BLASTX nr result

ID: Coptis23_contig00018410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018410
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332026.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_002263591.2| PREDICTED: myosin-H heavy chain-like [Vitis ...   104   7e-21
emb|CBI35200.3| unnamed protein product [Vitis vinifera]              104   7e-21
emb|CAN71597.1| hypothetical protein VITISV_019007 [Vitis vinifera]   104   7e-21
ref|XP_003555574.1| PREDICTED: myosin-Vc-like [Glycine max]           102   2e-20

>ref|XP_002332026.1| predicted protein [Populus trichocarpa] gi|222875251|gb|EEF12382.1|
            predicted protein [Populus trichocarpa]
          Length = 1378

 Score =  105 bits (261), Expect = 5e-21
 Identities = 54/68 (79%), Positives = 57/68 (83%)
 Frame = -1

Query: 204  VISNMRVLMTEDSNNAVXXXXXXXXXXSIPFSVDDISKSMEQIDISDIEPPPLIRENSGF 25
            VISNMRVLMTEDSNNAV          SIPFSVDD+SKSMEQIDI+DIEPPPLIRENSGF
Sbjct: 1311 VISNMRVLMTEDSNNAVSSSFLLDDDSSIPFSVDDLSKSMEQIDIADIEPPPLIRENSGF 1370

Query: 24   MFLLPRVE 1
             FLLPR+E
Sbjct: 1371 SFLLPRIE 1378


>ref|XP_002263591.2| PREDICTED: myosin-H heavy chain-like [Vitis vinifera]
          Length = 1567

 Score =  104 bits (260), Expect = 7e-21
 Identities = 55/68 (80%), Positives = 56/68 (82%)
 Frame = -1

Query: 204  VISNMRVLMTEDSNNAVXXXXXXXXXXSIPFSVDDISKSMEQIDISDIEPPPLIRENSGF 25
            VISNMRVLMTEDSNNAV          SIPFSVDDISKSMEQIDISDIEPPPLIRENSGF
Sbjct: 1500 VISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDISDIEPPPLIRENSGF 1559

Query: 24   MFLLPRVE 1
             FLLPR +
Sbjct: 1560 SFLLPRAD 1567


>emb|CBI35200.3| unnamed protein product [Vitis vinifera]
          Length = 1630

 Score =  104 bits (260), Expect = 7e-21
 Identities = 55/68 (80%), Positives = 56/68 (82%)
 Frame = -1

Query: 204  VISNMRVLMTEDSNNAVXXXXXXXXXXSIPFSVDDISKSMEQIDISDIEPPPLIRENSGF 25
            VISNMRVLMTEDSNNAV          SIPFSVDDISKSMEQIDISDIEPPPLIRENSGF
Sbjct: 1563 VISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDISDIEPPPLIRENSGF 1622

Query: 24   MFLLPRVE 1
             FLLPR +
Sbjct: 1623 SFLLPRAD 1630


>emb|CAN71597.1| hypothetical protein VITISV_019007 [Vitis vinifera]
          Length = 1594

 Score =  104 bits (260), Expect = 7e-21
 Identities = 55/68 (80%), Positives = 56/68 (82%)
 Frame = -1

Query: 204  VISNMRVLMTEDSNNAVXXXXXXXXXXSIPFSVDDISKSMEQIDISDIEPPPLIRENSGF 25
            VISNMRVLMTEDSNNAV          SIPFSVDDISKSMEQIDISDIEPPPLIRENSGF
Sbjct: 1527 VISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDISDIEPPPLIRENSGF 1586

Query: 24   MFLLPRVE 1
             FLLPR +
Sbjct: 1587 SFLLPRAD 1594


>ref|XP_003555574.1| PREDICTED: myosin-Vc-like [Glycine max]
          Length = 1537

 Score =  102 bits (255), Expect = 2e-20
 Identities = 54/66 (81%), Positives = 55/66 (83%)
 Frame = -1

Query: 204  VISNMRVLMTEDSNNAVXXXXXXXXXXSIPFSVDDISKSMEQIDISDIEPPPLIRENSGF 25
            VISNMRVLMTEDSNNAV          SIPFSVDDISKSMEQIDI+DIEPPPLIRENSGF
Sbjct: 1470 VISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDIADIEPPPLIRENSGF 1529

Query: 24   MFLLPR 7
             FLLPR
Sbjct: 1530 SFLLPR 1535


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