BLASTX nr result

ID: Coptis23_contig00018378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018378
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK00354.1| predicted protein [Hordeum vulgare subsp. vulgare]     54   7e-11
ref|NP_190792.2| uncharacterized protein [Arabidopsis thaliana] ...    50   3e-09
emb|CAC07915.1| putative protein [Arabidopsis thaliana]                50   3e-09
gb|EAY76552.1| hypothetical protein OsI_04497 [Oryza sativa Indi...    45   6e-09
ref|XP_002877850.1| hypothetical protein ARALYDRAFT_323774 [Arab...    47   9e-09

>dbj|BAK00354.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 691

 Score = 53.5 bits (127), Expect(2) = 7e-11
 Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
 Frame = +1

Query: 133 QKDPSRELQDRADELAKRVVE---QLT*VS*QRKKAEKATAEVLAILESNGISDISE 294
           ++  SR  +DRAD+LA RV E   QL  V+ QR++AE+A AEVLAIL+S G SD ++
Sbjct: 23  ERSVSRAAKDRADQLANRVAELEEQLRSVTAQRREAERAAAEVLAILDSQGFSDAAD 79



 Score = 38.1 bits (87), Expect(2) = 7e-11
 Identities = 18/28 (64%), Positives = 24/28 (85%)
 Frame = +3

Query: 78  VMEESTSMTIEFLCARLLSERSISRTAR 161
           V + +T+MTI+FL ARLLSERS+SR A+
Sbjct: 4   VADAATAMTIDFLRARLLSERSVSRAAK 31


>ref|NP_190792.2| uncharacterized protein [Arabidopsis thaliana]
           gi|26450513|dbj|BAC42370.1| unknown protein [Arabidopsis
           thaliana] gi|332645398|gb|AEE78919.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 680

 Score = 50.1 bits (118), Expect(2) = 3e-09
 Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
 Frame = +1

Query: 145 SRELQDRADELAKRVVE---QLT*VS*QRKKAEKATAEVLAILESNGISDISE 294
           S+  + + D LA +V E   QL  VS QRKKAE+ATA+VLAILE NG +D+S+
Sbjct: 39  SKSARAKLDGLADKVAELEEQLKIVSLQRKKAEQATADVLAILEENGYNDVSD 91



 Score = 36.2 bits (82), Expect(2) = 3e-09
 Identities = 16/26 (61%), Positives = 24/26 (92%)
 Frame = +3

Query: 84  EESTSMTIEFLCARLLSERSISRTAR 161
           ++ TS+TIEFL ARLL+ER++S++AR
Sbjct: 18  QDPTSVTIEFLRARLLAERAVSKSAR 43


>emb|CAC07915.1| putative protein [Arabidopsis thaliana]
          Length = 667

 Score = 50.1 bits (118), Expect(2) = 3e-09
 Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
 Frame = +1

Query: 145 SRELQDRADELAKRVVE---QLT*VS*QRKKAEKATAEVLAILESNGISDISE 294
           S+  + + D LA +V E   QL  VS QRKKAE+ATA+VLAILE NG +D+S+
Sbjct: 39  SKSARAKLDGLADKVAELEEQLKIVSLQRKKAEQATADVLAILEENGYNDVSD 91



 Score = 36.2 bits (82), Expect(2) = 3e-09
 Identities = 16/26 (61%), Positives = 24/26 (92%)
 Frame = +3

Query: 84  EESTSMTIEFLCARLLSERSISRTAR 161
           ++ TS+TIEFL ARLL+ER++S++AR
Sbjct: 18  QDPTSVTIEFLRARLLAERAVSKSAR 43


>gb|EAY76552.1| hypothetical protein OsI_04497 [Oryza sativa Indica Group]
          Length = 539

 Score = 45.4 bits (106), Expect(2) = 6e-09
 Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
 Frame = +1

Query: 133 QKDPSRELQDRADELAKRVVE---QLT*VS*QRKKAEKATAEVLAILESNG 276
           ++  SR  + RAD+LAKRV E   Q+  V+ QR++AE+A  EVL ILES+G
Sbjct: 19  ERSVSRAAKGRADQLAKRVAELEEQVQAVTAQRRQAERAATEVLGILESHG 69



 Score = 39.7 bits (91), Expect(2) = 6e-09
 Identities = 18/27 (66%), Positives = 24/27 (88%)
 Frame = +3

Query: 81  MEESTSMTIEFLCARLLSERSISRTAR 161
           M +ST+MT++FL ARLLSERS+SR A+
Sbjct: 1   MADSTAMTVDFLRARLLSERSVSRAAK 27


>ref|XP_002877850.1| hypothetical protein ARALYDRAFT_323774 [Arabidopsis lyrata subsp.
           lyrata] gi|297323688|gb|EFH54109.1| hypothetical protein
           ARALYDRAFT_323774 [Arabidopsis lyrata subsp. lyrata]
          Length = 688

 Score = 46.6 bits (109), Expect(2) = 9e-09
 Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
 Frame = +1

Query: 145 SRELQDRADELAKRVVE---QLT*VS*QRKKAEKATAEVLAILESNGISD 285
           S+  + + D LA +V E   QL  VS QRKKAE+ATA+VLAILE NG +D
Sbjct: 39  SKSARAKLDGLADKVAELEEQLKIVSLQRKKAEQATADVLAILEENGYTD 88



 Score = 37.7 bits (86), Expect(2) = 9e-09
 Identities = 17/26 (65%), Positives = 24/26 (92%)
 Frame = +3

Query: 84  EESTSMTIEFLCARLLSERSISRTAR 161
           ++ TSMTIEFL ARLL+ER++S++AR
Sbjct: 18  QDPTSMTIEFLRARLLAERAVSKSAR 43


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