BLASTX nr result

ID: Coptis23_contig00018377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00018377
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303119.1| predicted protein [Populus trichocarpa] gi|2...   202   4e-50
emb|CBI37166.3| unnamed protein product [Vitis vinifera]              184   8e-45
ref|XP_002271181.1| PREDICTED: uncharacterized protein LOC100256...   184   8e-45
ref|XP_002526564.1| conserved hypothetical protein [Ricinus comm...   172   2e-41
gb|AFK34817.1| unknown [Medicago truncatula]                          147   9e-34

>ref|XP_002303119.1| predicted protein [Populus trichocarpa] gi|222844845|gb|EEE82392.1|
           predicted protein [Populus trichocarpa]
          Length = 983

 Score =  202 bits (513), Expect = 4e-50
 Identities = 108/187 (57%), Positives = 125/187 (66%), Gaps = 1/187 (0%)
 Frame = -2

Query: 560 WKVAKKRSKPPLIQQKENTNLDQELQIPFSLEPIFK-VXXXXXXXXXXXXXXXKEELVVD 384
           WK+ K + KP L QQKEN  LDQE ++ FS EP FK +                +E+ VD
Sbjct: 235 WKIVKAKGKPSLRQQKENLTLDQEPRMSFSSEPGFKELAFSFKAKAGQCNKKPDQEIAVD 294

Query: 383 TSLSNWLGSSETTPSTKTSNLSIGNESAERSMSQRSNSPRSHEDRPILGALTVEELRHFS 204
           TSLSNWLGSSE TP  K  ++ +   + E+SMSQ SNSPRS +DRPILGALTVEEL+H S
Sbjct: 295 TSLSNWLGSSECTPVNKPGSIGLDAIAPEKSMSQGSNSPRSFDDRPILGALTVEELKHLS 354

Query: 203 ATXXXXXXXXXXPDEMPILGTVGSYWSHTGQAVDXXXXXXSYKGIPNTTSKYREDKRVNW 24
           AT          PDEMPI+GTVG+YW+H G   D      SYKGIPNTTSKYREDKRVNW
Sbjct: 355 ATSSSRRSPSRSPDEMPIIGTVGTYWNHGGSGKD-SGSASSYKGIPNTTSKYREDKRVNW 413

Query: 23  HSTPFET 3
           HSTPFET
Sbjct: 414 HSTPFET 420


>emb|CBI37166.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  184 bits (467), Expect = 8e-45
 Identities = 102/187 (54%), Positives = 121/187 (64%), Gaps = 2/187 (1%)
 Frame = -2

Query: 560 WKVAKKRSKPPLIQQKENTNLDQEL-QIPFSLEPIFKVXXXXXXXXXXXXXXXKEELVVD 384
           WK  K +  PPL  QKEN   D+E  ++ FS+EP FK                 +E+ V+
Sbjct: 231 WKAVKGKGTPPLKLQKENLTSDKEPPRLSFSMEPNFKQSSFSNKSKINEPENLNQEIAVN 290

Query: 383 TSLSNWLGSSETTPSTKTSNLSIGNE-SAERSMSQRSNSPRSHEDRPILGALTVEELRHF 207
            SLS WL SSETTP+ KTS + + +  S ++  S  SNSPRS EDRPILGALT+EE+R F
Sbjct: 291 ASLSTWLVSSETTPTNKTSPIGVVDTISYQKGASYTSNSPRSQEDRPILGALTLEEIRQF 350

Query: 206 SATXXXXXXXXXXPDEMPILGTVGSYWSHTGQAVDXXXXXXSYKGIPNTTSKYREDKRVN 27
           SA+          PD+MPILGTVG+YWSHTG A D      SYKGIPNTTSKYREDKRVN
Sbjct: 351 SASNSPRRSPTRSPDDMPILGTVGTYWSHTGPAKD--SDSASYKGIPNTTSKYREDKRVN 408

Query: 26  WHSTPFE 6
           WHSTPFE
Sbjct: 409 WHSTPFE 415


>ref|XP_002271181.1| PREDICTED: uncharacterized protein LOC100256663 [Vitis vinifera]
          Length = 451

 Score =  184 bits (467), Expect = 8e-45
 Identities = 102/187 (54%), Positives = 121/187 (64%), Gaps = 2/187 (1%)
 Frame = -2

Query: 560 WKVAKKRSKPPLIQQKENTNLDQEL-QIPFSLEPIFKVXXXXXXXXXXXXXXXKEELVVD 384
           WK  K +  PPL  QKEN   D+E  ++ FS+EP FK                 +E+ V+
Sbjct: 253 WKAVKGKGTPPLKLQKENLTSDKEPPRLSFSMEPNFKQSSFSNKSKINEPENLNQEIAVN 312

Query: 383 TSLSNWLGSSETTPSTKTSNLSIGNE-SAERSMSQRSNSPRSHEDRPILGALTVEELRHF 207
            SLS WL SSETTP+ KTS + + +  S ++  S  SNSPRS EDRPILGALT+EE+R F
Sbjct: 313 ASLSTWLVSSETTPTNKTSPIGVVDTISYQKGASYTSNSPRSQEDRPILGALTLEEIRQF 372

Query: 206 SATXXXXXXXXXXPDEMPILGTVGSYWSHTGQAVDXXXXXXSYKGIPNTTSKYREDKRVN 27
           SA+          PD+MPILGTVG+YWSHTG A D      SYKGIPNTTSKYREDKRVN
Sbjct: 373 SASNSPRRSPTRSPDDMPILGTVGTYWSHTGPAKD--SDSASYKGIPNTTSKYREDKRVN 430

Query: 26  WHSTPFE 6
           WHSTPFE
Sbjct: 431 WHSTPFE 437


>ref|XP_002526564.1| conserved hypothetical protein [Ricinus communis]
           gi|223534125|gb|EEF35842.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 451

 Score =  172 bits (437), Expect = 2e-41
 Identities = 94/186 (50%), Positives = 116/186 (62%)
 Frame = -2

Query: 560 WKVAKKRSKPPLIQQKENTNLDQELQIPFSLEPIFKVXXXXXXXXXXXXXXXKEELVVDT 381
           WK  K +  P L QQKEN  L QE +  FS EP F+                 +E+ VD 
Sbjct: 250 WKAVKAKGTPLLKQQKENHTLGQEPRTSFSSEPSFRELSFSFKAKSEQSKKANQEVAVDA 309

Query: 380 SLSNWLGSSETTPSTKTSNLSIGNESAERSMSQRSNSPRSHEDRPILGALTVEELRHFSA 201
           SLSNWLGSSE+TP +K S       + E+S +  SNSP+S EDRPILGALT+EE++ FSA
Sbjct: 310 SLSNWLGSSESTPISKPSTNGFDTFTPEKSTTVGSNSPKSFEDRPILGALTMEEIKQFSA 369

Query: 200 TXXXXXXXXXXPDEMPILGTVGSYWSHTGQAVDXXXXXXSYKGIPNTTSKYREDKRVNWH 21
           +          PDEMPI+GTVG+YW+ +  +        S+KGIPNTTSKYREDKRVNW+
Sbjct: 370 SSSPRKSPSRSPDEMPIIGTVGTYWNDSVTS-KHSDSASSFKGIPNTTSKYREDKRVNWY 428

Query: 20  STPFET 3
           STPFET
Sbjct: 429 STPFET 434


>gb|AFK34817.1| unknown [Medicago truncatula]
          Length = 202

 Score =  147 bits (372), Expect = 9e-34
 Identities = 91/190 (47%), Positives = 114/190 (60%), Gaps = 4/190 (2%)
 Frame = -2

Query: 560 WKVAKKRSKPPLIQQKEN-TNLDQELQIPFSLEPIFKVXXXXXXXXXXXXXXXKEELVVD 384
           WKV K +  P    QKEN  + + E ++ F ++ I K                 +E+ VD
Sbjct: 4   WKVVKAKRTPRSRPQKENFVSSNHESEVSFGVKEILKAGTPKKLN---------QEIPVD 54

Query: 383 TSLSNWLGSSETTPSTKTSNLSIGNE--SAERSMSQR-SNSPRSHEDRPILGALTVEELR 213
            SLSNWLGSS TT     + L  G    + +RS+SQ+ SNS  S EDRPILGALT+EE++
Sbjct: 55  ASLSNWLGSSGTTTPVNKACLYAGGGIGTPDRSISQQGSNSVISLEDRPILGALTMEEIK 114

Query: 212 HFSATXXXXXXXXXXPDEMPILGTVGSYWSHTGQAVDXXXXXXSYKGIPNTTSKYREDKR 33
            FSAT          PDEMPI+GTVGSYW+    A +      S+KGIPNTTSKYREDK+
Sbjct: 115 QFSATSSPRKSPCKSPDEMPIIGTVGSYWN----ANEGSGSPSSFKGIPNTTSKYREDKK 170

Query: 32  VNWHSTPFET 3
           VNWH+TPFET
Sbjct: 171 VNWHATPFET 180


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