BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018391
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...    71   1e-10
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    70   1e-10
gb|AFJ66197.1| hypothetical protein 7G9.16 [Boechera stricta]          69   3e-10
ref|XP_002461653.1| hypothetical protein SORBIDRAFT_02g005970 [S...    69   3e-10
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 69   4e-10

>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 30/72 (41%), Positives = 47/72 (65%)
 Frame = +3

Query: 6   FFTACWNKVGSDF*IFIHYALSHNTTTAGLNSTFICLIPKVSKPTKVEDYRPISCCNITY 185
           F+   WN +G++F + I    +      G+NST + LIPK  +  +++DYRPISCCN+ Y
Sbjct: 368 FYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEAKEMKDYRPISCCNVLY 427

Query: 186 KCIAKLIAVKMK 221
           K I+K+IA ++K
Sbjct: 428 KVISKIIANRLK 439


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 30/72 (41%), Positives = 47/72 (65%)
 Frame = +3

Query: 6   FFTACWNKVGSDF*IFIHYALSHNTTTAGLNSTFICLIPKVSKPTKVEDYRPISCCNITY 185
           FF A W  +G +F + +    +      G+NST + LIPK ++  +++DYRPISCCN+ Y
Sbjct: 480 FFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLY 539

Query: 186 KCIAKLIAVKMK 221
           K I+K+IA ++K
Sbjct: 540 KVISKIIANRLK 551


>gb|AFJ66197.1| hypothetical protein 7G9.16 [Boechera stricta]
          Length = 671

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 31/71 (43%), Positives = 44/71 (61%)
 Frame = +3

Query: 6   FFTACWNKVGSDF*IFIHYALSHNTTTAGLNSTFICLIPKVSKPTKVEDYRPISCCNITY 185
           FF A W  +G +F I       H     G+N+T + LIPKV  PT + DYRPI+CCN+ Y
Sbjct: 438 FFQASWAIIGPEFVIAFQSYFLHGFMPRGVNATTLTLIPKVEGPTTLTDYRPIACCNVIY 497

Query: 186 KCIAKLIAVKM 218
           K I+K++A ++
Sbjct: 498 KVISKILANRL 508


>ref|XP_002461653.1| hypothetical protein SORBIDRAFT_02g005970 [Sorghum bicolor]
           gi|241925030|gb|EER98174.1| hypothetical protein
           SORBIDRAFT_02g005970 [Sorghum bicolor]
          Length = 172

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/80 (40%), Positives = 48/80 (60%)
 Frame = +3

Query: 6   FFTACWNKVGSDF*IFIHYALSHNTTTAGLNSTFICLIPKVSKPTKVEDYRPISCCNITY 185
           F+   WN +G D  + +  A++  T  +G N T I +IPKV  P KV  +RPIS CN+ Y
Sbjct: 36  FYKRFWNMLGDDLVVQVLGAVNSATIPSGWNDTMIVMIPKVENPDKVAQFRPISLCNVVY 95

Query: 186 KCIAKLIAVKMKPFAADLSS 245
           K I+K++A +MK    ++ S
Sbjct: 96  KVISKMLANRMKGILEEIIS 115


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/72 (45%), Positives = 43/72 (59%)
 Frame = +3

Query: 6   FFTACWNKVGSDF*IFIHYALSHNTTTAGLNSTFICLIPKVSKPTKVEDYRPISCCNITY 185
           FF A W+  G DF   I           GLN+T + LIPK  + T + DYRPISCCN+ Y
Sbjct: 53  FFKATWSITGQDFIAAIKSFFIKGFLPKGLNATILALIPKKDEATLMRDYRPISCCNVIY 112

Query: 186 KCIAKLIAVKMK 221
           K I+K+IA ++K
Sbjct: 113 KVISKIIANRLK 124