BLASTX nr result

ID: Coptis23_contig00018388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018388
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281819.1| PREDICTED: uncharacterized protein LOC100242...   158   8e-37
ref|XP_002314751.1| predicted protein [Populus trichocarpa] gi|2...   158   8e-37
emb|CAN60832.1| hypothetical protein VITISV_004738 [Vitis vinifera]   158   8e-37
ref|XP_002312489.1| predicted protein [Populus trichocarpa] gi|2...   152   5e-35
ref|XP_003524838.1| PREDICTED: uncharacterized protein LOC100813...   145   1e-32

>ref|XP_002281819.1| PREDICTED: uncharacterized protein LOC100242197 [Vitis vinifera]
           gi|297737557|emb|CBI26758.3| unnamed protein product
           [Vitis vinifera]
          Length = 283

 Score =  158 bits (400), Expect = 8e-37
 Identities = 95/208 (45%), Positives = 121/208 (58%), Gaps = 27/208 (12%)
 Frame = -3

Query: 689 LLYDDHDHTTTSE--------------GILQNLNCLSDITNTSRMQDEDLHFSL--GSIS 558
           LLY DH+  + ++               + +N NC++ I +   +  E ++ S   G IS
Sbjct: 76  LLYTDHETNSPNDLMKTYWNMNPNCTWDLSENFNCMNQIASIGGVSAEPINGSAMSGMIS 135

Query: 557 SGEK-----RAPEEXXXXXXXXXXXXXSYMD--INKTS----NTLIARDPPYSSACDRRA 411
             E      + PEE             SY +  +N  S    +TL + DP   S      
Sbjct: 136 EEEPTFADMKTPEETVSALEALDSSSSSYKEYSVNTKSVSEKDTLCSIDPLPPSTGGDHK 195

Query: 410 SRRKFAKGVVYPFAVVKPGGFEGDVTLNDINERILMPPTRPVKHPVGDFASRPSISPDGP 231
            ++K    VVYPFAVVKPGG +GD+TLNDINERILMPPTRPV+HPVGDFASRP +SPDGP
Sbjct: 196 KKKKLITRVVYPFAVVKPGGLDGDMTLNDINERILMPPTRPVRHPVGDFASRPFVSPDGP 255

Query: 230 GLSGKDVVSFIRIQTQGRGTITIVRTRG 147
           GLSGK VV+  RI TQGRGTITI+RT+G
Sbjct: 256 GLSGKAVVALTRIHTQGRGTITIIRTKG 283


>ref|XP_002314751.1| predicted protein [Populus trichocarpa] gi|222863791|gb|EEF00922.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  158 bits (400), Expect = 8e-37
 Identities = 85/171 (49%), Positives = 108/171 (63%), Gaps = 6/171 (3%)
 Frame = -3

Query: 641 QNLNCLSDITNTSRMQDEDLHFSLGSISS-----GEKRAPEEXXXXXXXXXXXXXS-YMD 480
           +N +CLS IT      DE +  S+ + S       E + PEE             S Y D
Sbjct: 107 ENFSCLSHITGIRGTSDEPMTTSMSNTSEEANVISEIKTPEEGISAPETLDYSSSSSYKD 166

Query: 479 INKTSNTLIARDPPYSSACDRRASRRKFAKGVVYPFAVVKPGGFEGDVTLNDINERILMP 300
           +  T++     + P+SS  D    +R+    VVYPFA+VKPGG EGD+T+NDINERILMP
Sbjct: 167 LAGTNSIFEKDNIPHSSDDDGEKRKRRLGTRVVYPFALVKPGGLEGDMTINDINERILMP 226

Query: 299 PTRPVKHPVGDFASRPSISPDGPGLSGKDVVSFIRIQTQGRGTITIVRTRG 147
           PTRPV+HPVGDFA +P +S DGPGLSGK VV+  R+ TQGRGTITI+RT+G
Sbjct: 227 PTRPVRHPVGDFACKPCVSADGPGLSGKAVVALTRVHTQGRGTITIIRTKG 277


>emb|CAN60832.1| hypothetical protein VITISV_004738 [Vitis vinifera]
          Length = 441

 Score =  158 bits (400), Expect = 8e-37
 Identities = 95/208 (45%), Positives = 121/208 (58%), Gaps = 27/208 (12%)
 Frame = -3

Query: 689 LLYDDHDHTTTSE--------------GILQNLNCLSDITNTSRMQDEDLHFSL--GSIS 558
           LLY DH+  + ++               + +N NC++ I +   +  E ++ S   G IS
Sbjct: 234 LLYTDHETNSPNDLMKTYWNMNPNCTWDLSENFNCMNQIASIGGVSAEPINGSAMSGMIS 293

Query: 557 SGEK-----RAPEEXXXXXXXXXXXXXSYMD--INKTS----NTLIARDPPYSSACDRRA 411
             E      + PEE             SY +  +N  S    +TL + DP   S      
Sbjct: 294 EEEPTFADMKTPEETVSALEALDSSSSSYKEYSVNTKSVSEKDTLCSIDPLPPSTGGDHK 353

Query: 410 SRRKFAKGVVYPFAVVKPGGFEGDVTLNDINERILMPPTRPVKHPVGDFASRPSISPDGP 231
            ++K    VVYPFAVVKPGG +GD+TLNDINERILMPPTRPV+HPVGDFASRP +SPDGP
Sbjct: 354 KKKKLITRVVYPFAVVKPGGLDGDMTLNDINERILMPPTRPVRHPVGDFASRPFVSPDGP 413

Query: 230 GLSGKDVVSFIRIQTQGRGTITIVRTRG 147
           GLSGK VV+  RI TQGRGTITI+RT+G
Sbjct: 414 GLSGKAVVALTRIHTQGRGTITIIRTKG 441


>ref|XP_002312489.1| predicted protein [Populus trichocarpa] gi|222852309|gb|EEE89856.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  152 bits (385), Expect = 5e-35
 Identities = 84/171 (49%), Positives = 106/171 (61%), Gaps = 6/171 (3%)
 Frame = -3

Query: 641 QNLNCLSDITNTSRMQDEDLHFSLGSISS-----GEKRAP-EEXXXXXXXXXXXXXSYMD 480
           +N +C+S IT      DE +  S+ + S       E   P E+             SY D
Sbjct: 91  ENFSCMSHITGFRGPSDELVSTSVSNTSDEANVISEITTPGEKISAPETLDYSSSSSYKD 150

Query: 479 INKTSNTLIARDPPYSSACDRRASRRKFAKGVVYPFAVVKPGGFEGDVTLNDINERILMP 300
           +  T++     + P+S+       R+  A  VVYPFA+VKPGG EGD+T+NDINERILMP
Sbjct: 151 LAATNSIFEKENSPHSTDDHENKRRKTVATRVVYPFALVKPGGVEGDMTINDINERILMP 210

Query: 299 PTRPVKHPVGDFASRPSISPDGPGLSGKDVVSFIRIQTQGRGTITIVRTRG 147
           PTRPV+HPVGDFA RP +S DGPGLSGK VV+  RI TQGRGTITI+RT+G
Sbjct: 211 PTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTRIHTQGRGTITIIRTKG 261


>ref|XP_003524838.1| PREDICTED: uncharacterized protein LOC100813284 [Glycine max]
          Length = 275

 Score =  145 bits (365), Expect = 1e-32
 Identities = 82/167 (49%), Positives = 99/167 (59%), Gaps = 3/167 (1%)
 Frame = -3

Query: 638 NLNCLSDITNTSRMQDEDLHFSLG---SISSGEKRAPEEXXXXXXXXXXXXXSYMDINKT 468
           N  C++ I     + DE +  S     +I   + + PEE             SY    K 
Sbjct: 113 NFYCMNQIERFCGISDEHISTSRSEEANILLADTKTPEETISASESLNSSSSSY----KQ 168

Query: 467 SNTLIARDPPYSSACDRRASRRKFAKGVVYPFAVVKPGGFEGDVTLNDINERILMPPTRP 288
             T    DP  +   +     +K    VVYPFA+VKPGG EGDVTLNDINERILMPPTRP
Sbjct: 169 PATCKTTDPTVAPTENDDMRNKKVVTRVVYPFAMVKPGGREGDVTLNDINERILMPPTRP 228

Query: 287 VKHPVGDFASRPSISPDGPGLSGKDVVSFIRIQTQGRGTITIVRTRG 147
           V+HPVGDFA RP +S +GPGLSGK VV+  RI TQGRGTITI+RT+G
Sbjct: 229 VRHPVGDFACRPCVSAEGPGLSGKAVVALTRIHTQGRGTITIIRTKG 275


Top