BLASTX nr result

ID: Coptis23_contig00018407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018407
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33594.1| unknown [Medicago truncatula]                          144   8e-33
ref|XP_003626067.1| Bifunctional aminoacyl-tRNA synthetase [Medi...   144   8e-33
ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus co...   143   2e-32
ref|XP_002445753.1| hypothetical protein SORBIDRAFT_07g025100 [S...   142   3e-32
ref|XP_003554576.1| PREDICTED: bifunctional aminoacyl-tRNA synth...   140   8e-32

>gb|AFK33594.1| unknown [Medicago truncatula]
          Length = 529

 Score =  144 bits (363), Expect = 8e-33
 Identities = 67/85 (78%), Positives = 77/85 (90%)
 Frame = +3

Query: 3   QQSLFDVAKQKRDACIKVSKTWEEFTTALNDKKMILAPWCDEEEVEIDVKARTEGESGAA 182
           QQ+LFDVAK KRDACI++  TW+EF  ALN+KKMILAPWCDEEEVE DVKART+GE+GAA
Sbjct: 435 QQNLFDVAKHKRDACIQIIHTWDEFVAALNEKKMILAPWCDEEEVEKDVKARTKGETGAA 494

Query: 183 KTLCTPFEEDQPEMPEGTLCFASGK 257
           KTLC+PF  DQPE+PEGT+CFASGK
Sbjct: 495 KTLCSPF--DQPELPEGTVCFASGK 517


>ref|XP_003626067.1| Bifunctional aminoacyl-tRNA synthetase [Medicago truncatula]
           gi|355501082|gb|AES82285.1| Bifunctional aminoacyl-tRNA
           synthetase [Medicago truncatula]
          Length = 529

 Score =  144 bits (363), Expect = 8e-33
 Identities = 67/85 (78%), Positives = 77/85 (90%)
 Frame = +3

Query: 3   QQSLFDVAKQKRDACIKVSKTWEEFTTALNDKKMILAPWCDEEEVEIDVKARTEGESGAA 182
           QQ+LFDVAK KRDACI++  TW+EF  ALN+KKMILAPWCDEEEVE DVKART+GE+GAA
Sbjct: 435 QQNLFDVAKHKRDACIQIIHTWDEFVAALNEKKMILAPWCDEEEVEKDVKARTKGETGAA 494

Query: 183 KTLCTPFEEDQPEMPEGTLCFASGK 257
           KTLC+PF  DQPE+PEGT+CFASGK
Sbjct: 495 KTLCSPF--DQPELPEGTVCFASGK 517


>ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus communis]
           gi|223545660|gb|EEF47164.1| prolyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 501

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/85 (80%), Positives = 76/85 (89%)
 Frame = +3

Query: 3   QQSLFDVAKQKRDACIKVSKTWEEFTTALNDKKMILAPWCDEEEVEIDVKARTEGESGAA 182
           QQSLFD AKQKRDACI+V +TW+EFT AL+ +KMILAPWCDEEEVE DVK RT+GE GAA
Sbjct: 407 QQSLFDAAKQKRDACIQVVRTWDEFTEALSQRKMILAPWCDEEEVEEDVKQRTKGEMGAA 466

Query: 183 KTLCTPFEEDQPEMPEGTLCFASGK 257
           K+LCTPFE  QPE+PEGTLCFASGK
Sbjct: 467 KSLCTPFE--QPELPEGTLCFASGK 489


>ref|XP_002445753.1| hypothetical protein SORBIDRAFT_07g025100 [Sorghum bicolor]
           gi|241942103|gb|EES15248.1| hypothetical protein
           SORBIDRAFT_07g025100 [Sorghum bicolor]
          Length = 508

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/85 (77%), Positives = 78/85 (91%)
 Frame = +3

Query: 3   QQSLFDVAKQKRDACIKVSKTWEEFTTALNDKKMILAPWCDEEEVEIDVKARTEGESGAA 182
           Q++LF  A++KRDAC++V KTW+EFTTALN+K++ILAPWCDEEEVE DVKART+GE GAA
Sbjct: 414 QKNLFKTAQEKRDACVQVIKTWDEFTTALNNKRLILAPWCDEEEVEKDVKARTKGELGAA 473

Query: 183 KTLCTPFEEDQPEMPEGTLCFASGK 257
           KTLCTPFE  QPE+PEGTLCFASGK
Sbjct: 474 KTLCTPFE--QPELPEGTLCFASGK 496


>ref|XP_003554576.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase-like [Glycine
           max]
          Length = 515

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/85 (77%), Positives = 74/85 (87%)
 Frame = +3

Query: 3   QQSLFDVAKQKRDACIKVSKTWEEFTTALNDKKMILAPWCDEEEVEIDVKARTEGESGAA 182
           QQ+LFDVAKQKRD CI++  TW+EF  ALN +KMILAPWCDEEEVE DVKART+GE GAA
Sbjct: 421 QQNLFDVAKQKRDECIQIIHTWDEFVQALNQRKMILAPWCDEEEVEADVKARTKGEMGAA 480

Query: 183 KTLCTPFEEDQPEMPEGTLCFASGK 257
           KTLC+PF  DQPE+PEGT CFASGK
Sbjct: 481 KTLCSPF--DQPELPEGTKCFASGK 503


Top