BLASTX nr result

ID: Coptis23_contig00018396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018396
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311011.1| predicted protein [Populus trichocarpa] gi|2...   248   8e-64
ref|XP_003525696.1| PREDICTED: argininosuccinate synthase, chlor...   247   1e-63
ref|XP_002315434.1| predicted protein [Populus trichocarpa] gi|2...   246   2e-63
ref|XP_002521168.1| argininosuccinate synthase, putative [Ricinu...   246   2e-63
ref|XP_003525699.1| PREDICTED: LOW QUALITY PROTEIN: argininosucc...   245   5e-63

>ref|XP_002311011.1| predicted protein [Populus trichocarpa] gi|222850831|gb|EEE88378.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  248 bits (632), Expect = 8e-64
 Identities = 125/137 (91%), Positives = 131/137 (95%)
 Frame = -3

Query: 622 LVGMKSRGVYETPGGTILFAAVQELESLTLDRETMQVKDTLALKYAELVYAGRWFDPLRE 443
           LVGMKSRGVYETPGGTILF AV+ELESLTLDRETMQVKD+LALKYAELVYAGRWFDPLRE
Sbjct: 334 LVGMKSRGVYETPGGTILFTAVRELESLTLDRETMQVKDSLALKYAELVYAGRWFDPLRE 393

Query: 442 SMDAFMEKITKDTTGSVKLKLYKGSVSVTGRTSPFSLYRQDISSFESGQIYDQADAAGFI 263
           SMDAFMEKIT+ T GSV+LKLYKGSVSV  RTSP SLYR+DISSFESGQIYDQADAAGFI
Sbjct: 394 SMDAFMEKITEKTNGSVRLKLYKGSVSVASRTSPNSLYREDISSFESGQIYDQADAAGFI 453

Query: 262 RLYGLPMRVRAMLEKGL 212
           RLYGLPMRVRAMLEKG+
Sbjct: 454 RLYGLPMRVRAMLEKGI 470


>ref|XP_003525696.1| PREDICTED: argininosuccinate synthase, chloroplastic-like [Glycine
           max]
          Length = 476

 Score =  247 bits (630), Expect = 1e-63
 Identities = 123/137 (89%), Positives = 133/137 (97%)
 Frame = -3

Query: 622 LVGMKSRGVYETPGGTILFAAVQELESLTLDRETMQVKDTLALKYAELVYAGRWFDPLRE 443
           LVGMKSRGVYETPGGTILFAA +ELESLTLDRET+QVKD+LALKYAELVYAGRWFDPLRE
Sbjct: 340 LVGMKSRGVYETPGGTILFAAARELESLTLDRETIQVKDSLALKYAELVYAGRWFDPLRE 399

Query: 442 SMDAFMEKITKDTTGSVKLKLYKGSVSVTGRTSPFSLYRQDISSFESGQIYDQADAAGFI 263
           SMDAFM+KIT+ TTGSV LKLYKGSV+VT RTSPFSLYR+DISSFESGQIYDQADAAGFI
Sbjct: 400 SMDAFMQKITETTTGSVTLKLYKGSVTVTSRTSPFSLYREDISSFESGQIYDQADAAGFI 459

Query: 262 RLYGLPMRVRAMLEKGL 212
           RLYGLP+RVRAMLE+G+
Sbjct: 460 RLYGLPVRVRAMLEQGI 476


>ref|XP_002315434.1| predicted protein [Populus trichocarpa] gi|222864474|gb|EEF01605.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  246 bits (629), Expect = 2e-63
 Identities = 125/135 (92%), Positives = 130/135 (96%)
 Frame = -3

Query: 622 LVGMKSRGVYETPGGTILFAAVQELESLTLDRETMQVKDTLALKYAELVYAGRWFDPLRE 443
           LVGMKSRGVYETPGGTILF AV+ELESLTLDRETMQVKD+LALKYAELVYAGRWFDPLRE
Sbjct: 290 LVGMKSRGVYETPGGTILFTAVRELESLTLDRETMQVKDSLALKYAELVYAGRWFDPLRE 349

Query: 442 SMDAFMEKITKDTTGSVKLKLYKGSVSVTGRTSPFSLYRQDISSFESGQIYDQADAAGFI 263
           SMDAFMEKIT+ TTGSV+LKLYKGSVSV  RTSP SLYR+DISSFESGQIYDQADAAGFI
Sbjct: 350 SMDAFMEKITETTTGSVRLKLYKGSVSVVSRTSPKSLYREDISSFESGQIYDQADAAGFI 409

Query: 262 RLYGLPMRVRAMLEK 218
           RLYGLPMRVRAMLEK
Sbjct: 410 RLYGLPMRVRAMLEK 424


>ref|XP_002521168.1| argininosuccinate synthase, putative [Ricinus communis]
           gi|223539615|gb|EEF41199.1| argininosuccinate synthase,
           putative [Ricinus communis]
          Length = 492

 Score =  246 bits (628), Expect = 2e-63
 Identities = 123/137 (89%), Positives = 131/137 (95%)
 Frame = -3

Query: 622 LVGMKSRGVYETPGGTILFAAVQELESLTLDRETMQVKDTLALKYAELVYAGRWFDPLRE 443
           LVGMKSRGVYETPGGTILF A +ELESLTLDRETMQVKD+LALKYAELVYAGRWFDPLRE
Sbjct: 356 LVGMKSRGVYETPGGTILFTAARELESLTLDRETMQVKDSLALKYAELVYAGRWFDPLRE 415

Query: 442 SMDAFMEKITKDTTGSVKLKLYKGSVSVTGRTSPFSLYRQDISSFESGQIYDQADAAGFI 263
           SMDAFMEKI++ TTGSV LKLYKGSVSVT RTSP+SLYRQDISSFESG+IYDQADAAGFI
Sbjct: 416 SMDAFMEKISEKTTGSVTLKLYKGSVSVTSRTSPYSLYRQDISSFESGKIYDQADAAGFI 475

Query: 262 RLYGLPMRVRAMLEKGL 212
           RLYGLPM+VRAMLE G+
Sbjct: 476 RLYGLPMKVRAMLENGI 492


>ref|XP_003525699.1| PREDICTED: LOW QUALITY PROTEIN: argininosuccinate synthase,
           chloroplastic-like [Glycine max]
          Length = 423

 Score =  245 bits (625), Expect = 5e-63
 Identities = 123/137 (89%), Positives = 130/137 (94%)
 Frame = -3

Query: 622 LVGMKSRGVYETPGGTILFAAVQELESLTLDRETMQVKDTLALKYAELVYAGRWFDPLRE 443
           LVGMKSRGVY TPGGTILFAA +ELESLTLDRET+QVKD+LALKYAELVYAGRWFDPLRE
Sbjct: 287 LVGMKSRGVYXTPGGTILFAAARELESLTLDRETIQVKDSLALKYAELVYAGRWFDPLRE 346

Query: 442 SMDAFMEKITKDTTGSVKLKLYKGSVSVTGRTSPFSLYRQDISSFESGQIYDQADAAGFI 263
           SMDAFM+KIT+ TTGSV LKLYKGSV+ T RTSPFSLYRQDISSFESGQIYDQADAAGFI
Sbjct: 347 SMDAFMQKITETTTGSVTLKLYKGSVTATSRTSPFSLYRQDISSFESGQIYDQADAAGFI 406

Query: 262 RLYGLPMRVRAMLEKGL 212
           RLYGLPMRVRAMLE G+
Sbjct: 407 RLYGLPMRVRAMLEHGI 423


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