BLASTX nr result

ID: Coptis23_contig00018405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018405
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523898.1| conserved hypothetical protein [Ricinus comm...   138   6e-31
emb|CBI31514.3| unnamed protein product [Vitis vinifera]              137   8e-31
ref|XP_002278274.1| PREDICTED: Golgi to ER traffic protein 4 hom...   137   8e-31
ref|NP_201127.2| uncharacterized protein [Arabidopsis thaliana] ...   132   2e-29
ref|XP_002866541.1| hypothetical protein ARALYDRAFT_496506 [Arab...   132   3e-29

>ref|XP_002523898.1| conserved hypothetical protein [Ricinus communis]
           gi|223536828|gb|EEF38467.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 324

 Score =  138 bits (347), Expect = 6e-31
 Identities = 64/87 (73%), Positives = 77/87 (88%)
 Frame = -3

Query: 529 LDELRKQVGSMQLELPRSDLIQFVIYLLQTLERDALPLFRMLRQNYKSSIDREPAFNELL 350
           +DE++KQV S +L+ P+SDLIQF+ YLL TL+RDA PLF MLR +YKSSIDREP FNELL
Sbjct: 238 MDEVKKQVESKKLDFPKSDLIQFITYLLPTLQRDAFPLFNMLRASYKSSIDREPVFNELL 297

Query: 349 DEISEKFYGVQRKNPLQGMFGDIFKMM 269
           DEI+EK YG+QR+NPLQGMFGDIFKM+
Sbjct: 298 DEIAEKLYGIQRRNPLQGMFGDIFKMI 324


>emb|CBI31514.3| unnamed protein product [Vitis vinifera]
          Length = 684

 Score =  137 bits (346), Expect = 8e-31
 Identities = 64/87 (73%), Positives = 78/87 (89%)
 Frame = -3

Query: 529 LDELRKQVGSMQLELPRSDLIQFVIYLLQTLERDALPLFRMLRQNYKSSIDREPAFNELL 350
           +DE++KQV S +L+ P SDL +F+ YLL TL+RDALPLF MLRQ+YKSSIDREPAFNELL
Sbjct: 597 MDEVKKQVESKELDYPESDLTEFIDYLLLTLQRDALPLFNMLRQSYKSSIDREPAFNELL 656

Query: 349 DEISEKFYGVQRKNPLQGMFGDIFKMM 269
           DEI+EKFYGV+R+NP+QGMFGD FK+M
Sbjct: 657 DEIAEKFYGVRRRNPMQGMFGDFFKLM 683


>ref|XP_002278274.1| PREDICTED: Golgi to ER traffic protein 4 homolog [Vitis vinifera]
          Length = 322

 Score =  137 bits (346), Expect = 8e-31
 Identities = 64/87 (73%), Positives = 78/87 (89%)
 Frame = -3

Query: 529 LDELRKQVGSMQLELPRSDLIQFVIYLLQTLERDALPLFRMLRQNYKSSIDREPAFNELL 350
           +DE++KQV S +L+ P SDL +F+ YLL TL+RDALPLF MLRQ+YKSSIDREPAFNELL
Sbjct: 235 MDEVKKQVESKELDYPESDLTEFIDYLLLTLQRDALPLFNMLRQSYKSSIDREPAFNELL 294

Query: 349 DEISEKFYGVQRKNPLQGMFGDIFKMM 269
           DEI+EKFYGV+R+NP+QGMFGD FK+M
Sbjct: 295 DEIAEKFYGVRRRNPMQGMFGDFFKLM 321


>ref|NP_201127.2| uncharacterized protein [Arabidopsis thaliana]
           gi|48958523|gb|AAT47814.1| At5g63220 [Arabidopsis
           thaliana] gi|51970596|dbj|BAD43990.1| putative protein
           [Arabidopsis thaliana] gi|332010336|gb|AED97719.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 324

 Score =  132 bits (333), Expect = 2e-29
 Identities = 64/88 (72%), Positives = 74/88 (84%)
 Frame = -3

Query: 529 LDELRKQVGSMQLELPRSDLIQFVIYLLQTLERDALPLFRMLRQNYKSSIDREPAFNELL 350
           +DE++KQ  +   EL  SDLIQF+ YLL+TL+RDALPLF MLR  YKSSIDR+   NELL
Sbjct: 237 MDEIKKQAETKNPELSESDLIQFISYLLETLQRDALPLFNMLRVKYKSSIDRDQLLNELL 296

Query: 349 DEISEKFYGVQRKNPLQGMFGDIFKMMG 266
           DEI+E+FYGVQRKNPLQGMFGDIFKMMG
Sbjct: 297 DEIAERFYGVQRKNPLQGMFGDIFKMMG 324


>ref|XP_002866541.1| hypothetical protein ARALYDRAFT_496506 [Arabidopsis lyrata subsp.
           lyrata] gi|297312376|gb|EFH42800.1| hypothetical protein
           ARALYDRAFT_496506 [Arabidopsis lyrata subsp. lyrata]
          Length = 324

 Score =  132 bits (332), Expect = 3e-29
 Identities = 64/88 (72%), Positives = 74/88 (84%)
 Frame = -3

Query: 529 LDELRKQVGSMQLELPRSDLIQFVIYLLQTLERDALPLFRMLRQNYKSSIDREPAFNELL 350
           +DE++KQ  +   EL  SDLIQF+ YLL+TL+RDALPLF MLR  YKSSIDR+   NELL
Sbjct: 237 MDEIKKQAETKYPELSESDLIQFISYLLETLQRDALPLFNMLRVKYKSSIDRDQLLNELL 296

Query: 349 DEISEKFYGVQRKNPLQGMFGDIFKMMG 266
           DEI+E+FYGVQRKNPLQGMFGDIFKMMG
Sbjct: 297 DEIAERFYGVQRKNPLQGMFGDIFKMMG 324


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