct: 445 WNKFAVAVQAAHEKRMGQPSRRKVIADKPKEEDYFYANPQECLCEGTNCDDLLGPNNSSS 504 Query: 182 IEGWWLQKQKATKAQL 229 LQ+Q+ TK +L Sbjct: 505 -----LQRQQNTKRRL 515 >ref|XP_003613885.1| DUF246 domain-containing protein [Medicago truncatula] gi|355515220|gb|AES96843.1| DUF246 domain-containing protein [Medicago truncatula] Length = 494 Score = 75.1 bits (183), Expect = 5e-12 Identities = 33/61 (54%), Positives = 41/61 (67%) Frame = +2 Query: 2 WDEFEVAVRLAHHKRLGMPSLRKVILDKPKEEEYFYANPHECLSEAKL*GVYKSGSNSHQ 181 W EF V+ H KR+G P+ RKVI+DKPKEE+YFYANPHECL E + + NS Q Sbjct: 434 WHEFADGVKQVHEKRIGQPTQRKVIIDKPKEEDYFYANPHECLCEERNCDAFLGHHNSSQ 493 Query: 182 I 184 + Sbjct: 494 V 494 >ref|XP_004155302.1| PREDICTED: LOW QUALITY PROTEIN: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] Length = 503 Score = 73.2 bits (178), Expect = 2e-11 Identities = 34/61 (55%), Positives = 40/61 (65%) Frame = +2 Query: 2 WDEFEVAVRLAHHKRLGMPSLRKVILDKPKEEEYFYANPHECLSEAKL*GVYKSGSNSHQ 181 WD+F AVRLAH KR G P R+ I DKPKEE+YFYANPHEC E S +NS + Sbjct: 442 WDDFAAAVRLAHEKRQGQPMQRRAIPDKPKEEDYFYANPHECFCEGMNCNDSLSHNNSSK 501 Query: 182 I 184 + Sbjct: 502 V 502 >ref|XP_004135163.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] Length = 503 Score = 73.2 bits (178), Expect = 2e-11 Identities = 34/61 (55%), Positives = 40/61 (65%) Frame = +2 Query: 2 WDEFEVAVRLAHHKRLGMPSLRKVILDKPKEEEYFYANPHECLSEAKL*GVYKSGSNSHQ 181 WD+F AVRLAH KR G P R+ I DKPKEE+YFYANPHEC E S +NS + Sbjct: 442 WDDFAAAVRLAHEKRQGQPMQRRAIPDKPKEEDYFYANPHECFCEGMNCNDSLSHNNSSK 501 Query: 182 I 184 + Sbjct: 502 V 502 >gb|AAF79406.1|AC068197_16 F16A14.24 [Arabidopsis thaliana] Length = 507 Score = 72.0 bits (175), Expect = 5e-11 Identities = 34/63 (53%), Positives = 42/63 (66%) Frame = +2 Query: 2 WDEFEVAVRLAHHKRLGMPSLRKVILDKPKEEEYFYANPHECLSEAKL*GVYKSGSNSHQ 181 WD+F VAV+ AH +R G P+ R+VI DKPKEE+YFYANP ECL E G+N H Sbjct: 448 WDQFAVAVKEAHERRAGAPTHRRVISDKPKEEDYFYANPQECLCE---------GTNCHD 498 Query: 182 IEG 190 + G Sbjct: 499 LFG 501